RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 SMR3AQ99954 134 aa0.21□□□□□ -2.38
AP3S1-209ENST00000640413 PRADC1Q9BSG0 188 aa0.21□□□□□ -2.38
AP3S1-209ENST00000640413 NOSIPQ9Y314 301 aaKnown RBP0.21□□□□□ -2.38
AP3S1-209ENST00000640413 KCPQ6ZWJ8 1503 aa0.21□□□□□ -2.38
AP3S1-209ENST00000640413 NBEAL2Q6ZNJ1 2754 aa0.21□□□□□ -2.38
AP3S1-209ENST00000640413 CHD6Q8TD26 2715 aa0.21□□□□□ -2.38
AP3S1-209ENST00000640413 GCN1Q92616 2671 aaKnown RBP0.2□□□□□ -2.38
AP3S1-209ENST00000640413 RTL1A6NKG5 1358 aa0.2□□□□□ -2.38
AP3S1-209ENST00000640413 USP9XQ93008 2570 aaPredicted RBP0.2□□□□□ -2.38
AP3S1-209ENST00000640413 hADV38S2A0JD32 116 aa0.2□□□□□ -2.38
AP3S1-209ENST00000640413 ZNF682O95780 498 aa0.2□□□□□ -2.38
AP3S1-209ENST00000640413 PRH1P02810 166 aa0.2□□□□□ -2.38
AP3S1-209ENST00000640413 SRP14P37108 136 aaKnown RBP0.2□□□□□ -2.38
AP3S1-209ENST00000640413 C4orf22Q6V702 233 aa0.2□□□□□ -2.38
AP3S1-209ENST00000640413 TEN1Q86WV5 123 aa0.2□□□□□ -2.38
AP3S1-209ENST00000640413 OR5D14Q8NGL3 314 aa0.2□□□□□ -2.38
AP3S1-209ENST00000640413 SLC25A40Q8TBP6 338 aa0.2□□□□□ -2.38
AP3S1-209ENST00000640413 ADAT3Q96EY9 351 aaPredicted RBP0.2□□□□□ -2.38
AP3S1-209ENST00000640413 TP53RKQ96S44 253 aa0.2□□□□□ -2.38
AP3S1-209ENST00000640413 LINC00467Q9BRT7 94 aa0.2□□□□□ -2.38
AP3S1-209ENST00000640413 TRIM4Q9C037 500 aa0.2□□□□□ -2.38
AP3S1-209ENST00000640413 MED29Q9NX70 200 aa0.2□□□□□ -2.38
AP3S1-209ENST00000640413 TVP23BQ9NYZ1 205 aa0.2□□□□□ -2.38
AP3S1-209ENST00000640413 IDI2-AS1Q9NZ38 188 aa0.2□□□□□ -2.38
AP3S1-209ENST00000640413 COL6A5A8TX70 2615 aa0.2□□□□□ -2.38
AP3S1-209ENST00000640413 PLXND1Q9Y4D7 1925 aa0.2□□□□□ -2.38
AP3S1-209ENST00000640413 ZNF106Q9H2Y7 1883 aaKnown RBP0.2□□□□□ -2.38
AP3S1-209ENST00000640413 MGAM2Q2M2H8 2515 aa0.2□□□□□ -2.38
AP3S1-209ENST00000640413 CASP8AP2Q9UKL3 1982 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 EPG5Q9HCE0 2579 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 SETXQ7Z333 2677 aaKnown RBP0.19□□□□□ -2.38
AP3S1-209ENST00000640413 SMIM9A6NGZ8 99 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 F8W1H4 67 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 H3BRM9 83 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 NUPR1O60356 82 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 C8GP07360 202 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 KDELR1P24390 212 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 CEBPGP53567 150 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 SPINK9Q5DT21 86 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 TSKUQ8WUA8 353 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 CANT1Q8WVQ1 401 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 PSMF1Q92530 271 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 LINC00052Q96N35 136 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 PRRT1Q99946 306 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 PSTPIP2Q9H939 334 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 TMEM138Q9NPI0 162 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 PCTPQ9UKL6 214 aa0.19□□□□□ -2.38
AP3S1-209ENST00000640413 DMBT1Q9UGM3 2413 aaPredicted RBP0.19□□□□□ -2.38
AP3S1-209ENST00000640413 MYO18BQ8IUG5 2567 aa0.18□□□□□ -2.38
AP3S1-209ENST00000640413 MED12Q93074 2177 aa0.18□□□□□ -2.38
AP3S1-209ENST00000640413 TRGV10A0A0A0MS01 117 aa0.18□□□□□ -2.38
AP3S1-209ENST00000640413 M0R378 163 aa0.18□□□□□ -2.38
AP3S1-209ENST00000640413 NDUFB3O43676 98 aa0.18□□□□□ -2.38
AP3S1-209ENST00000640413 PDE6DO43924 150 aa0.18□□□□□ -2.38
AP3S1-209ENST00000640413 RPP14O95059 124 aaKnown RBP0.18□□□□□ -2.38
AP3S1-209ENST00000640413 LYPLA2O95372 231 aa0.18□□□□□ -2.38
AP3S1-209ENST00000640413 RPS17P08708 135 aaKnown RBP0.18□□□□□ -2.38
AP3S1-209ENST00000640413 KRR1Q13601 381 aaKnown RBP0.18□□□□□ -2.38
AP3S1-209ENST00000640413 IMPG1Q17R60 797 aa0.18□□□□□ -2.38
AP3S1-209ENST00000640413 IAH1Q2TAA2 248 aaPredicted RBP0.18□□□□□ -2.38
AP3S1-209ENST00000640413 KRTAP26-1Q6PEX3 210 aa0.18□□□□□ -2.38
AP3S1-209ENST00000640413 Q8IYB0 196 aa0.18□□□□□ -2.38
AP3S1-209ENST00000640413 ZNF431Q8TF32 576 aaPredicted RBP0.18□□□□□ -2.38
AP3S1-209ENST00000640413 UQCC1Q9NVA1 299 aa0.18□□□□□ -2.38
AP3S1-209ENST00000640413 PLAC8Q9NZF1 115 aa0.18□□□□□ -2.38
AP3S1-209ENST00000640413 CHCHD2Q9Y6H1 151 aaPredicted RBP0.18□□□□□ -2.38
AP3S1-209ENST00000640413 PIK3C2GO75747 1445 aa0.18□□□□□ -2.38
AP3S1-209ENST00000640413 FAM208BQ5VWN6 2430 aa0.18□□□□□ -2.38
AP3S1-209ENST00000640413 TLN1Q9Y490 2541 aaKnown RBP0.18□□□□□ -2.38
AP3S1-209ENST00000640413 PDZD2O15018 2839 aa0.18□□□□□ -2.38
AP3S1-209ENST00000640413 ARHGEF11O15085 1522 aa0.18□□□□□ -2.38
AP3S1-209ENST00000640413 PHRF1Q9P1Y6 1649 aaKnown RBP0.17□□□□□ -2.38
AP3S1-209ENST00000640413 MUC12Q9UKN1 5478 aa0.17□□□□□ -2.38
AP3S1-209ENST00000640413 ALPK3Q96L96 1907 aa0.17□□□□□ -2.38
AP3S1-209ENST00000640413 TRAV10A0A0B4J240 114 aa0.17□□□□□ -2.38
AP3S1-209ENST00000640413 SPINK7P58062 85 aa0.17□□□□□ -2.38
AP3S1-209ENST00000640413 MYL5Q02045 173 aa0.17□□□□□ -2.38
AP3S1-209ENST00000640413 EDDM3AQ14507 147 aa0.17□□□□□ -2.38
AP3S1-209ENST00000640413 BCL2L15Q5TBC7 163 aa0.17□□□□□ -2.38
AP3S1-209ENST00000640413 PTRHD1Q6GMV3 140 aaKnown RBP0.17□□□□□ -2.38
AP3S1-209ENST00000640413 Q6Q795 121 aa0.17□□□□□ -2.38
AP3S1-209ENST00000640413 EXOC3-AS1Q8N2X6 119 aa0.17□□□□□ -2.38
AP3S1-209ENST00000640413 OR51A2Q8NGJ7 313 aa0.17□□□□□ -2.38
AP3S1-209ENST00000640413 OR10AC1Q8NH08 325 aa0.17□□□□□ -2.38
AP3S1-209ENST00000640413 YPEL2Q96QA6 119 aa0.17□□□□□ -2.38
AP3S1-209ENST00000640413 SLC25A21Q9BQT8 299 aaPredicted RBP0.17□□□□□ -2.38
AP3S1-209ENST00000640413 GLTPQ9NZD2 209 aa0.17□□□□□ -2.38
AP3S1-209ENST00000640413 LY96Q9Y6Y9 160 aa0.17□□□□□ -2.38
AP3S1-209ENST00000640413 ITPR3Q14573 2671 aa0.17□□□□□ -2.38
AP3S1-209ENST00000640413 NAV3Q8IVL0 2385 aa0.17□□□□□ -2.38
AP3S1-209ENST00000640413 USH2AO75445 5202 aa0.17□□□□□ -2.38
AP3S1-209ENST00000640413 CECR2Q9BXF3 1484 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 ARHGEF28Q8N1W1 1705 aaKnown RBP0.16□□□□□ -2.38
AP3S1-209ENST00000640413 MYO9AB2RTY4 2548 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 SCN10AQ9Y5Y9 1956 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 NCOA1Q15788 1441 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 A0A087WUJ7 227 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 A0A0D9SG42 100 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 NUPR2A6NF83 97 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 A8MWV9 139 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms