RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 GLMPQ8WWB7 406 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 PROCRQ9UNN8 238 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 SVILO95425 2214 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 TRGV10A0A0A0MS01 117 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 GAGE12JA6NER3 117 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 PRSS46E5RG02 174 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 WIPF1O43516 503 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 GAGE7O76087 117 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 GAGE12FP0CL80 117 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 GAGE12GP0CL81 117 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 GAGE12IP0CL82 117 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 MGST1P10620 155 aaKnown RBP10.07□□□□□ -0.8
LITAF-221ENST00000622633 RPL8P62917 257 aaKnown RBP10.07□□□□□ -0.8
LITAF-221ENST00000622633 MZT1Q08AG7 82 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 GAGE4Q13068 117 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 Q6AWC8 147 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 GTSF1Q8WW33 167 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 DKK4Q9UBT3 224 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 TCF19Q9Y242 345 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 HCFC1P51610 2035 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 CADP27708 2225 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 TRAV17A0A0B4J275 112 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 FAM90A9PA6NNJ1 464 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 SPRY3O43610 288 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 MPDU1O75352 247 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 TEPPQ6URK8 271 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 PPP1R35Q8TAP8 253 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 H1FXQ92522 213 aaKnown RBP10.07□□□□□ -0.8
LITAF-221ENST00000622633 DAZAP1Q96EP5 407 aaKnown RBP10.07□□□□□ -0.8
LITAF-221ENST00000622633 C1orf159Q96HA4 380 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 NGBQ9NPG2 151 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 CALYQ9NYX4 217 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 SLC25A15Q9Y619 301 aa10.07□□□□□ -0.8
LITAF-221ENST00000622633 INTS1Q8N201 2190 aaKnown RBP10.07□□□□□ -0.8
LITAF-221ENST00000622633 ASPMQ8IZT6 3477 aa10.06□□□□□ -0.8
LITAF-221ENST00000622633 SAP30LQ9HAJ7 183 aa10.06□□□□□ -0.8
LITAF-221ENST00000622633 M0R1B8 84 aa10.06□□□□□ -0.8
LITAF-221ENST00000622633 MYOD1P15172 320 aa10.06□□□□□ -0.8
LITAF-221ENST00000622633 LEPROTL1O95214 131 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 CXorf1O96002 111 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 DIAPH2-AS1Q14236 149 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 C17orf58Q2M2W7 97 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 CT45A1Q5HYN5 189 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 LCNL1Q6ZST4 164 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 SEM1Q6ZVN7 128 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 SSX8Q7RTT4 187 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 CT45A3Q8NHU0 189 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 YTHDF2Q9Y5A9 579 aaKnown RBP10.05□□□□□ -0.8
LITAF-221ENST00000622633 SPENQ96T58 3664 aaKnown RBP10.05□□□□□ -0.8
LITAF-221ENST00000622633 CFAP47Q6ZTR5 3102 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 IGHV1-24A0A0C4DH33 117 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 PRSS29PA6NIE9 313 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 SCGB2A1O75556 95 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 FOXH1O75593 365 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 SMIM13P0DJ93 91 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 DUX4L9Q6RFH8 374 aaPredicted RBP10.05□□□□□ -0.8
LITAF-221ENST00000622633 IGFL2Q6UWQ7 119 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 ITLN1Q8WWA0 313 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 PRO0461Q9UI25 63 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 LY96Q9Y6Y9 160 aa10.05□□□□□ -0.8
LITAF-221ENST00000622633 TET2Q6N021 2002 aaPredicted RBP10.04□□□□□ -0.8
LITAF-221ENST00000622633 CGB3P0DN86 165 aa10.04□□□□□ -0.8
LITAF-221ENST00000622633 CGB7P0DN87 165 aa10.04□□□□□ -0.8
LITAF-221ENST00000622633 DEFB109BQ30KR1 87 aa10.04□□□□□ -0.8
LITAF-221ENST00000622633 ZFAND6Q6FIF0 208 aa10.04□□□□□ -0.8
LITAF-221ENST00000622633 TEX45Q8NA69 505 aa10.04□□□□□ -0.8
LITAF-221ENST00000622633 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.04□□□□□ -0.8
LITAF-221ENST00000622633 NRGNQ92686 78 aa10.04□□□□□ -0.8
LITAF-221ENST00000622633 LSM4Q9Y4Z0 139 aaKnown RBP10.04□□□□□ -0.8
LITAF-221ENST00000622633 ICE1Q9Y2F5 2266 aa10.04□□□□□ -0.8
LITAF-221ENST00000622633 C15orf61A6NNL5 157 aa10.04□□□□□ -0.8
LITAF-221ENST00000622633 C9JCJ5 164 aa10.04□□□□□ -0.8
LITAF-221ENST00000622633 TGFAP01135 160 aa10.04□□□□□ -0.8
LITAF-221ENST00000622633 GCHFRP30047 84 aa10.04□□□□□ -0.8
LITAF-221ENST00000622633 RPL31P62899 125 aaKnown RBP10.04□□□□□ -0.8
LITAF-221ENST00000622633 FOXI1Q12951 378 aa10.04□□□□□ -0.8
LITAF-221ENST00000622633 FXYD3Q14802 87 aa10.04□□□□□ -0.8
LITAF-221ENST00000622633 GDF5OSQ5U4N7 250 aa10.04□□□□□ -0.8
LITAF-221ENST00000622633 DEFB108BQ8NET1 73 aa10.04□□□□□ -0.8
LITAF-221ENST00000622633 RNASE7Q9H1E1 156 aaKnown RBP10.04□□□□□ -0.8
LITAF-221ENST00000622633 TMEM133Q9H2Q1 129 aa10.04□□□□□ -0.8
LITAF-221ENST00000622633 H3BMG7 143 aa10.03□□□□□ -0.8
LITAF-221ENST00000622633 LHBP01229 141 aa10.03□□□□□ -0.8
LITAF-221ENST00000622633 SAA2P0DJI9 122 aaPredicted RBP10.03□□□□□ -0.8
LITAF-221ENST00000622633 KIR2DS2P43631 304 aa10.03□□□□□ -0.8
LITAF-221ENST00000622633 EFNB3Q15768 340 aa10.03□□□□□ -0.8
LITAF-221ENST00000622633 TXNDC17Q9BRA2 123 aa10.03□□□□□ -0.8
LITAF-221ENST00000622633 INSIG2Q9Y5U4 225 aa10.03□□□□□ -0.8
LITAF-221ENST00000622633 CACNA1GO43497 2377 aa10.03□□□□□ -0.8
LITAF-221ENST00000622633 HSPE1P61604 102 aaKnown RBP10.02□□□□□ -0.8
LITAF-221ENST00000622633 LINC01545Q5VT33 79 aa10.02□□□□□ -0.8
LITAF-221ENST00000622633 ZNF474Q6S9Z5 364 aaPredicted RBP10.02□□□□□ -0.8
LITAF-221ENST00000622633 DEFB124Q8NES8 71 aa10.02□□□□□ -0.8
LITAF-221ENST00000622633 ZNF502Q8TBZ5 544 aa10.02□□□□□ -0.8
LITAF-221ENST00000622633 ZFHX4Q86UP3 3567 aa10.02□□□□□ -0.81
LITAF-221ENST00000622633 TRGV8A0A0C4DH27 118 aa10.02□□□□□ -0.81
LITAF-221ENST00000622633 SMIM27A0A1W2PRY6 76 aa10.02□□□□□ -0.81
LITAF-221ENST00000622633 A1L4Q6 167 aa10.02□□□□□ -0.81
LITAF-221ENST00000622633 CT45A10P0DMU9 189 aa10.02□□□□□ -0.81
LITAF-221ENST00000622633 RPRMLQ8N4K4 120 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms