RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 PRR31Q5SQ13 230 aa14.54□□□□□ -0.08
CACNA1A-225ENST00000636389 SPRED2Q7Z698 418 aa14.54□□□□□ -0.08
CACNA1A-225ENST00000636389 OR9G9P0C7N8 305 aa14.54□□□□□ -0.08
CACNA1A-225ENST00000636389 MUC4Q99102 2169 aa14.54□□□□□ -0.08
CACNA1A-225ENST00000636389 PFN2P35080 140 aa14.54□□□□□ -0.08
CACNA1A-225ENST00000636389 IRF3Q14653 427 aa14.54□□□□□ -0.08
CACNA1A-225ENST00000636389 C9orf106Q8NAJ2 232 aa14.54□□□□□ -0.08
CACNA1A-225ENST00000636389 SLC25A39Q9BZJ4 359 aaPredicted RBP14.54□□□□□ -0.08
CACNA1A-225ENST00000636389 MPTX1A8MV57 137 aa14.54□□□□□ -0.08
CACNA1A-225ENST00000636389 ZNF708P17019 499 aa14.54□□□□□ -0.08
CACNA1A-225ENST00000636389 TIMM21Q9BVV7 248 aa14.54□□□□□ -0.08
CACNA1A-225ENST00000636389 FAM90A2PQ658T7 463 aa14.53□□□□□ -0.08
CACNA1A-225ENST00000636389 TEX38Q6PEX7 206 aa14.53□□□□□ -0.08
CACNA1A-225ENST00000636389 BHLHA9Q7RTU4 235 aa14.53□□□□□ -0.08
CACNA1A-225ENST00000636389 MBNL3Q9NUK0 354 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-225ENST00000636389 UPK2O00526 184 aa14.53□□□□□ -0.08
CACNA1A-225ENST00000636389 ZNF329Q86UD4 541 aa14.53□□□□□ -0.08
CACNA1A-225ENST00000636389 CHCHD1Q96BP2 118 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-225ENST00000636389 TRBV7-1A0A0A6YYK4 115 aa14.53□□□□□ -0.08
CACNA1A-225ENST00000636389 MYMXA0A1B0GTQ4 84 aa14.53□□□□□ -0.08
CACNA1A-225ENST00000636389 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.52□□□□□ -0.08
CACNA1A-225ENST00000636389 UBE2BP63146 152 aa14.52□□□□□ -0.08
CACNA1A-225ENST00000636389 MESP2Q0VG99 397 aa14.52□□□□□ -0.08
CACNA1A-225ENST00000636389 MORN2Q502X0 79 aa14.52□□□□□ -0.08
CACNA1A-225ENST00000636389 RASL11AQ6T310 242 aa14.52□□□□□ -0.08
CACNA1A-225ENST00000636389 TMEM144Q7Z5S9 345 aa14.52□□□□□ -0.08
CACNA1A-225ENST00000636389 RNF166Q96A37 237 aaPredicted RBP14.52□□□□□ -0.08
CACNA1A-225ENST00000636389 DUTP33316 252 aaKnown RBP14.52□□□□□ -0.08
CACNA1A-225ENST00000636389 H3BUX3 64 aa14.52□□□□□ -0.09
CACNA1A-225ENST00000636389 PILRAQ9UKJ1 303 aa14.52□□□□□ -0.09
CACNA1A-225ENST00000636389 PRSS23O95084 383 aa14.52□□□□□ -0.09
CACNA1A-225ENST00000636389 PRB2P02812 416 aaPredicted RBP14.52□□□□□ -0.09
CACNA1A-225ENST00000636389 INAFM2P0DMQ5 153 aa14.52□□□□□ -0.09
CACNA1A-225ENST00000636389 PMVKQ15126 192 aa14.52□□□□□ -0.09
CACNA1A-225ENST00000636389 MRPS18AQ9NVS2 196 aaKnown RBP14.52□□□□□ -0.09
CACNA1A-225ENST00000636389 LY75O60449 1722 aa14.51□□□□□ -0.09
CACNA1A-225ENST00000636389 C1orf100Q5SVJ3 147 aa14.51□□□□□ -0.09
CACNA1A-225ENST00000636389 MSRB2Q9Y3D2 182 aa14.51□□□□□ -0.09
CACNA1A-225ENST00000636389 IGHV3-16A0A0C4DH30 117 aa14.51□□□□□ -0.09
CACNA1A-225ENST00000636389 RAMP1O60894 148 aa14.51□□□□□ -0.09
CACNA1A-225ENST00000636389 MED12LQ86YW9 2145 aa14.51□□□□□ -0.09
CACNA1A-225ENST00000636389 IQCF6A8MYZ5 107 aa14.51□□□□□ -0.09
CACNA1A-225ENST00000636389 VCYO14598 125 aa14.51□□□□□ -0.09
CACNA1A-225ENST00000636389 MLNRO43193 412 aa14.51□□□□□ -0.09
CACNA1A-225ENST00000636389 NHSL1Q5SYE7 1610 aa14.51□□□□□ -0.09
CACNA1A-225ENST00000636389 TRAV9-1A0A075B6T8 112 aa14.51□□□□□ -0.09
CACNA1A-225ENST00000636389 HSD52Q0P140 79 aa14.51□□□□□ -0.09
CACNA1A-225ENST00000636389 FREM1Q5H8C1 2179 aa14.51□□□□□ -0.09
CACNA1A-225ENST00000636389 E9PQ18 207 aa14.5□□□□□ -0.09
CACNA1A-225ENST00000636389 HAMPP81172 84 aa14.5□□□□□ -0.09
CACNA1A-225ENST00000636389 RPL23P62829 140 aaKnown RBP14.5□□□□□ -0.09
CACNA1A-225ENST00000636389 PLAC1Q9HBJ0 212 aa14.5□□□□□ -0.09
CACNA1A-225ENST00000636389 C1QTNF9P0C862 333 aa14.5□□□□□ -0.09
CACNA1A-225ENST00000636389 ARHGAP32A7KAX9 2087 aa14.5□□□□□ -0.09
CACNA1A-225ENST00000636389 TRBV5-7A0A0A0MS05 114 aa14.5□□□□□ -0.09
CACNA1A-225ENST00000636389 SOCS3O14543 225 aa14.5□□□□□ -0.09
CACNA1A-225ENST00000636389 CLPSL2Q6UWE3 100 aa14.5□□□□□ -0.09
CACNA1A-225ENST00000636389 C14orf178Q8N769 122 aaPredicted RBP14.5□□□□□ -0.09
CACNA1A-225ENST00000636389 SBF2Q86WG5 1849 aa14.5□□□□□ -0.09
CACNA1A-225ENST00000636389 EGR2P11161 476 aaPredicted RBP14.5□□□□□ -0.09
CACNA1A-225ENST00000636389 C1orf53Q5VUE5 145 aa14.5□□□□□ -0.09
CACNA1A-225ENST00000636389 NDUFAF3Q9BU61 184 aa14.5□□□□□ -0.09
CACNA1A-225ENST00000636389 CCL20P78556 96 aa14.5□□□□□ -0.09
CACNA1A-225ENST00000636389 C1QL4Q86Z23 238 aa14.5□□□□□ -0.09
CACNA1A-225ENST00000636389 MARF1Q9Y4F3 1742 aaKnown RBP14.49□□□□□ -0.09
CACNA1A-225ENST00000636389 YPEL1O60688 119 aa14.49□□□□□ -0.09
CACNA1A-225ENST00000636389 C9orf153Q5TBE3 101 aa14.49□□□□□ -0.09
CACNA1A-225ENST00000636389 YPEL2Q96QA6 119 aa14.49□□□□□ -0.09
CACNA1A-225ENST00000636389 ZNF124Q15973 351 aa14.49□□□□□ -0.09
CACNA1A-225ENST00000636389 FAM90A1Q86YD7 464 aa14.49□□□□□ -0.09
CACNA1A-225ENST00000636389 GTSF1LQ9H1H1 148 aa14.49□□□□□ -0.09
CACNA1A-225ENST00000636389 FAM90A9PA6NNJ1 464 aa14.49□□□□□ -0.09
CACNA1A-225ENST00000636389 C9JAW5 83 aa14.49□□□□□ -0.09
CACNA1A-225ENST00000636389 BCL6BQ8N143 479 aaPredicted RBP14.49□□□□□ -0.09
CACNA1A-225ENST00000636389 CD5P06127 495 aa14.49□□□□□ -0.09
CACNA1A-225ENST00000636389 PSPNO60542 156 aa14.48□□□□□ -0.09
CACNA1A-225ENST00000636389 KLF5Q13887 457 aaPredicted RBP14.48□□□□□ -0.09
CACNA1A-225ENST00000636389 RSPO3Q9BXY4 272 aaPredicted RBP14.48□□□□□ -0.09
CACNA1A-225ENST00000636389 UBR3Q6ZT12 1888 aa14.48□□□□□ -0.09
CACNA1A-225ENST00000636389 GNB1LQ9BYB4 327 aa14.48□□□□□ -0.09
CACNA1A-225ENST00000636389 PPP1R3EQ9H7J1 279 aa14.48□□□□□ -0.09
CACNA1A-225ENST00000636389 TNRC6AQ8NDV7 1962 aaKnown RBP14.48□□□□□ -0.09
CACNA1A-225ENST00000636389 GNLYP22749 145 aa14.48□□□□□ -0.09
CACNA1A-225ENST00000636389 TPTE2P1Q5T6R2 138 aa14.48□□□□□ -0.09
CACNA1A-225ENST00000636389 TNFSF13O75888 250 aa14.48□□□□□ -0.09
CACNA1A-225ENST00000636389 C2orf16Q68DN1 1984 aa14.48□□□□□ -0.09
CACNA1A-225ENST00000636389 ADAMTSL3P82987 1691 aa14.48□□□□□ -0.09
CACNA1A-225ENST00000636389 FRMPD3Q5JV73 1810 aa14.48□□□□□ -0.09
CACNA1A-225ENST00000636389 LCTP09848 1927 aa14.48□□□□□ -0.09
CACNA1A-225ENST00000636389 SMIM2Q9BVW6 85 aa14.47□□□□□ -0.09
CACNA1A-225ENST00000636389 RBM38Q9H0Z9 239 aaKnown RBP14.47□□□□□ -0.09
CACNA1A-225ENST00000636389 ZNF319Q9P2F9 582 aa14.47□□□□□ -0.09
CACNA1A-225ENST00000636389 CHCHD2Q9Y6H1 151 aaPredicted RBP14.47□□□□□ -0.09
CACNA1A-225ENST00000636389 IGHV2-26A0A0B4J1V2 119 aa14.47□□□□□ -0.09
CACNA1A-225ENST00000636389 RPUSD1Q9UJJ7 312 aaKnown RBP14.47□□□□□ -0.09
CACNA1A-225ENST00000636389 NPDC1Q9NQX5 325 aaPredicted RBP14.47□□□□□ -0.09
CACNA1A-225ENST00000636389 EFNB3Q15768 340 aa14.47□□□□□ -0.09
CACNA1A-225ENST00000636389 BAALCQ8WXS3 180 aa14.47□□□□□ -0.09
CACNA1A-225ENST00000636389 SRP19P09132 144 aaKnown RBP14.47□□□□□ -0.09
CACNA1A-225ENST00000636389 SPACA3Q8IXA5 215 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms