RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 PAX2Q02962 417 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 Q6ZS92 163 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 OR9G4Q8NGQ1 327 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 RCHY1Q96PM5 261 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 TMEM8BA6NDV4 472 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 IGHG3P01860 377 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 TCRAP04437 139 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 COL8A2P25067 703 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 RPP25LQ8N5L8 163 aaKnown RBP10.48□□□□□ -0.73
SCN8A-209ENST00000627620 THADAQ6YHU6 1953 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 TRBV6-6A0A0A6YYG2 114 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 FREM3P0C091 2139 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 ZNF688P0C7X2 276 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 TMEM95Q3KNT9 176 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 TRBV7-1A0A0A6YYK4 115 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 A0A0U1RRA0 63 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 MTURNQ8N3F0 131 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 OR5A1Q8NGJ0 315 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 VGLL1Q99990 258 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 IGHV3-64A0A075B6Q5 118 aa10.47□□□□□ -0.73
SCN8A-209ENST00000627620 CD300EQ496F6 205 aaPredicted RBP10.47□□□□□ -0.73
SCN8A-209ENST00000627620 ZNF474Q6S9Z5 364 aaPredicted RBP10.47□□□□□ -0.73
SCN8A-209ENST00000627620 TMEM242Q9NWH2 141 aa10.47□□□□□ -0.73
SCN8A-209ENST00000627620 TRAV1-1A0A0B4J248 108 aa10.47□□□□□ -0.73
SCN8A-209ENST00000627620 NCR2O95944 276 aa10.47□□□□□ -0.73
SCN8A-209ENST00000627620 ZNF581Q9P0T4 197 aa10.47□□□□□ -0.73
SCN8A-209ENST00000627620 IGHV3-73A0A0B4J1V6 119 aa10.47□□□□□ -0.73
SCN8A-209ENST00000627620 GHRHP01286 108 aa10.47□□□□□ -0.73
SCN8A-209ENST00000627620 PLNP26678 52 aa10.47□□□□□ -0.73
SCN8A-209ENST00000627620 LAGE3Q14657 143 aa10.47□□□□□ -0.73
SCN8A-209ENST00000627620 LYPD2Q6UXB3 125 aa10.47□□□□□ -0.73
SCN8A-209ENST00000627620 LY6HO94772 140 aa10.47□□□□□ -0.73
SCN8A-209ENST00000627620 FAM169BQ8N8A8 192 aa10.47□□□□□ -0.73
SCN8A-209ENST00000627620 PRADC1Q9BSG0 188 aa10.47□□□□□ -0.73
SCN8A-209ENST00000627620 DERL1Q9BUN8 251 aa10.47□□□□□ -0.73
SCN8A-209ENST00000627620 SIGLEC9Q9Y336 463 aa10.47□□□□□ -0.73
SCN8A-209ENST00000627620 CACNA1GO43497 2377 aa10.47□□□□□ -0.73
SCN8A-209ENST00000627620 SRRM4A7MD48 611 aaKnown RBP10.46□□□□□ -0.73
SCN8A-209ENST00000627620 ZNF138P52744 262 aa10.46□□□□□ -0.73
SCN8A-209ENST00000627620 LINC00205P59089 165 aa10.46□□□□□ -0.73
SCN8A-209ENST00000627620 TMEM190Q8WZ59 177 aa10.46□□□□□ -0.73
SCN8A-209ENST00000627620 LOC105371267A0A1B0GV96 52 aa10.46□□□□□ -0.73
SCN8A-209ENST00000627620 QRFPP83859 136 aa10.46□□□□□ -0.73
SCN8A-209ENST00000627620 PRR31Q5SQ13 230 aa10.46□□□□□ -0.73
SCN8A-209ENST00000627620 LYZL1Q6UWQ5 148 aa10.46□□□□□ -0.73
SCN8A-209ENST00000627620 C9orf139Q6ZV77 190 aa10.46□□□□□ -0.73
SCN8A-209ENST00000627620 LTBP1Q14766 1721 aa10.46□□□□□ -0.73
SCN8A-209ENST00000627620 HOXA3O43365 443 aaPredicted RBP10.46□□□□□ -0.73
SCN8A-209ENST00000627620 PIP4P2Q8N4L2 257 aa10.46□□□□□ -0.73
SCN8A-209ENST00000627620 D6R8Y8 96 aa10.46□□□□□ -0.74
SCN8A-209ENST00000627620 CXCL1P09341 107 aa10.46□□□□□ -0.74
SCN8A-209ENST00000627620 NTF4P34130 210 aa10.46□□□□□ -0.74
SCN8A-209ENST00000627620 RFNGQ9Y644 331 aa10.46□□□□□ -0.74
SCN8A-209ENST00000627620 TRBV24-1A0A075B6N3 115 aa10.46□□□□□ -0.74
SCN8A-209ENST00000627620 ZNF329Q86UD4 541 aa10.46□□□□□ -0.74
SCN8A-209ENST00000627620 LINC01551Q86U37 167 aa10.45□□□□□ -0.74
SCN8A-209ENST00000627620 FCN3O75636 299 aa10.45□□□□□ -0.74
SCN8A-209ENST00000627620 ZNF876PQ49A33 203 aa10.45□□□□□ -0.74
SCN8A-209ENST00000627620 ACTL10Q5JWF8 245 aa10.45□□□□□ -0.74
SCN8A-209ENST00000627620 NDUFAF3Q9BU61 184 aa10.45□□□□□ -0.74
SCN8A-209ENST00000627620 FNDC4Q9H6D8 234 aaPredicted RBP10.45□□□□□ -0.74
SCN8A-209ENST00000627620 Q8TAT8 98 aa10.45□□□□□ -0.74
SCN8A-209ENST00000627620 A0A087WX48 190 aa10.45□□□□□ -0.74
SCN8A-209ENST00000627620 CRIM1Q9NZV1 1036 aa10.45□□□□□ -0.74
SCN8A-209ENST00000627620 MED12Q93074 2177 aa10.45□□□□□ -0.74
SCN8A-209ENST00000627620 TRGV1A0A0A0MS02 117 aa10.45□□□□□ -0.74
SCN8A-209ENST00000627620 TRAV8-2A0A0B4J237 113 aa10.45□□□□□ -0.74
SCN8A-209ENST00000627620 PCP4P48539 62 aa10.45□□□□□ -0.74
SCN8A-209ENST00000627620 DEFB104AQ8WTQ1 72 aa10.45□□□□□ -0.74
SCN8A-209ENST00000627620 USMG5Q96IX5 58 aa10.45□□□□□ -0.74
SCN8A-209ENST00000627620 HIST1H2BLQ99880 126 aa10.45□□□□□ -0.74
SCN8A-209ENST00000627620 SLC25A2Q9BXI2 301 aa10.45□□□□□ -0.74
SCN8A-209ENST00000627620 BPESC1Q9GZL8 116 aa10.45□□□□□ -0.74
SCN8A-209ENST00000627620 LINC01549A6NIU2 74 aa10.44□□□□□ -0.74
SCN8A-209ENST00000627620 LINC00158P58513 81 aa10.44□□□□□ -0.74
SCN8A-209ENST00000627620 FXYD7P58549 80 aa10.44□□□□□ -0.74
SCN8A-209ENST00000627620 CLDN16Q9Y5I7 305 aa10.44□□□□□ -0.74
SCN8A-209ENST00000627620 A0A1B0GW64 132 aa10.44□□□□□ -0.74
SCN8A-209ENST00000627620 RPL35AP18077 110 aaKnown RBP10.44□□□□□ -0.74
SCN8A-209ENST00000627620 TMEM86BQ8N661 226 aa10.44□□□□□ -0.74
SCN8A-209ENST00000627620 SH2D1AO60880 128 aa10.44□□□□□ -0.74
SCN8A-209ENST00000627620 IGFL4Q6B9Z1 124 aa10.44□□□□□ -0.74
SCN8A-209ENST00000627620 LCN12Q6JVE5 192 aa10.44□□□□□ -0.74
SCN8A-209ENST00000627620 FOXL2NBQ6ZUU3 175 aa10.44□□□□□ -0.74
SCN8A-209ENST00000627620 GLRX5Q86SX6 157 aa10.44□□□□□ -0.74
SCN8A-209ENST00000627620 ORAOV1Q8WV07 137 aa10.44□□□□□ -0.74
SCN8A-209ENST00000627620 SPTBN1Q01082 2364 aaKnown RBP10.44□□□□□ -0.74
SCN8A-209ENST00000627620 NCOR1O75376 2440 aa10.44□□□□□ -0.74
SCN8A-209ENST00000627620 LINC00477Q96M19 166 aa10.43□□□□□ -0.74
SCN8A-209ENST00000627620 SMPXQ9UHP9 88 aa10.43□□□□□ -0.74
SCN8A-209ENST00000627620 LINC00587B1AMM8 73 aa10.43□□□□□ -0.74
SCN8A-209ENST00000627620 LCNL1Q6ZST4 164 aa10.43□□□□□ -0.74
SCN8A-209ENST00000627620 E7EQL1 145 aa10.43□□□□□ -0.74
SCN8A-209ENST00000627620 UBE2CO00762 179 aa10.43□□□□□ -0.74
SCN8A-209ENST00000627620 PSG3Q16557 428 aa10.43□□□□□ -0.74
SCN8A-209ENST00000627620 KLHL30-AS1Q8NEE0 82 aa10.43□□□□□ -0.74
SCN8A-209ENST00000627620 RPL36AP83881 106 aaKnown RBP10.43□□□□□ -0.74
SCN8A-209ENST00000627620 TMEM249Q2WGJ8 235 aa10.43□□□□□ -0.74
SCN8A-209ENST00000627620 MORN3Q6PF18 240 aaPredicted RBP10.43□□□□□ -0.74
SCN8A-209ENST00000627620 RPL36ALQ969Q0 106 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms