RNA–Protein interactions for RNA: ENST00000637044.1

GABRA1-216, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 4,108 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-216ENST00000637044 WT1-ASQ06250 92 aa6.73□□□□□ -1.33
GABRA1-216ENST00000637044 TM4SF20Q53R12 229 aa6.73□□□□□ -1.33
GABRA1-216ENST00000637044 OR4X2Q8NGF9 303 aa6.73□□□□□ -1.33
GABRA1-216ENST00000637044 NAGKQ9UJ70 344 aa6.73□□□□□ -1.33
GABRA1-216ENST00000637044 TNCP24821 2201 aa6.73□□□□□ -1.33
GABRA1-216ENST00000637044 TRAV9-1A0A075B6T8 112 aa6.73□□□□□ -1.33
GABRA1-216ENST00000637044 OVOL3O00110 214 aa6.73□□□□□ -1.33
GABRA1-216ENST00000637044 IGLV1-47P01700 117 aa6.73□□□□□ -1.33
GABRA1-216ENST00000637044 CNTFRP26992 372 aa6.73□□□□□ -1.33
GABRA1-216ENST00000637044 LOXL1Q08397 574 aaPredicted RBP6.73□□□□□ -1.33
GABRA1-216ENST00000637044 EBLN2Q6P2I7 272 aa6.73□□□□□ -1.33
GABRA1-216ENST00000637044 WFDC3Q8IUB2 231 aa6.73□□□□□ -1.33
GABRA1-216ENST00000637044 SRD5A3Q9H8P0 318 aa6.73□□□□□ -1.33
GABRA1-216ENST00000637044 TRGC2P03986 189 aa6.73□□□□□ -1.33
GABRA1-216ENST00000637044 EPDR1Q9UM22 224 aa6.73□□□□□ -1.33
GABRA1-216ENST00000637044 MYO9AB2RTY4 2548 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 TRBV7-1A0A0A6YYK4 115 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 TRBV9A0A0B4J1U6 114 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 FABP4P15090 132 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 MLANAQ16655 118 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 KLF17Q5JT82 389 aaPredicted RBP6.72□□□□□ -1.33
GABRA1-216ENST00000637044 SPATA31B1PQ5VZV4 182 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 FAM110DQ8TAY7 271 aaPredicted RBP6.72□□□□□ -1.33
GABRA1-216ENST00000637044 USMG5Q96IX5 58 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 FOXC2Q99958 501 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 TGIF2-C20orf24A0A0A6YYL0 155 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 LMO4P61968 165 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 SMUG1Q53HV7 270 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 RBPMS2Q6ZRY4 209 aaKnown RBP6.72□□□□□ -1.33
GABRA1-216ENST00000637044 NHLRC2Q8NBF2 726 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 OR10D4PQ8NGN7 298 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 C5orf30Q96GV9 206 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 SLC25A39Q9BZJ4 359 aaPredicted RBP6.72□□□□□ -1.33
GABRA1-216ENST00000637044 TMEM242Q9NWH2 141 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 IL36BQ9NZH7 164 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 IGHV3OR16-13A0A075B7E8 117 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 IGHV3-74A0A0B4J1X5 117 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 TOMM40O96008 361 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 IGHV3-11P01762 117 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 APCSP02743 223 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 PAX8Q06710 450 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 VWC2Q2TAL6 325 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 VN1R17PQ8TDU5 208 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 C12orf57Q99622 126 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 TPSG1Q9NRR2 321 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 CDC42EP3Q9UKI2 254 aa6.72□□□□□ -1.33
GABRA1-216ENST00000637044 ACANP16112 2415 aa6.71□□□□□ -1.33
GABRA1-216ENST00000637044 TRAV34A0A0B4J273 112 aa6.71□□□□□ -1.33
GABRA1-216ENST00000637044 ODF3L1Q8IXM7 274 aa6.71□□□□□ -1.33
GABRA1-216ENST00000637044 PRSS3P2Q8NHM4 247 aa6.71□□□□□ -1.33
GABRA1-216ENST00000637044 SGK494Q96LW2 274 aa6.71□□□□□ -1.33
GABRA1-216ENST00000637044 TMSB15BA0A087X1C1 80 aa6.71□□□□□ -1.34
GABRA1-216ENST00000637044 FAM223BA6NKX1 122 aa6.71□□□□□ -1.34
GABRA1-216ENST00000637044 NPIPB5A8MRT5 1133 aa6.71□□□□□ -1.34
GABRA1-216ENST00000637044 C9JCJ5 164 aa6.71□□□□□ -1.34
GABRA1-216ENST00000637044 HOXB4P17483 251 aaPredicted RBP6.71□□□□□ -1.34
GABRA1-216ENST00000637044 AARDQ4LEZ3 155 aa6.71□□□□□ -1.34
GABRA1-216ENST00000637044 FAM223AQ8IWN6 122 aa6.71□□□□□ -1.34
GABRA1-216ENST00000637044 OSTCQ9NRP0 149 aa6.71□□□□□ -1.34
GABRA1-216ENST00000637044 CFAP46Q8IYW2 2715 aa6.71□□□□□ -1.34
GABRA1-216ENST00000637044 TRAV5A0A0B4J249 113 aa6.71□□□□□ -1.34
GABRA1-216ENST00000637044 ZNF207O43670 478 aaKnown RBP6.71□□□□□ -1.34
GABRA1-216ENST00000637044 PMCHP20382 165 aa6.71□□□□□ -1.34
GABRA1-216ENST00000637044 ZFP36P26651 326 aaKnown RBP6.71□□□□□ -1.34
GABRA1-216ENST00000637044 AMTP48728 403 aa6.71□□□□□ -1.34
GABRA1-216ENST00000637044 YPEL3P61236 119 aaPredicted RBP6.71□□□□□ -1.34
GABRA1-216ENST00000637044 SNRPD3P62318 126 aaKnown RBP6.71□□□□□ -1.34
GABRA1-216ENST00000637044 PMS2P11Q13670 270 aa6.71□□□□□ -1.34
GABRA1-216ENST00000637044 LEMD1Q68G75 181 aa6.71□□□□□ -1.34
GABRA1-216ENST00000637044 ZNF343Q6P1L6 599 aa6.71□□□□□ -1.34
GABRA1-216ENST00000637044 RNASEKQ6P5S7 137 aaKnown RBP6.71□□□□□ -1.34
GABRA1-216ENST00000637044 TMEM208Q9BTX3 173 aa6.71□□□□□ -1.34
GABRA1-216ENST00000637044 ANKRD17O75179 2603 aaKnown RBP6.71□□□□□ -1.34
GABRA1-216ENST00000637044 IGHV3-49A0A0A0MS15 119 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 ZNF98A6NK75 572 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 TCF23Q7RTU1 214 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 CIARTQ8N365 385 aaPredicted RBP6.7□□□□□ -1.34
GABRA1-216ENST00000637044 TMEM116Q8NCL8 245 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 LINC00527Q9UJ94 153 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 ZFP30Q9Y2G7 519 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 LY96Q9Y6Y9 160 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 MDKP21741 143 aaPredicted RBP6.7□□□□□ -1.34
GABRA1-216ENST00000637044 TFPI2P48307 235 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 IQCJQ1A5X6 159 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 UFC1Q9Y3C8 167 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 MTORP42345 2549 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 IGHV3OR16-8A0A075B7F1 116 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 IGLC7A0M8Q6 106 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 ATP6V0E1O15342 81 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 PROP1O75360 226 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 P0C879 139 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 PAX6P26367 422 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 CD81P60033 236 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 LYPD1Q8N2G4 141 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 OR4B1Q8NGF8 309 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 LYPD6BQ8NI32 183 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 FREM2Q5SZK8 3169 aa6.7□□□□□ -1.34
GABRA1-216ENST00000637044 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.69□□□□□ -1.34
GABRA1-216ENST00000637044 INS-IGF2F8WCM5 200 aa6.69□□□□□ -1.34
GABRA1-216ENST00000637044 GGCTO75223 188 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms