RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 RAB4BP61018 213 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 LYZP61626 148 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 MRPL54Q6P161 138 aaKnown RBP6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 C5orf17Q8NAS9 161 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 NPBQ8NG41 125 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 C14orf144Q96I85 54 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 ATG101Q9BSB4 218 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 POLQO75417 2590 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 NDUFA3O95167 84 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 HIST1H1EP10412 219 aaKnown RBP6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 KLRD1Q13241 179 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 USF2Q15853 346 aaPredicted RBP6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 LEMD1Q68G75 181 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 PRR27Q6MZM9 219 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 RASL11AQ6T310 242 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 ZNF600Q6ZNG1 722 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 REC114Q7Z4M0 266 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 GPR82Q96P67 336 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 SLC25A39Q9BZJ4 359 aaPredicted RBP6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 Q9H3A6 140 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 C7orf69Q9H7B7 122 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 ZNF331Q9NQX6 463 aaPredicted RBP6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 TMEM14CQ9P0S9 112 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 WNK2Q9Y3S1 2297 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 ZNF462Q96JM2 2506 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 K7EIM0 57 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 TOMM40O96008 361 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 GPR6P46095 362 aaPredicted RBP6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 OR10J3Q5JRS4 329 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 ASPHD1Q5U4P2 390 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 DTX2Q86UW9 622 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 LURAP1LQ8IV03 231 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 WIPF2Q8TF74 440 aaPredicted RBP6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 FMC1Q96HJ9 113 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 GNB4Q9HAV0 340 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 NAGKQ9UJ70 344 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 RPH3ALQ9UNE2 315 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 A8MWP6 167 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 F2Z2F3 143 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 IGKV1-17P01599 117 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 TCRAP04437 139 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 HES1Q14469 280 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 UNQ6494/PRO21346Q6UXR6 183 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 C1orf122Q6ZSJ8 110 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 TSKUQ8WUA8 353 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 TMEM68Q96MH6 324 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 MLST8Q9BVC4 326 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 OTORQ9NRC9 128 aa6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 MRPL27Q9P0M9 148 aaKnown RBP6.59□□□□□ -1.35
SND1-IT1-201ENST00000623342 FBN2P35556 2912 aa6.59□□□□□ -1.36
SND1-IT1-201ENST00000623342 H3BTX0 84 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 APCSP02743 223 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 CD24P25063 80 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 BRS3P32247 399 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 C5orf64Q2M2E5 130 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 KIAA1644Q3SXP7 199 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 NUP35Q8NFH5 326 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 SGK494Q96LW2 274 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 FAM103A1Q9BTL3 118 aaKnown RBP6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 SAMD10Q9BYL1 202 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 CHD6Q8TD26 2715 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 A0A1W2PRD5 423 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 A0A1W2PRF3 423 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 A0A1W2PRM7 423 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 BMPR1BO00238 502 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 LTAP01374 205 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 SRIP30626 198 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 CCDC144NLQ6NUI1 221 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 Q6ZWC4 215 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 VMO1Q7Z5L0 202 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 KIR3DL3Q8N743 410 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 IGFBPL1Q8WX77 278 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 RBM14Q96PK6 669 aaKnown RBP6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 HSPB9Q9BQS6 159 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 ZNF586Q9NXT0 402 aa6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 ZNF469Q96JG9 3925 aaPredicted RBP6.58□□□□□ -1.36
SND1-IT1-201ENST00000623342 OOSP1A8MZH6 123 aa6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 TMEM190Q8WZ59 177 aa6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 NEU1Q99519 415 aa6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 SHANK2-AS3Q9BTD1 123 aa6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 ZNF492Q9P255 531 aa6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 RNF24Q9Y225 148 aa6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 NPIPB5A8MRT5 1133 aa6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 HIGD1CA8MV81 97 aa6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 ZNF705FA8MVS1 300 aaPredicted RBP6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 ZNF253O75346 499 aa6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 ZNF705DP0CH99 300 aaPredicted RBP6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 ZNF705BP0CI00 300 aaPredicted RBP6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 SLAQ13239 276 aa6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 FBLN7Q53RD9 439 aa6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 FAM208BQ5VWN6 2430 aa6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 ZNF562Q6V9R5 426 aa6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 ATP5L2Q7Z4Y8 100 aa6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 BPIFA4PQ86YQ2 179 aa6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 SIGLECL1Q8N7X8 197 aa6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 KCNS1Q96KK3 526 aa6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 RPP21Q9H633 154 aaKnown RBP6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 POLR3KQ9Y2Y1 108 aaPredicted RBP6.57□□□□□ -1.36
SND1-IT1-201ENST00000623342 TRAV30A0A087WSZ9 112 aa6.56□□□□□ -1.36
SND1-IT1-201ENST00000623342 H3BRN7 92 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms