RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 SMCO3A2RU48 225 aa13.78□□□□□ -0.2
CLN6-213ENST00000636212 ZNF705EA8MWA4 302 aaPredicted RBP13.78□□□□□ -0.2
CLN6-213ENST00000636212 C11orf94C9JXX5 98 aa13.78□□□□□ -0.2
CLN6-213ENST00000636212 H3BMM0 161 aa13.78□□□□□ -0.2
CLN6-213ENST00000636212 HLA-DRB4P13762 266 aa13.78□□□□□ -0.2
CLN6-213ENST00000636212 GALR1P47211 349 aa13.78□□□□□ -0.2
CLN6-213ENST00000636212 MEOX2P50222 304 aa13.78□□□□□ -0.2
CLN6-213ENST00000636212 HRH4Q9H3N8 390 aa13.78□□□□□ -0.2
CLN6-213ENST00000636212 HLA-DRB4X5D2U9 266 aa13.78□□□□□ -0.2
CLN6-213ENST00000636212 TCTAP57738 103 aa13.77□□□□□ -0.21
CLN6-213ENST00000636212 POLR2GP62487 172 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLN6-213ENST00000636212 ID3Q02535 119 aa13.77□□□□□ -0.21
CLN6-213ENST00000636212 SPATA31B1PQ5VZV4 182 aa13.77□□□□□ -0.21
CLN6-213ENST00000636212 TMEM147Q9BVK8 224 aa13.77□□□□□ -0.21
CLN6-213ENST00000636212 XCL2Q9UBD3 114 aa13.77□□□□□ -0.21
CLN6-213ENST00000636212 IGKV1OR2-108A0A075B7D4 117 aa13.76□□□□□ -0.21
CLN6-213ENST00000636212 PRSS46E5RG02 174 aa13.76□□□□□ -0.21
CLN6-213ENST00000636212 ISLRO14498 428 aa13.76□□□□□ -0.21
CLN6-213ENST00000636212 SSSCA1O60232 199 aa13.76□□□□□ -0.21
CLN6-213ENST00000636212 ORM2P19652 201 aa13.76□□□□□ -0.21
CLN6-213ENST00000636212 EBLN2Q6P2I7 272 aa13.76□□□□□ -0.21
CLN6-213ENST00000636212 FOXI2Q6ZQN5 318 aa13.76□□□□□ -0.21
CLN6-213ENST00000636212 ACOT7LQ6ZUV0 252 aa13.76□□□□□ -0.21
CLN6-213ENST00000636212 GPR82Q96P67 336 aa13.76□□□□□ -0.21
CLN6-213ENST00000636212 SLC25A22Q9H936 323 aa13.76□□□□□ -0.21
CLN6-213ENST00000636212 SCGB1D2O95969 90 aa13.75□□□□□ -0.21
CLN6-213ENST00000636212 RBMY1A1P0DJD3 496 aaKnown RBP13.75□□□□□ -0.21
CLN6-213ENST00000636212 RBMY1CP0DJD4 496 aa13.75□□□□□ -0.21
CLN6-213ENST00000636212 ANXA7P20073 488 aaKnown RBP13.75□□□□□ -0.21
CLN6-213ENST00000636212 BTCP35070 178 aa13.75□□□□□ -0.21
CLN6-213ENST00000636212 ZNF846Q147U1 533 aa13.75□□□□□ -0.21
CLN6-213ENST00000636212 RBMY1FQ15415 496 aaKnown RBP13.75□□□□□ -0.21
CLN6-213ENST00000636212 TMEM144Q7Z5S9 345 aa13.75□□□□□ -0.21
CLN6-213ENST00000636212 S100A7AQ86SG5 101 aa13.75□□□□□ -0.21
CLN6-213ENST00000636212 CSNK1G2-AS1Q8NCQ2 148 aa13.75□□□□□ -0.21
CLN6-213ENST00000636212 OR4D5Q8NGN0 318 aa13.75□□□□□ -0.21
CLN6-213ENST00000636212 OR1B1Q8NGR6 318 aa13.75□□□□□ -0.21
CLN6-213ENST00000636212 C16orf92Q96LL3 132 aa13.75□□□□□ -0.21
CLN6-213ENST00000636212 SAV1Q9H4B6 383 aaPredicted RBP13.75□□□□□ -0.21
CLN6-213ENST00000636212 RPRMQ9NS64 109 aa13.75□□□□□ -0.21
CLN6-213ENST00000636212 X6R8D5 127 aa13.75□□□□□ -0.21
CLN6-213ENST00000636212 IGKV3-20P01619 116 aa13.74□□□□□ -0.21
CLN6-213ENST00000636212 IL5P05113 134 aa13.74□□□□□ -0.21
CLN6-213ENST00000636212 IAH1Q2TAA2 248 aaPredicted RBP13.74□□□□□ -0.21
CLN6-213ENST00000636212 LGALS9CQ6DKI2 356 aa13.74□□□□□ -0.21
CLN6-213ENST00000636212 OR4B1Q8NGF8 309 aa13.74□□□□□ -0.21
CLN6-213ENST00000636212 SMIM8Q96KF7 97 aa13.74□□□□□ -0.21
CLN6-213ENST00000636212 AGRNO00468 2067 aa13.73□□□□□ -0.21
CLN6-213ENST00000636212 TRAV10A0A0B4J240 114 aa13.73□□□□□ -0.21
CLN6-213ENST00000636212 ZNF98A6NK75 572 aa13.73□□□□□ -0.21
CLN6-213ENST00000636212 LYRM1O43325 122 aa13.73□□□□□ -0.21
CLN6-213ENST00000636212 HLA-DMBP28068 263 aa13.73□□□□□ -0.21
CLN6-213ENST00000636212 RAP2BP61225 183 aa13.73□□□□□ -0.21
CLN6-213ENST00000636212 OR10P1Q8NGE3 313 aa13.73□□□□□ -0.21
CLN6-213ENST00000636212 GSKIPQ9P0R6 139 aa13.73□□□□□ -0.21
CLN6-213ENST00000636212 MGAT4CQ9UBM8 478 aa13.73□□□□□ -0.21
CLN6-213ENST00000636212 IGLL5B9A064 214 aa13.72□□□□□ -0.21
CLN6-213ENST00000636212 PLA2G10O15496 165 aa13.72□□□□□ -0.21
CLN6-213ENST00000636212 SELENOTP62341 195 aa13.72□□□□□ -0.21
CLN6-213ENST00000636212 CYP2G1PQ6ZSU1 146 aa13.72□□□□□ -0.21
CLN6-213ENST00000636212 MITD1Q8WV92 249 aa13.72□□□□□ -0.21
CLN6-213ENST00000636212 CLUHP3Q96NS8 147 aa13.72□□□□□ -0.21
CLN6-213ENST00000636212 RSG1Q9BU20 258 aa13.72□□□□□ -0.21
CLN6-213ENST00000636212 C20orf85Q9H1P6 137 aa13.72□□□□□ -0.21
CLN6-213ENST00000636212 SLC25A32Q9H2D1 315 aa13.72□□□□□ -0.21
CLN6-213ENST00000636212 SOCS3O14543 225 aa13.71□□□□□ -0.21
CLN6-213ENST00000636212 GATA2P23769 480 aaPredicted RBP13.71□□□□□ -0.21
CLN6-213ENST00000636212 TAS2R30P59541 319 aa13.71□□□□□ -0.21
CLN6-213ENST00000636212 DLK1P80370 383 aa13.71□□□□□ -0.21
CLN6-213ENST00000636212 GDF5OSQ5U4N7 250 aa13.71□□□□□ -0.21
CLN6-213ENST00000636212 ZBTB8BQ8NAP8 495 aaPredicted RBP13.71□□□□□ -0.21
CLN6-213ENST00000636212 NPVFQ9HCQ7 196 aa13.71□□□□□ -0.21
CLN6-213ENST00000636212 RNF24Q9Y225 148 aa13.71□□□□□ -0.21
CLN6-213ENST00000636212 HIGD1AQ9Y241 93 aa13.71□□□□□ -0.21
CLN6-213ENST00000636212 ELOA3CA0A087WX78 387 aaPredicted RBP13.7□□□□□ -0.22
CLN6-213ENST00000636212 TMEM189A5PLL7 270 aa13.7□□□□□ -0.22
CLN6-213ENST00000636212 SMIM9A6NGZ8 99 aa13.7□□□□□ -0.22
CLN6-213ENST00000636212 FNDC10F2Z333 226 aa13.7□□□□□ -0.22
CLN6-213ENST00000636212 TSC22D2O75157 780 aa13.7□□□□□ -0.22
CLN6-213ENST00000636212 UPK1BO75841 260 aa13.7□□□□□ -0.22
CLN6-213ENST00000636212 METTL15P1P0C7V9 234 aa13.7□□□□□ -0.22
CLN6-213ENST00000636212 FXYD7P58549 80 aa13.7□□□□□ -0.22
CLN6-213ENST00000636212 RRAS2P62070 204 aaPredicted RBP13.7□□□□□ -0.22
CLN6-213ENST00000636212 PSG9Q00887 426 aa13.7□□□□□ -0.22
CLN6-213ENST00000636212 NEU1Q99519 415 aa13.7□□□□□ -0.22
CLN6-213ENST00000636212 DOK5Q9P104 306 aa13.7□□□□□ -0.22
CLN6-213ENST00000636212 DNAH1Q9P2D7 4330 aa13.7□□□□□ -0.22
CLN6-213ENST00000636212 IGHV3OR16-12A0A075B7B8 117 aa13.69□□□□□ -0.22
CLN6-213ENST00000636212 L7N2F9 121 aa13.69□□□□□ -0.22
CLN6-213ENST00000636212 HYPMO75409 117 aa13.69□□□□□ -0.22
CLN6-213ENST00000636212 OR5G3P0C626 314 aa13.69□□□□□ -0.22
CLN6-213ENST00000636212 PAX9P55771 341 aa13.69□□□□□ -0.22
CLN6-213ENST00000636212 DEFB1P60022 68 aa13.69□□□□□ -0.22
CLN6-213ENST00000636212 VAMP2P63027 116 aa13.69□□□□□ -0.22
CLN6-213ENST00000636212 ASAH1Q13510 395 aa13.69□□□□□ -0.22
CLN6-213ENST00000636212 FAM78BQ5VT40 261 aa13.69□□□□□ -0.22
CLN6-213ENST00000636212 Q6ZTC4 211 aa13.69□□□□□ -0.22
CLN6-213ENST00000636212 SLC25A39Q9BZJ4 359 aaPredicted RBP13.69□□□□□ -0.22
CLN6-213ENST00000636212 GOLT1BQ9Y3E0 138 aa13.69□□□□□ -0.22
CLN6-213ENST00000636212 A0A0J9YX75 114 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms