RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 ZNF506Q5JVG8 444 aa19.23■□□□□ 0.67
CAPNS1-215ENST00000628018 PQLC2Q6ZP29 291 aa19.23■□□□□ 0.67
CAPNS1-215ENST00000628018 IQCF2Q8IXL9 164 aa19.23■□□□□ 0.67
CAPNS1-215ENST00000628018 OR4X2Q8NGF9 303 aa19.23■□□□□ 0.67
CAPNS1-215ENST00000628018 GNB4Q9HAV0 340 aa19.23■□□□□ 0.67
CAPNS1-215ENST00000628018 TREM1Q9NP99 234 aa19.23■□□□□ 0.67
CAPNS1-215ENST00000628018 LOC102723971A0A1B0GUV8 181 aa19.22■□□□□ 0.67
CAPNS1-215ENST00000628018 RPLP1P05386 114 aaKnown RBP19.22■□□□□ 0.67
CAPNS1-215ENST00000628018 GCHFRP30047 84 aa19.22■□□□□ 0.67
CAPNS1-215ENST00000628018 SLC25A39Q9BZJ4 359 aaPredicted RBP19.22■□□□□ 0.67
CAPNS1-215ENST00000628018 NSD1Q96L73 2696 aaPredicted RBP19.22■□□□□ 0.67
CAPNS1-215ENST00000628018 C9JQL5 133 aa19.21■□□□□ 0.67
CAPNS1-215ENST00000628018 IFNA1P01562 189 aa19.21■□□□□ 0.67
CAPNS1-215ENST00000628018 TRBV12-3P01733 135 aa19.21■□□□□ 0.67
CAPNS1-215ENST00000628018 BCL2P10415 239 aa19.21■□□□□ 0.67
CAPNS1-215ENST00000628018 ARL3P36405 182 aa19.21■□□□□ 0.67
CAPNS1-215ENST00000628018 PPT1P50897 306 aa19.21■□□□□ 0.67
CAPNS1-215ENST00000628018 RELQ04864 619 aaPredicted RBP19.21■□□□□ 0.67
CAPNS1-215ENST00000628018 ICAM4Q14773 271 aa19.21■□□□□ 0.67
CAPNS1-215ENST00000628018 TOMM20LQ6UXN7 152 aa19.21■□□□□ 0.67
CAPNS1-215ENST00000628018 KLHDC1Q8N7A1 406 aa19.21■□□□□ 0.67
CAPNS1-215ENST00000628018 OR5AU1Q8NGC0 362 aa19.21■□□□□ 0.67
CAPNS1-215ENST00000628018 SMDT1Q9H4I9 107 aa19.21■□□□□ 0.67
CAPNS1-215ENST00000628018 C16orf95Q9H693 158 aa19.21■□□□□ 0.67
CAPNS1-215ENST00000628018 ZFAND3Q9H8U3 227 aa19.21■□□□□ 0.67
CAPNS1-215ENST00000628018 MANBALQ9NQG1 85 aa19.21■□□□□ 0.67
CAPNS1-215ENST00000628018 IGHV3-35A0A0C4DH35 117 aa19.2■□□□□ 0.66
CAPNS1-215ENST00000628018 OR7C2O60412 319 aa19.2■□□□□ 0.66
CAPNS1-215ENST00000628018 FAM209BQ5JX69 171 aa19.2■□□□□ 0.66
CAPNS1-215ENST00000628018 H3BRN7 92 aa19.19■□□□□ 0.66
CAPNS1-215ENST00000628018 SUN5Q8TC36 379 aa19.19■□□□□ 0.66
CAPNS1-215ENST00000628018 SHANK2-AS3Q9BTD1 123 aa19.19■□□□□ 0.66
CAPNS1-215ENST00000628018 TMEM218A2RU14 115 aa19.18■□□□□ 0.66
CAPNS1-215ENST00000628018 ANKRD34BA5PLL1 514 aa19.18■□□□□ 0.66
CAPNS1-215ENST00000628018 TAGLN2P37802 199 aaKnown RBP19.18■□□□□ 0.66
CAPNS1-215ENST00000628018 RXFP4Q8TDU9 374 aa19.18■□□□□ 0.66
CAPNS1-215ENST00000628018 WIPF2Q8TF74 440 aaPredicted RBP19.18■□□□□ 0.66
CAPNS1-215ENST00000628018 NARS2Q96I59 477 aaKnown RBP19.18■□□□□ 0.66
CAPNS1-215ENST00000628018 UBE2E2Q96LR5 201 aa19.18■□□□□ 0.66
CAPNS1-215ENST00000628018 LINC00052Q96N35 136 aa19.18■□□□□ 0.66
CAPNS1-215ENST00000628018 TMEM167BQ9NRX6 74 aa19.18■□□□□ 0.66
CAPNS1-215ENST00000628018 PEF1Q9UBV8 284 aaKnown RBP19.18■□□□□ 0.66
CAPNS1-215ENST00000628018 VAX2Q9UIW0 290 aa19.18■□□□□ 0.66
CAPNS1-215ENST00000628018 BMPR1BO00238 502 aa19.17■□□□□ 0.66
CAPNS1-215ENST00000628018 TCF21O43680 179 aa19.17■□□□□ 0.66
CAPNS1-215ENST00000628018 S100A7AQ86SG5 101 aa19.17■□□□□ 0.66
CAPNS1-215ENST00000628018 STXBP6Q8NFX7 210 aa19.17■□□□□ 0.66
CAPNS1-215ENST00000628018 OR51M1Q9H341 326 aa19.17■□□□□ 0.66
CAPNS1-215ENST00000628018 MAST4O15021 2626 aa19.16■□□□□ 0.66
CAPNS1-215ENST00000628018 KRBOX1C9JBD0 128 aa19.16■□□□□ 0.66
CAPNS1-215ENST00000628018 PAGE4O60829 102 aa19.16■□□□□ 0.66
CAPNS1-215ENST00000628018 HSPB1P04792 205 aaKnown RBP19.16■□□□□ 0.66
CAPNS1-215ENST00000628018 LEMD1Q68G75 181 aa19.16■□□□□ 0.66
CAPNS1-215ENST00000628018 LINC01006Q8NI28 216 aa19.16■□□□□ 0.66
CAPNS1-215ENST00000628018 PAXXQ9BUH6 204 aa19.16■□□□□ 0.66
CAPNS1-215ENST00000628018 RABAC1Q9UI14 185 aa19.16■□□□□ 0.66
CAPNS1-215ENST00000628018 FN1P02751 2386 aaKnown RBP19.16■□□□□ 0.66
CAPNS1-215ENST00000628018 NDUFA7O95182 113 aa19.15■□□□□ 0.66
CAPNS1-215ENST00000628018 OR10J4P0C629 311 aa19.15■□□□□ 0.66
CAPNS1-215ENST00000628018 PYYP10082 97 aa19.15■□□□□ 0.66
CAPNS1-215ENST00000628018 ZP3P21754 424 aa19.15■□□□□ 0.66
CAPNS1-215ENST00000628018 OR5B12Q96R08 314 aa19.15■□□□□ 0.66
CAPNS1-215ENST00000628018 ZNF98A6NK75 572 aa19.15■□□□□ 0.66
CAPNS1-215ENST00000628018 NDUFA4O00483 81 aa19.15■□□□□ 0.66
CAPNS1-215ENST00000628018 GGCTO75223 188 aaKnown RBP19.15■□□□□ 0.66
CAPNS1-215ENST00000628018 SRP19P09132 144 aaKnown RBP19.15■□□□□ 0.66
CAPNS1-215ENST00000628018 GP9P14770 177 aa19.15■□□□□ 0.66
CAPNS1-215ENST00000628018 FXYD5Q96DB9 178 aa19.15■□□□□ 0.66
CAPNS1-215ENST00000628018 IGHV3OR16-8A0A075B7F1 116 aa19.14■□□□□ 0.65
CAPNS1-215ENST00000628018 CLPSL1A2RUU4 121 aa19.14■□□□□ 0.65
CAPNS1-215ENST00000628018 LGALS1P09382 135 aaKnown RBP19.14■□□□□ 0.65
CAPNS1-215ENST00000628018 SFTA3P0C7M3 94 aa19.14■□□□□ 0.65
CAPNS1-215ENST00000628018 UBE2G2P60604 165 aa19.14■□□□□ 0.65
CAPNS1-215ENST00000628018 UBE2L3P68036 154 aaKnown RBP19.14■□□□□ 0.65
CAPNS1-215ENST00000628018 MEF2BQ02080 365 aaPredicted RBP19.14■□□□□ 0.65
CAPNS1-215ENST00000628018 TCTEX1D4Q5JR98 221 aa19.14■□□□□ 0.65
CAPNS1-215ENST00000628018 SLC35B3Q9H1N7 401 aa19.14■□□□□ 0.65
CAPNS1-215ENST00000628018 TMEM14CQ9P0S9 112 aa19.14■□□□□ 0.65
CAPNS1-215ENST00000628018 NF1P21359 2839 aa19.13■□□□□ 0.65
CAPNS1-215ENST00000628018 CD81P60033 236 aa19.13■□□□□ 0.65
CAPNS1-215ENST00000628018 YTHDF2Q9Y5A9 579 aaKnown RBP19.13■□□□□ 0.65
CAPNS1-215ENST00000628018 ARL2-SNX15V9GYD0 113 aa19.13■□□□□ 0.65
CAPNS1-215ENST00000628018 FAM74A7A6NL05 159 aa19.12■□□□□ 0.65
CAPNS1-215ENST00000628018 ADCYAP1P18509 176 aa19.12■□□□□ 0.65
CAPNS1-215ENST00000628018 S100A7P31151 101 aa19.12■□□□□ 0.65
CAPNS1-215ENST00000628018 NDUFS6O75380 124 aaKnown RBP19.11■□□□□ 0.65
CAPNS1-215ENST00000628018 CDX1P47902 265 aaPredicted RBP19.11■□□□□ 0.65
CAPNS1-215ENST00000628018 TXNDC17Q9BRA2 123 aa19.11■□□□□ 0.65
CAPNS1-215ENST00000628018 F8P00451 2351 aa19.11■□□□□ 0.65
CAPNS1-215ENST00000628018 C11orf94C9JXX5 98 aa19.1■□□□□ 0.65
CAPNS1-215ENST00000628018 C10orf91Q5T1B1 145 aa19.1■□□□□ 0.65
CAPNS1-215ENST00000628018 BPIFA4PQ86YQ2 179 aa19.1■□□□□ 0.65
CAPNS1-215ENST00000628018 RNF24Q9Y225 148 aa19.1■□□□□ 0.65
CAPNS1-215ENST00000628018 MRPS12O15235 138 aaKnown RBP19.1■□□□□ 0.65
CAPNS1-215ENST00000628018 ATP5G3P48201 142 aa19.1■□□□□ 0.65
CAPNS1-215ENST00000628018 CST9LP1Q5W188 147 aa19.1■□□□□ 0.65
CAPNS1-215ENST00000628018 UNQ9165/PRO28630Q6UXU0 137 aa19.1■□□□□ 0.65
CAPNS1-215ENST00000628018 SEC11CQ9BY50 192 aa19.1■□□□□ 0.65
CAPNS1-215ENST00000628018 A0A1W2PRE2 83 aa19.09■□□□□ 0.65
CAPNS1-215ENST00000628018 F8W036 122 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms