RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 CASC10Q5T4H9 136 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 CTRB2Q6GPI1 263 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 SPSB3Q6PJ21 355 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 MMD2Q8IY49 270 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 USMG5Q96IX5 58 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 SCRT1Q9BWW7 348 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 HINT2Q9BX68 163 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 NPCDR1Q9BY65 106 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 WFDC10AQ9H1F0 79 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 TMEM231Q9H6L2 316 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 RPRMQ9NS64 109 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 RFNGQ9Y644 331 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 PCLOQ9Y6V0 5065 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 IGLV11-55A0A075B6I3 123 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 A0A0G2JLM5 398 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 SMCO3A2RU48 225 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 RBFOX3A6NFN3 312 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 NPIPB5A8MRT5 1133 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 F8W735 103 aaPredicted RBP5.9□□□□□ -1.46
PNKP-229ENST00000637897 CYB5BO43169 146 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 OR2C1O95371 312 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 IFNA1P01562 189 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 REG1AP05451 166 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 CD7P09564 240 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 TAGLN2P37802 199 aaKnown RBP5.9□□□□□ -1.46
PNKP-229ENST00000637897 OPRK1P41145 380 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 SUB1P53999 127 aaKnown RBP eCLIP5.9□□□□□ -1.46
PNKP-229ENST00000637897 ELLP55199 621 aaPredicted RBP5.9□□□□□ -1.46
PNKP-229ENST00000637897 PMS2P11Q13670 270 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 HAGHQ16775 308 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 C15orf32Q32M92 178 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 BSXQ3C1V8 233 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 CD300EQ496F6 205 aaPredicted RBP5.9□□□□□ -1.46
PNKP-229ENST00000637897 KHDC3LQ587J8 217 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 FFAR4Q5NUL3 377 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 CACNG8Q8WXS5 425 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 NKX6-2Q9C056 277 aaPredicted RBP5.9□□□□□ -1.46
PNKP-229ENST00000637897 ACTR3CQ9C0K3 210 aaPredicted RBP5.9□□□□□ -1.46
PNKP-229ENST00000637897 SLC35B3Q9H1N7 401 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 NPVFQ9HCQ7 196 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 NDUFA4L2Q9NRX3 87 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 SLC39A9Q9NUM3 307 aa5.9□□□□□ -1.46
PNKP-229ENST00000637897 CTXND1A0A1B0GTU2 59 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 TMEM213A2RRL7 107 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 MAP1LC3B2A6NCE7 125 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 RBMY1BA6NDE4 496 aaKnown RBP5.89□□□□□ -1.47
PNKP-229ENST00000637897 RBMY1EA6NEQ0 496 aaKnown RBP5.89□□□□□ -1.47
PNKP-229ENST00000637897 C2orf70A6NJV1 201 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 FAM223BA6NKX1 122 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 SCO1O75880 301 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 ACTL6BO94805 426 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 RBMY1DP0C7P1 496 aaKnown RBP5.89□□□□□ -1.47
PNKP-229ENST00000637897 ADCYAP1P18509 176 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 RPL27AP46776 148 aaKnown RBP5.89□□□□□ -1.47
PNKP-229ENST00000637897 PPT1P50897 306 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 CCL20P78556 96 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 ATP5G2Q06055 141 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 DEFB114Q30KQ6 69 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 ZNF506Q5JVG8 444 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 TEPPQ6URK8 271 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 UNQ9165/PRO28630Q6UXU0 137 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 FAM223AQ8IWN6 122 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 NECAP1Q8NC96 275 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 OR10W1Q8NGF6 305 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 OR10G4Q8NGN3 311 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 OR10G9Q8NGN4 311 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 OR10G7Q8NGN6 311 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 MUC7Q8TAX7 377 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 SUN5Q8TC36 379 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 TMEM170AQ8WVE7 144 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 MAP1LC3BQ9GZQ8 125 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 RETNQ9HD89 108 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 FBXL7Q9UJT9 491 aa5.89□□□□□ -1.47
PNKP-229ENST00000637897 ALMS1Q8TCU4 4167 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 A0A1B0GV50 99 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 C9JQL5 133 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 C3orf84H3BNL1 204 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 NDUFS6O75380 124 aaKnown RBP5.88□□□□□ -1.47
PNKP-229ENST00000637897 RNASE2P10153 161 aaKnown RBP5.88□□□□□ -1.47
PNKP-229ENST00000637897 GPX4P36969 197 aaPredicted RBP5.88□□□□□ -1.47
PNKP-229ENST00000637897 WT1-ASQ06250 92 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 BTN1A1Q13410 526 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 ZNF726P1Q15940 193 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 GUCA2BQ16661 112 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 RPEL1Q2QD12 228 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 SOHLH1Q5JUK2 328 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 LCN15Q6UWW0 184 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 CLEC19AQ6UXS0 136 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 TMEM144Q7Z5S9 345 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 RPP25LQ8N5L8 163 aaKnown RBP5.88□□□□□ -1.47
PNKP-229ENST00000637897 ZNF502Q8TBZ5 544 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 RNASEH2CQ8TDP1 164 aaKnown RBP5.88□□□□□ -1.47
PNKP-229ENST00000637897 SRSF8Q9BRL6 282 aaKnown RBP5.88□□□□□ -1.47
PNKP-229ENST00000637897 ELOVL1Q9BW60 279 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 GGTLC1Q9BX51 225 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 VSIRQ9H7M9 311 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 GNG13Q9P2W3 67 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 MLXQ9UH92 298 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 VAX2Q9UIW0 290 aa5.88□□□□□ -1.47
PNKP-229ENST00000637897 LOC102723971A0A1B0GUV8 181 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms