RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 DUSP14O95147 198 aaKnown RBP15.17■□□□□ 0.02
SCARB2-213ENST00000638680 ZFP36L1Q07352 338 aaKnown RBP15.17■□□□□ 0.02
SCARB2-213ENST00000638680 MCRIP2Q9BUT9 160 aaKnown RBP15.17■□□□□ 0.02
SCARB2-213ENST00000638680 PRTN3P24158 256 aa15.17■□□□□ 0.02
SCARB2-213ENST00000638680 SPSB3Q6PJ21 355 aa15.17■□□□□ 0.02
SCARB2-213ENST00000638680 TRGV9Q99603 122 aa15.17■□□□□ 0.02
SCARB2-213ENST00000638680 C15orf62A8K5M9 175 aa15.16■□□□□ 0.02
SCARB2-213ENST00000638680 Q6P435 159 aa15.16■□□□□ 0.02
SCARB2-213ENST00000638680 STHQ8IWL8 128 aa15.16■□□□□ 0.02
SCARB2-213ENST00000638680 WNK3Q9BYP7 1800 aa15.16■□□□□ 0.02
SCARB2-213ENST00000638680 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.16■□□□□ 0.02
SCARB2-213ENST00000638680 TMEM155Q4W5P6 130 aa15.16■□□□□ 0.02
SCARB2-213ENST00000638680 SRSF6Q13247 344 aaKnown RBP15.16■□□□□ 0.02
SCARB2-213ENST00000638680 LINC01559Q495D7 138 aa15.16■□□□□ 0.02
SCARB2-213ENST00000638680 SPAG8Q99932 426 aaPredicted RBP15.16■□□□□ 0.02
SCARB2-213ENST00000638680 LINC00527Q9UJ94 153 aa15.16■□□□□ 0.02
SCARB2-213ENST00000638680 TRBV6-6A0A0A6YYG2 114 aa15.16■□□□□ 0.02
SCARB2-213ENST00000638680 HTN3P15516 51 aa15.15■□□□□ 0.02
SCARB2-213ENST00000638680 ATXN8Q156A1 80 aa15.15■□□□□ 0.02
SCARB2-213ENST00000638680 TRGV11A0A075B6L2 103 aa15.15■□□□□ 0.02
SCARB2-213ENST00000638680 A0A1B0GWJ7 208 aa15.15■□□□□ 0.02
SCARB2-213ENST00000638680 NDUFS8O00217 210 aa15.15■□□□□ 0.02
SCARB2-213ENST00000638680 Q6ZRM9 215 aa15.15■□□□□ 0.02
SCARB2-213ENST00000638680 GFRA3O60609 400 aa15.15■□□□□ 0.02
SCARB2-213ENST00000638680 KIR3DS1Q14943 382 aa15.15■□□□□ 0.02
SCARB2-213ENST00000638680 MRPL52Q86TS9 123 aaKnown RBP15.15■□□□□ 0.02
SCARB2-213ENST00000638680 RNASE6Q93091 150 aaKnown RBP15.15■□□□□ 0.02
SCARB2-213ENST00000638680 RALGAPA1Q6GYQ0 2036 aa15.15■□□□□ 0.02
SCARB2-213ENST00000638680 THBDP07204 575 aa15.15■□□□□ 0.02
SCARB2-213ENST00000638680 ESDP10768 282 aa15.15■□□□□ 0.02
SCARB2-213ENST00000638680 ICE1Q9Y2F5 2266 aa15.15■□□□□ 0.02
SCARB2-213ENST00000638680 IGHV1-8P0DP01 117 aa15.14■□□□□ 0.01
SCARB2-213ENST00000638680 ZFAND6Q6FIF0 208 aa15.14■□□□□ 0.01
SCARB2-213ENST00000638680 TMEM8BA6NDV4 472 aa15.14■□□□□ 0.01
SCARB2-213ENST00000638680 KLF17Q5JT82 389 aaPredicted RBP15.14■□□□□ 0.01
SCARB2-213ENST00000638680 IGHV1-3A0A0C4DH29 117 aa15.14■□□□□ 0.01
SCARB2-213ENST00000638680 POLR3KQ9Y2Y1 108 aaPredicted RBP15.14■□□□□ 0.01
SCARB2-213ENST00000638680 IL18BPO95998 194 aa15.14■□□□□ 0.01
SCARB2-213ENST00000638680 PSG3Q16557 428 aa15.14■□□□□ 0.01
SCARB2-213ENST00000638680 Q8TAT8 98 aa15.14■□□□□ 0.01
SCARB2-213ENST00000638680 FREM3P0C091 2139 aa15.14■□□□□ 0.01
SCARB2-213ENST00000638680 GAGE2BQ13066 116 aa15.14■□□□□ 0.01
SCARB2-213ENST00000638680 C15orf32Q32M92 178 aa15.14■□□□□ 0.01
SCARB2-213ENST00000638680 GAGE2EQ4V326 116 aa15.14■□□□□ 0.01
SCARB2-213ENST00000638680 ZNF329Q86UD4 541 aa15.14■□□□□ 0.01
SCARB2-213ENST00000638680 GAGE2DQ9UEU5 116 aa15.14■□□□□ 0.01
SCARB2-213ENST00000638680 TMEM238C9JI98 176 aa15.13■□□□□ 0.01
SCARB2-213ENST00000638680 H0YJW9 148 aa15.13■□□□□ 0.01
SCARB2-213ENST00000638680 SLC25A20O43772 301 aa15.13■□□□□ 0.01
SCARB2-213ENST00000638680 TRAV8-1A0A0A6YYK1 113 aa15.13■□□□□ 0.01
SCARB2-213ENST00000638680 VDAC2P45880 294 aaPredicted RBP15.13■□□□□ 0.01
SCARB2-213ENST00000638680 C20orf204Q6ZNR8 217 aa15.13■□□□□ 0.01
SCARB2-213ENST00000638680 A8MWP6 167 aa15.13■□□□□ 0.01
SCARB2-213ENST00000638680 TET1Q8NFU7 2136 aa15.12■□□□□ 0.01
SCARB2-213ENST00000638680 FHL1Q13642 323 aa15.12■□□□□ 0.01
SCARB2-213ENST00000638680 GTSF1LQ9H1H1 148 aa15.12■□□□□ 0.01
SCARB2-213ENST00000638680 SMKR1H3BMG3 65 aa15.12■□□□□ 0.01
SCARB2-213ENST00000638680 TP53BP1Q12888 1972 aaPredicted RBP15.12■□□□□ 0.01
SCARB2-213ENST00000638680 Q6ZS49 121 aa15.12■□□□□ 0.01
SCARB2-213ENST00000638680 A0A1B0GUS0 222 aa15.11■□□□□ 0.01
SCARB2-213ENST00000638680 TMEM158Q8WZ71 300 aa15.11■□□□□ 0.01
SCARB2-213ENST00000638680 C11orf68Q9H3H3 251 aaKnown RBP15.11■□□□□ 0.01
SCARB2-213ENST00000638680 TRAV41A0A0B4J266 112 aa15.11■□□□□ 0.01
SCARB2-213ENST00000638680 GGTLC3B5MD39 225 aa15.11■□□□□ 0.01
SCARB2-213ENST00000638680 ZNF474Q6S9Z5 364 aaPredicted RBP15.11■□□□□ 0.01
SCARB2-213ENST00000638680 TMEM190Q8WZ59 177 aa15.11■□□□□ 0.01
SCARB2-213ENST00000638680 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.11■□□□□ 0.01
SCARB2-213ENST00000638680 LINC01549A6NIU2 74 aa15.11■□□□□ 0.01
SCARB2-213ENST00000638680 IGFL4Q6B9Z1 124 aa15.11■□□□□ 0.01
SCARB2-213ENST00000638680 PLSCR4Q9NRQ2 329 aa15.11■□□□□ 0.01
SCARB2-213ENST00000638680 NTN3O00634 580 aaPredicted RBP15.11■□□□□ 0.01
SCARB2-213ENST00000638680 KLRD1Q13241 179 aa15.11■□□□□ 0.01
SCARB2-213ENST00000638680 IGHV3-73A0A0B4J1V6 119 aa15.1■□□□□ 0.01
SCARB2-213ENST00000638680 GAGE12BA1L429 117 aa15.1■□□□□ 0.01
SCARB2-213ENST00000638680 ADARB2-AS1A8MUL3 147 aa15.1■□□□□ 0.01
SCARB2-213ENST00000638680 MLANAQ16655 118 aa15.1■□□□□ 0.01
SCARB2-213ENST00000638680 LINC00479Q96M42 142 aa15.1■□□□□ 0.01
SCARB2-213ENST00000638680 MPDZO75970 2070 aa15.1■□□□□ 0.01
SCARB2-213ENST00000638680 E9PLN8 166 aa15.1■□□□□ 0.01
SCARB2-213ENST00000638680 LINC00158P58513 81 aa15.1■□□□□ 0.01
SCARB2-213ENST00000638680 Q0VFX4 171 aa15.1■□□□□ 0.01
SCARB2-213ENST00000638680 TOMM40O96008 361 aa15.09■□□□□ 0.01
SCARB2-213ENST00000638680 VMO1Q7Z5L0 202 aa15.09■□□□□ 0.01
SCARB2-213ENST00000638680 AMN1Q8IY45 258 aa15.09■□□□□ 0.01
SCARB2-213ENST00000638680 TRGV4A0A0C4DH28 118 aa15.09■□□□□ 0.01
SCARB2-213ENST00000638680 MORN3Q6PF18 240 aaPredicted RBP15.09■□□□□ 0.01
SCARB2-213ENST00000638680 DLX4Q92988 240 aaPredicted RBP15.09■□□□□ 0.01
SCARB2-213ENST00000638680 GAFA1Q96PS6 74 aa15.09■□□□□ 0.01
SCARB2-213ENST00000638680 COX11Q9Y6N1 276 aa15.09■□□□□ 0.01
SCARB2-213ENST00000638680 CD5LO43866 347 aa15.09■□□□□ 0.01
SCARB2-213ENST00000638680 PRSS22Q9GZN4 317 aa15.09■□□□□ 0.01
SCARB2-213ENST00000638680 TMEM178BH3BS89 294 aa15.09■□□□□ 0.01
SCARB2-213ENST00000638680 WNT2P09544 360 aa15.09■□□□□ 0.01
SCARB2-213ENST00000638680 BRWD3Q6RI45 1802 aa15.08■□□□□ 0.01
SCARB2-213ENST00000638680 ZNF876PQ49A33 203 aa15.08■□□□□ 0.01
SCARB2-213ENST00000638680 CASP8AP2Q9UKL3 1982 aa15.08■□□□□ 0.01
SCARB2-213ENST00000638680 NDPQ00604 133 aa15.08■□□□□ 0
SCARB2-213ENST00000638680 TMEM105Q8N8V8 129 aa15.08■□□□□ 0
SCARB2-213ENST00000638680 Q0VG73 95 aa15.08■□□□□ 0
SCARB2-213ENST00000638680 ZC2HC1BQ5TFG8 222 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms