RNA–Protein interactions for RNA: ENST00000623219.3

LINC00643-205, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 962 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-205ENST00000623219 RCL1Q9Y2P8 373 aaKnown RBP10.8□□□□□ -0.68
LINC00643-205ENST00000623219 TRAV6A0A075B6T7 132 aa10.79□□□□□ -0.68
LINC00643-205ENST00000623219 SMCO3A2RU48 225 aa10.79□□□□□ -0.68
LINC00643-205ENST00000623219 FNDC10F2Z333 226 aa10.79□□□□□ -0.68
LINC00643-205ENST00000623219 SOCS3O14543 225 aa10.79□□□□□ -0.68
LINC00643-205ENST00000623219 TSC22D2O75157 780 aa10.79□□□□□ -0.68
LINC00643-205ENST00000623219 HLA-DRB4P13762 266 aa10.79□□□□□ -0.68
LINC00643-205ENST00000623219 TAS2R30P59541 319 aa10.79□□□□□ -0.68
LINC00643-205ENST00000623219 NUTF2P61970 127 aaKnown RBP10.79□□□□□ -0.68
LINC00643-205ENST00000623219 SAMD13Q5VXD3 122 aa10.79□□□□□ -0.68
LINC00643-205ENST00000623219 CEMP1Q6PRD7 247 aaPredicted RBP10.79□□□□□ -0.68
LINC00643-205ENST00000623219 TMEM14EPQ6UXP3 125 aa10.79□□□□□ -0.68
LINC00643-205ENST00000623219 OR8I2Q8N0Y5 310 aa10.79□□□□□ -0.68
LINC00643-205ENST00000623219 S100ZQ8WXG8 99 aa10.79□□□□□ -0.68
LINC00643-205ENST00000623219 WDR12Q9GZL7 423 aaKnown RBP10.79□□□□□ -0.68
LINC00643-205ENST00000623219 MFFQ9GZY8 342 aa10.79□□□□□ -0.68
LINC00643-205ENST00000623219 HLA-DRB4X5D2U9 266 aa10.79□□□□□ -0.68
LINC00643-205ENST00000623219 ZNF705EA8MWA4 302 aaPredicted RBP10.78□□□□□ -0.68
LINC00643-205ENST00000623219 ID1P41134 155 aa10.78□□□□□ -0.68
LINC00643-205ENST00000623219 MEOX2P50222 304 aa10.78□□□□□ -0.68
LINC00643-205ENST00000623219 PAX9P55771 341 aa10.78□□□□□ -0.68
LINC00643-205ENST00000623219 DLK1P80370 383 aa10.78□□□□□ -0.68
LINC00643-205ENST00000623219 Q8NAQ8 132 aa10.78□□□□□ -0.68
LINC00643-205ENST00000623219 ZNF431Q8TF32 576 aaPredicted RBP10.78□□□□□ -0.68
LINC00643-205ENST00000623219 TMEM147Q9BVK8 224 aa10.78□□□□□ -0.68
LINC00643-205ENST00000623219 C1QTNF4Q9BXJ3 329 aa10.78□□□□□ -0.68
LINC00643-205ENST00000623219 KLK5Q9Y337 293 aaPredicted RBP10.78□□□□□ -0.68
LINC00643-205ENST00000623219 ZNF98A6NK75 572 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 H3BMM0 161 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 ISLRO14498 428 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 CCSO14618 274 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 METTL15P1P0C7V9 234 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 MIFP14174 115 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 ORM2P19652 201 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 GATA2P23769 480 aaPredicted RBP10.77□□□□□ -0.69
LINC00643-205ENST00000623219 GALR1P47211 349 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 ZNF846Q147U1 533 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 CYP2G1PQ6ZSU1 146 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 CSNK1G2-AS1Q8NCQ2 148 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 OR10P1Q8NGE3 313 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 OR1B1Q8NGR6 318 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 C11orf45Q8TAV5 145 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 PHLDA1Q8WV24 401 aaPredicted RBP10.77□□□□□ -0.69
LINC00643-205ENST00000623219 LINC00476Q8WZB0 136 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 GPR82Q96P67 336 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 SLC25A32Q9H2D1 315 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 SLC25A22Q9H936 323 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 GSKIPQ9P0R6 139 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 MGAT4CQ9UBM8 478 aa10.77□□□□□ -0.69
LINC00643-205ENST00000623219 CCNKO75909 580 aa10.76□□□□□ -0.69
LINC00643-205ENST00000623219 MBPP02686 304 aaPredicted RBP10.76□□□□□ -0.69
LINC00643-205ENST00000623219 RRAS2P62070 204 aaPredicted RBP10.76□□□□□ -0.69
LINC00643-205ENST00000623219 SELENOTP62341 195 aa10.76□□□□□ -0.69
LINC00643-205ENST00000623219 MZT2BQ6NZ67 158 aa10.76□□□□□ -0.69
LINC00643-205ENST00000623219 TMEM182Q6ZP80 229 aaPredicted RBP10.76□□□□□ -0.69
LINC00643-205ENST00000623219 FOXI2Q6ZQN5 318 aa10.76□□□□□ -0.69
LINC00643-205ENST00000623219 SEC22CQ9BRL7 303 aa10.76□□□□□ -0.69
LINC00643-205ENST00000623219 SAV1Q9H4B6 383 aaPredicted RBP10.76□□□□□ -0.69
LINC00643-205ENST00000623219 NPVFQ9HCQ7 196 aa10.76□□□□□ -0.69
LINC00643-205ENST00000623219 CLEC5AQ9NY25 188 aa10.76□□□□□ -0.69
LINC00643-205ENST00000623219 TBC1D24Q9ULP9 559 aa10.76□□□□□ -0.69
LINC00643-205ENST00000623219 IGHV4-28A0A0C4DH34 117 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 FAM240BA0A1B0GVZ2 78 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 C7orf66A4D0T2 115 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 H3BRN7 92 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 K7EPK0 472 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 DEFB4AO15263 64 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 IL5P05113 134 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 H2AFB2P0C5Z0 115 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 LINC00869P0C866 280 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 PLP1P60201 277 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 ASAH1Q13510 395 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 GDF5OSQ5U4N7 250 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 SPATA31B1PQ5VZV4 182 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 TEPPQ6URK8 271 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 LINC00052Q96N35 136 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 CLUHP3Q96NS8 147 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 HRH4Q9H3N8 390 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 X6R8D5 127 aa10.75□□□□□ -0.69
LINC00643-205ENST00000623219 FAM25EA8MYX2 175 aa10.74□□□□□ -0.69
LINC00643-205ENST00000623219 NANOS2P60321 138 aaKnown RBP10.74□□□□□ -0.69
LINC00643-205ENST00000623219 RAP2BP61225 183 aa10.74□□□□□ -0.69
LINC00643-205ENST00000623219 S100A7AQ86SG5 101 aa10.74□□□□□ -0.69
LINC00643-205ENST00000623219 C12orf45Q8N5I9 185 aaPredicted RBP10.74□□□□□ -0.69
LINC00643-205ENST00000623219 C16orf92Q96LL3 132 aa10.74□□□□□ -0.69
LINC00643-205ENST00000623219 GGACTQ9BVM4 153 aa10.74□□□□□ -0.69
LINC00643-205ENST00000623219 SCRT1Q9BWW7 348 aa10.74□□□□□ -0.69
LINC00643-205ENST00000623219 SLC25A39Q9BZJ4 359 aaPredicted RBP10.74□□□□□ -0.69
LINC00643-205ENST00000623219 DOK5Q9P104 306 aa10.74□□□□□ -0.69
LINC00643-205ENST00000623219 HIGD1AQ9Y241 93 aa10.74□□□□□ -0.69
LINC00643-205ENST00000623219 C5orf51A6NDU8 294 aa10.73□□□□□ -0.69
LINC00643-205ENST00000623219 A6NHS1 94 aa10.73□□□□□ -0.69
LINC00643-205ENST00000623219 L7N2F9 121 aa10.73□□□□□ -0.69
LINC00643-205ENST00000623219 RBMY1A1P0DJD3 496 aaKnown RBP10.73□□□□□ -0.69
LINC00643-205ENST00000623219 RBMY1CP0DJD4 496 aa10.73□□□□□ -0.69
LINC00643-205ENST00000623219 VAMP2P63027 116 aa10.73□□□□□ -0.69
LINC00643-205ENST00000623219 RBMY1FQ15415 496 aaKnown RBP10.73□□□□□ -0.69
LINC00643-205ENST00000623219 ZNF546Q86UE3 836 aa10.73□□□□□ -0.69
LINC00643-205ENST00000623219 C2orf50Q96LR7 162 aa10.73□□□□□ -0.69
LINC00643-205ENST00000623219 SHANK2-AS3Q9BTD1 123 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 234.2 ms