RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 PUS1Q9Y606 427 aaKnown RBP eCLIP9.09□□□□□ -0.95
CLN6-223ENST00000637823 RBFOX3A6NFN3 312 aa9.08□□□□□ -0.96
CLN6-223ENST00000637823 BMPR1BO00238 502 aa9.08□□□□□ -0.96
CLN6-223ENST00000637823 GGCTO75223 188 aaKnown RBP9.08□□□□□ -0.96
CLN6-223ENST00000637823 EIF3GO75821 320 aaKnown RBP eCLIP9.08□□□□□ -0.96
CLN6-223ENST00000637823 IFNA1P01562 189 aa9.08□□□□□ -0.96
CLN6-223ENST00000637823 ARL14EPLP0DKL9 152 aa9.08□□□□□ -0.96
CLN6-223ENST00000637823 TAGLN2P37802 199 aaKnown RBP9.08□□□□□ -0.96
CLN6-223ENST00000637823 GUK1Q16774 197 aa9.08□□□□□ -0.96
CLN6-223ENST00000637823 STXBP6Q8NFX7 210 aa9.08□□□□□ -0.96
CLN6-223ENST00000637823 OR4F5Q8NH21 305 aa9.08□□□□□ -0.96
CLN6-223ENST00000637823 WIPF2Q8TF74 440 aaPredicted RBP9.08□□□□□ -0.96
CLN6-223ENST00000637823 WFDC12Q8WWY7 111 aa9.08□□□□□ -0.96
CLN6-223ENST00000637823 ZNF414Q96IQ9 312 aa9.08□□□□□ -0.96
CLN6-223ENST00000637823 FAM167A-AS1Q96KT0 104 aa9.08□□□□□ -0.96
CLN6-223ENST00000637823 UHRF2Q96PU4 802 aa9.08□□□□□ -0.96
CLN6-223ENST00000637823 SCRT1Q9BWW7 348 aa9.08□□□□□ -0.96
CLN6-223ENST00000637823 SLC25A39Q9BZJ4 359 aaPredicted RBP9.08□□□□□ -0.96
CLN6-223ENST00000637823 RNF24Q9Y225 148 aa9.08□□□□□ -0.96
CLN6-223ENST00000637823 TRAV5A0A0B4J249 113 aa9.07□□□□□ -0.96
CLN6-223ENST00000637823 NDUFA4O00483 81 aa9.07□□□□□ -0.96
CLN6-223ENST00000637823 TRBV12-3P01733 135 aa9.07□□□□□ -0.96
CLN6-223ENST00000637823 CD5P06127 495 aa9.07□□□□□ -0.96
CLN6-223ENST00000637823 LGALS1P09382 135 aaKnown RBP9.07□□□□□ -0.96
CLN6-223ENST00000637823 GCHFRP30047 84 aa9.07□□□□□ -0.96
CLN6-223ENST00000637823 CDX1P47902 265 aaPredicted RBP9.07□□□□□ -0.96
CLN6-223ENST00000637823 PEA15Q15121 130 aa9.07□□□□□ -0.96
CLN6-223ENST00000637823 SHANK2-AS3Q9BTD1 123 aa9.07□□□□□ -0.96
CLN6-223ENST00000637823 SLC25A2Q9BXI2 301 aa9.07□□□□□ -0.96
CLN6-223ENST00000637823 EIF5A2Q9GZV4 153 aaKnown RBP9.07□□□□□ -0.96
CLN6-223ENST00000637823 TMPRSS5Q9H3S3 457 aa9.07□□□□□ -0.96
CLN6-223ENST00000637823 SMDT1Q9H4I9 107 aa9.07□□□□□ -0.96
CLN6-223ENST00000637823 ZFAND3Q9H8U3 227 aa9.07□□□□□ -0.96
CLN6-223ENST00000637823 MANBALQ9NQG1 85 aa9.07□□□□□ -0.96
CLN6-223ENST00000637823 TMEM167BQ9NRX6 74 aa9.07□□□□□ -0.96
CLN6-223ENST00000637823 GNG13Q9P2W3 67 aa9.07□□□□□ -0.96
CLN6-223ENST00000637823 RABAC1Q9UI14 185 aa9.07□□□□□ -0.96
CLN6-223ENST00000637823 IGHV3-35A0A0C4DH35 117 aa9.06□□□□□ -0.96
CLN6-223ENST00000637823 H3BRN7 92 aa9.06□□□□□ -0.96
CLN6-223ENST00000637823 OR7C2O60412 319 aa9.06□□□□□ -0.96
CLN6-223ENST00000637823 ATP6V1G1O75348 118 aa9.06□□□□□ -0.96
CLN6-223ENST00000637823 USF2Q15853 346 aaPredicted RBP9.06□□□□□ -0.96
CLN6-223ENST00000637823 HAGHQ16775 308 aa9.06□□□□□ -0.96
CLN6-223ENST00000637823 ZNF506Q5JVG8 444 aa9.06□□□□□ -0.96
CLN6-223ENST00000637823 MORN5Q5VZ52 161 aa9.06□□□□□ -0.96
CLN6-223ENST00000637823 IQCF2Q8IXL9 164 aa9.06□□□□□ -0.96
CLN6-223ENST00000637823 SUN5Q8TC36 379 aa9.06□□□□□ -0.96
CLN6-223ENST00000637823 PAXXQ9BUH6 204 aa9.06□□□□□ -0.96
CLN6-223ENST00000637823 OR51M1Q9H341 326 aa9.06□□□□□ -0.96
CLN6-223ENST00000637823 LOC102723971A0A1B0GUV8 181 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 CLPSL1A2RUU4 121 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 ZNF98A6NK75 572 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 I3L521 148 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 HSPB1P04792 205 aaKnown RBP9.05□□□□□ -0.96
CLN6-223ENST00000637823 BCL2P10415 239 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 S100A1P23297 94 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 NPPCP23582 126 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 SRSF3P84103 164 aaKnown RBP9.05□□□□□ -0.96
CLN6-223ENST00000637823 FAM106AQ4KMX7 169 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 TCTEX1D4Q5JR98 221 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 TOR2AQ5JU69 321 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 GPHB5Q86YW7 130 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 ZNF503Q96F45 646 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 OR5B12Q96R08 314 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 RARRES2Q99969 163 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 TREM1Q9NP99 234 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 TMEM14CQ9P0S9 112 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 VAX2Q9UIW0 290 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 RNF114Q9Y508 228 aa9.05□□□□□ -0.96
CLN6-223ENST00000637823 PAGE4O60829 102 aa9.04□□□□□ -0.96
CLN6-223ENST00000637823 NDUFS6O75380 124 aaKnown RBP9.04□□□□□ -0.96
CLN6-223ENST00000637823 CRYBB3P26998 211 aa9.04□□□□□ -0.96
CLN6-223ENST00000637823 ICAM4Q14773 271 aa9.04□□□□□ -0.96
CLN6-223ENST00000637823 C4orf3Q8WVX3 66 aa9.04□□□□□ -0.96
CLN6-223ENST00000637823 METTL26Q96S19 204 aa9.04□□□□□ -0.96
CLN6-223ENST00000637823 TXNDC17Q9BRA2 123 aa9.04□□□□□ -0.96
CLN6-223ENST00000637823 ARL2-SNX15V9GYD0 113 aa9.04□□□□□ -0.96
CLN6-223ENST00000637823 NIPBLQ6KC79 2804 aaeCLIP9.03□□□□□ -0.96
CLN6-223ENST00000637823 IGHV3OR16-8A0A075B7F1 116 aa9.03□□□□□ -0.96
CLN6-223ENST00000637823 A0A1B0GUS0 222 aa9.03□□□□□ -0.96
CLN6-223ENST00000637823 K7EMT4 169 aa9.03□□□□□ -0.96
CLN6-223ENST00000637823 OR10J4P0C629 311 aa9.03□□□□□ -0.96
CLN6-223ENST00000637823 GP9P14770 177 aa9.03□□□□□ -0.96
CLN6-223ENST00000637823 PROK1P58294 105 aa9.03□□□□□ -0.96
CLN6-223ENST00000637823 RPEL1Q2QD12 228 aa9.03□□□□□ -0.96
CLN6-223ENST00000637823 C1orf194Q5T5A4 169 aa9.03□□□□□ -0.96
CLN6-223ENST00000637823 LEMD1Q68G75 181 aa9.03□□□□□ -0.96
CLN6-223ENST00000637823 BPIFA4PQ86YQ2 179 aa9.03□□□□□ -0.96
CLN6-223ENST00000637823 RXFP4Q8TDU9 374 aa9.03□□□□□ -0.96
CLN6-223ENST00000637823 FXYD5Q96DB9 178 aa9.03□□□□□ -0.96
CLN6-223ENST00000637823 C20orf24Q9BUV8 137 aa9.03□□□□□ -0.96
CLN6-223ENST00000637823 TMEM231Q9H6L2 316 aa9.03□□□□□ -0.96
CLN6-223ENST00000637823 U3KQE9 123 aa9.03□□□□□ -0.96
CLN6-223ENST00000637823 A0A1W2PRE2 83 aa9.02□□□□□ -0.97
CLN6-223ENST00000637823 TMEM218A2RU14 115 aa9.02□□□□□ -0.97
CLN6-223ENST00000637823 KRBOX1C9JBD0 128 aa9.02□□□□□ -0.97
CLN6-223ENST00000637823 HAX1O00165 279 aa9.02□□□□□ -0.97
CLN6-223ENST00000637823 NBEAP1P0C6P0 100 aa9.02□□□□□ -0.97
CLN6-223ENST00000637823 PYYP10082 97 aa9.02□□□□□ -0.97
CLN6-223ENST00000637823 HIST1H1EP10412 219 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms