RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 VSIRQ9H7M9 311 aa12.95□□□□□ -0.34
CLN6-218ENST00000637223 RABAC1Q9UI14 185 aa12.95□□□□□ -0.34
CLN6-218ENST00000637223 LSM4Q9Y4Z0 139 aaKnown RBP12.95□□□□□ -0.34
CLN6-218ENST00000637223 RYR3Q15413 4870 aa12.95□□□□□ -0.34
CLN6-218ENST00000637223 ZNF785A8K8V0 405 aa12.94□□□□□ -0.34
CLN6-218ENST00000637223 BMI1P35226 326 aa12.94□□□□□ -0.34
CLN6-218ENST00000637223 NARS2Q96I59 477 aaKnown RBP12.94□□□□□ -0.34
CLN6-218ENST00000637223 WDR83OSQ9Y284 106 aa12.94□□□□□ -0.34
CLN6-218ENST00000637223 IGKV3-7A0A075B6H7 116 aa12.93□□□□□ -0.34
CLN6-218ENST00000637223 KANTRA0A1W2PQU2 76 aa12.93□□□□□ -0.34
CLN6-218ENST00000637223 K7EIL1 84 aa12.93□□□□□ -0.34
CLN6-218ENST00000637223 AGPAT2O15120 278 aa12.93□□□□□ -0.34
CLN6-218ENST00000637223 CFDP00746 253 aaPredicted RBP12.93□□□□□ -0.34
CLN6-218ENST00000637223 ORM2P19652 201 aa12.93□□□□□ -0.34
CLN6-218ENST00000637223 OPCMLQ14982 345 aa12.93□□□□□ -0.34
CLN6-218ENST00000637223 SLC51BQ86UW2 128 aa12.93□□□□□ -0.34
CLN6-218ENST00000637223 SMIM3Q9BZL3 60 aa12.93□□□□□ -0.34
CLN6-218ENST00000637223 ARL6Q9H0F7 186 aa12.93□□□□□ -0.34
CLN6-218ENST00000637223 TMEM231Q9H6L2 316 aa12.93□□□□□ -0.34
CLN6-218ENST00000637223 DOK5Q9P104 306 aa12.93□□□□□ -0.34
CLN6-218ENST00000637223 U3KQE9 123 aa12.93□□□□□ -0.34
CLN6-218ENST00000637223 TRAV25A0A0B4J276 109 aa12.92□□□□□ -0.34
CLN6-218ENST00000637223 A0A1W2PS18 150 aa12.92□□□□□ -0.34
CLN6-218ENST00000637223 RGS13O14921 159 aa12.92□□□□□ -0.34
CLN6-218ENST00000637223 BCL2L11O43521 198 aa12.92□□□□□ -0.34
CLN6-218ENST00000637223 DFFBO76075 338 aa12.92□□□□□ -0.34
CLN6-218ENST00000637223 LINC00869P0C866 280 aa12.92□□□□□ -0.34
CLN6-218ENST00000637223 FGF7P21781 194 aa12.92□□□□□ -0.34
CLN6-218ENST00000637223 CAMLGP49069 296 aa12.92□□□□□ -0.34
CLN6-218ENST00000637223 SELENOTP62341 195 aa12.92□□□□□ -0.34
CLN6-218ENST00000637223 EIF5AP63241 154 aaKnown RBP12.92□□□□□ -0.34
CLN6-218ENST00000637223 TCF24Q7RTU0 167 aa12.92□□□□□ -0.34
CLN6-218ENST00000637223 OR1B1Q8NGR6 318 aa12.92□□□□□ -0.34
CLN6-218ENST00000637223 ARPC5LQ9BPX5 153 aa12.92□□□□□ -0.34
CLN6-218ENST00000637223 SLC45A2Q9UMX9 530 aa12.92□□□□□ -0.34
CLN6-218ENST00000637223 TSPAN4O14817 238 aa12.91□□□□□ -0.34
CLN6-218ENST00000637223 RAB31Q13636 194 aa12.91□□□□□ -0.34
CLN6-218ENST00000637223 STPG3Q8N7X2 389 aa12.91□□□□□ -0.34
CLN6-218ENST00000637223 MRAPQ8TCY5 172 aa12.91□□□□□ -0.34
CLN6-218ENST00000637223 GRAMD2BQ96HH9 432 aa12.91□□□□□ -0.34
CLN6-218ENST00000637223 ATP5SQ99766 215 aa12.91□□□□□ -0.34
CLN6-218ENST00000637223 GGTLC1Q9BX51 225 aa12.91□□□□□ -0.34
CLN6-218ENST00000637223 TFPI2P48307 235 aa12.9□□□□□ -0.34
CLN6-218ENST00000637223 RPL11P62913 178 aaKnown RBP12.9□□□□□ -0.34
CLN6-218ENST00000637223 FAM90A2PQ658T7 463 aa12.9□□□□□ -0.34
CLN6-218ENST00000637223 C16orf54Q6UWD8 224 aa12.9□□□□□ -0.34
CLN6-218ENST00000637223 ZNF767PQ75MW2 155 aa12.9□□□□□ -0.34
CLN6-218ENST00000637223 GTSCR1Q86UQ5 136 aa12.9□□□□□ -0.34
CLN6-218ENST00000637223 GBGT1Q8N5D6 347 aa12.9□□□□□ -0.34
CLN6-218ENST00000637223 SPAG8Q99932 426 aaPredicted RBP12.9□□□□□ -0.34
CLN6-218ENST00000637223 BOLA1Q9Y3E2 137 aa12.9□□□□□ -0.34
CLN6-218ENST00000637223 BUB3O43684 328 aa12.89□□□□□ -0.35
CLN6-218ENST00000637223 CD7P09564 240 aa12.89□□□□□ -0.35
CLN6-218ENST00000637223 AP2S1P53680 142 aaPredicted RBP12.89□□□□□ -0.35
CLN6-218ENST00000637223 CD81P60033 236 aa12.89□□□□□ -0.35
CLN6-218ENST00000637223 DEFB121Q5J5C9 76 aa12.89□□□□□ -0.35
CLN6-218ENST00000637223 MIC13Q5XKP0 118 aa12.89□□□□□ -0.35
CLN6-218ENST00000637223 STOML3Q8TAV4 291 aa12.89□□□□□ -0.35
CLN6-218ENST00000637223 GLMPQ8WWB7 406 aa12.89□□□□□ -0.35
CLN6-218ENST00000637223 PHYHIPLQ96FC7 376 aa12.89□□□□□ -0.35
CLN6-218ENST00000637223 WFDC1Q9HC57 220 aa12.89□□□□□ -0.35
CLN6-218ENST00000637223 PFDN2Q9UHV9 154 aa12.89□□□□□ -0.35
CLN6-218ENST00000637223 HYPMO75409 117 aa12.88□□□□□ -0.35
CLN6-218ENST00000637223 JTBO76095 146 aa12.88□□□□□ -0.35
CLN6-218ENST00000637223 IFNA7P01567 189 aa12.88□□□□□ -0.35
CLN6-218ENST00000637223 OR5G3P0C626 314 aa12.88□□□□□ -0.35
CLN6-218ENST00000637223 PLP1P60201 277 aa12.88□□□□□ -0.35
CLN6-218ENST00000637223 WFDC3Q8IUB2 231 aa12.88□□□□□ -0.35
CLN6-218ENST00000637223 Q8N1Y9 231 aa12.88□□□□□ -0.35
CLN6-218ENST00000637223 NPCDR1Q9BY65 106 aa12.88□□□□□ -0.35
CLN6-218ENST00000637223 WDR61Q9GZS3 305 aaKnown RBP12.88□□□□□ -0.35
CLN6-218ENST00000637223 FBXL17Q9UF56 701 aa12.88□□□□□ -0.35
CLN6-218ENST00000637223 HIGD1AQ9Y241 93 aa12.88□□□□□ -0.35
CLN6-218ENST00000637223 MPDU1O75352 247 aa12.87□□□□□ -0.35
CLN6-218ENST00000637223 CD5P06127 495 aa12.87□□□□□ -0.35
CLN6-218ENST00000637223 PRR20EP86478 221 aa12.87□□□□□ -0.35
CLN6-218ENST00000637223 PRR20CP86479 221 aa12.87□□□□□ -0.35
CLN6-218ENST00000637223 PRR20DP86480 221 aa12.87□□□□□ -0.35
CLN6-218ENST00000637223 PRR20BP86481 221 aa12.87□□□□□ -0.35
CLN6-218ENST00000637223 PRR20AP86496 221 aa12.87□□□□□ -0.35
CLN6-218ENST00000637223 IFITM2Q01629 132 aa12.87□□□□□ -0.35
CLN6-218ENST00000637223 TEX261Q6UWH6 196 aa12.87□□□□□ -0.35
CLN6-218ENST00000637223 STXBP6Q8NFX7 210 aa12.87□□□□□ -0.35
CLN6-218ENST00000637223 SCRT1Q9BWW7 348 aa12.87□□□□□ -0.35
CLN6-218ENST00000637223 MS4A6AQ9H2W1 248 aa12.87□□□□□ -0.35
CLN6-218ENST00000637223 SLC25A22Q9H936 323 aa12.87□□□□□ -0.35
CLN6-218ENST00000637223 PXMP4Q9Y6I8 212 aa12.87□□□□□ -0.35
CLN6-218ENST00000637223 HELTA6NFD8 242 aa12.86□□□□□ -0.35
CLN6-218ENST00000637223 OR4C46A6NHA9 309 aa12.86□□□□□ -0.35
CLN6-218ENST00000637223 DNASE2O00115 360 aaPredicted RBP12.86□□□□□ -0.35
CLN6-218ENST00000637223 COX7A2P2O60397 106 aa12.86□□□□□ -0.35
CLN6-218ENST00000637223 IFNA5P01569 189 aa12.86□□□□□ -0.35
CLN6-218ENST00000637223 RPL29P47914 159 aaKnown RBP12.86□□□□□ -0.35
CLN6-218ENST00000637223 B2MP61769 119 aa12.86□□□□□ -0.35
CLN6-218ENST00000637223 PAFAH1B2P68402 229 aa12.86□□□□□ -0.35
CLN6-218ENST00000637223 ZNF266Q14584 549 aa12.86□□□□□ -0.35
CLN6-218ENST00000637223 LEMD1Q68G75 181 aa12.86□□□□□ -0.35
CLN6-218ENST00000637223 PATE2Q6UY27 113 aa12.86□□□□□ -0.35
CLN6-218ENST00000637223 SIGLEC15Q6ZMC9 328 aa12.86□□□□□ -0.35
CLN6-218ENST00000637223 UHRF2Q96PU4 802 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms