RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 A0A0G2JLM5 398 aa10.51□□□□□ -0.73
CHD1L-210ENST00000622533 K7EP34 96 aa10.51□□□□□ -0.73
CHD1L-210ENST00000622533 FDCSPQ8NFU4 85 aa10.51□□□□□ -0.73
CHD1L-210ENST00000622533 OR2K2Q8NGT1 345 aa10.51□□□□□ -0.73
CHD1L-210ENST00000622533 OR10AG1Q8NH19 301 aa10.51□□□□□ -0.73
CHD1L-210ENST00000622533 TPRP12270 2363 aaKnown RBP10.5□□□□□ -0.73
CHD1L-210ENST00000622533 PCNX2A6NKB5 2137 aa10.5□□□□□ -0.73
CHD1L-210ENST00000622533 hADV38S2A0JD32 116 aa10.5□□□□□ -0.73
CHD1L-210ENST00000622533 MBD3L4A6NDZ8 208 aaPredicted RBP10.5□□□□□ -0.73
CHD1L-210ENST00000622533 MBD3L3A6NE82 208 aaPredicted RBP10.5□□□□□ -0.73
CHD1L-210ENST00000622533 MBD3L5A6NJ08 208 aaPredicted RBP10.5□□□□□ -0.73
CHD1L-210ENST00000622533 SEC11AP67812 179 aa10.5□□□□□ -0.73
CHD1L-210ENST00000622533 NEGR1Q7Z3B1 354 aa10.5□□□□□ -0.73
CHD1L-210ENST00000622533 MBD3L2Q8NHZ7 208 aaPredicted RBP10.5□□□□□ -0.73
CHD1L-210ENST00000622533 TNFRSF14Q92956 283 aa10.5□□□□□ -0.73
CHD1L-210ENST00000622533 GAFA1Q96PS6 74 aa10.5□□□□□ -0.73
CHD1L-210ENST00000622533 GTSF1LQ9H1H1 148 aa10.5□□□□□ -0.73
CHD1L-210ENST00000622533 C7orf69Q9H7B7 122 aa10.5□□□□□ -0.73
CHD1L-210ENST00000622533 SPTA1P02549 2419 aa10.5□□□□□ -0.73
CHD1L-210ENST00000622533 SAA1P0DJI8 122 aaPredicted RBP10.5□□□□□ -0.73
CHD1L-210ENST00000622533 PPIAL4GP0DN37 164 aa10.5□□□□□ -0.73
CHD1L-210ENST00000622533 RPL24P83731 157 aaKnown RBP10.5□□□□□ -0.73
CHD1L-210ENST00000622533 MEF2CQ06413 473 aaPredicted RBP10.5□□□□□ -0.73
CHD1L-210ENST00000622533 KIR3DS1Q14943 382 aa10.5□□□□□ -0.73
CHD1L-210ENST00000622533 FAM162BQ5T6X4 162 aa10.5□□□□□ -0.73
CHD1L-210ENST00000622533 TMEM108Q6UXF1 575 aa10.5□□□□□ -0.73
CHD1L-210ENST00000622533 ATP5L2Q7Z4Y8 100 aa10.5□□□□□ -0.73
CHD1L-210ENST00000622533 BLNKQ8WV28 456 aa10.5□□□□□ -0.73
CHD1L-210ENST00000622533 PERPQ96FX8 193 aa10.5□□□□□ -0.73
CHD1L-210ENST00000622533 KALRNO60229 2985 aa10.49□□□□□ -0.73
CHD1L-210ENST00000622533 OR5AL1P0C617 328 aa10.49□□□□□ -0.73
CHD1L-210ENST00000622533 SUB1P53999 127 aaKnown RBP eCLIP10.49□□□□□ -0.736e-11■■■■■ 33.7
CHD1L-210ENST00000622533 PLP1P60201 277 aa10.49□□□□□ -0.73
CHD1L-210ENST00000622533 OR10W1Q8NGF6 305 aa10.49□□□□□ -0.73
CHD1L-210ENST00000622533 PAXXQ9BUH6 204 aa10.49□□□□□ -0.73
CHD1L-210ENST00000622533 NDUFA4L2Q9NRX3 87 aa10.49□□□□□ -0.73
CHD1L-210ENST00000622533 PSMB11A5LHX3 300 aa10.49□□□□□ -0.73
CHD1L-210ENST00000622533 SRRM4A7MD48 611 aaKnown RBP10.49□□□□□ -0.73
CHD1L-210ENST00000622533 COX7A2P2O60397 106 aa10.49□□□□□ -0.73
CHD1L-210ENST00000622533 IGKV1-16P04430 117 aa10.49□□□□□ -0.73
CHD1L-210ENST00000622533 TNFAIP6P98066 277 aaPredicted RBP10.49□□□□□ -0.73
CHD1L-210ENST00000622533 SMAGPQ0VAQ4 97 aa10.49□□□□□ -0.73
CHD1L-210ENST00000622533 SPRNQ5BIV9 151 aa10.49□□□□□ -0.73
CHD1L-210ENST00000622533 LINC01545Q5VT33 79 aa10.49□□□□□ -0.73
CHD1L-210ENST00000622533 C16orf54Q6UWD8 224 aa10.49□□□□□ -0.73
CHD1L-210ENST00000622533 ZNF788Q6ZQV5 615 aa10.49□□□□□ -0.73
CHD1L-210ENST00000622533 ZNF833PQ6ZTB9 187 aa10.49□□□□□ -0.73
CHD1L-210ENST00000622533 VSTM2AQ8TAG5 236 aa10.49□□□□□ -0.73
CHD1L-210ENST00000622533 LINC00312Q9Y6C7 94 aa10.49□□□□□ -0.73
CHD1L-210ENST00000622533 H3BRM9 83 aa10.48□□□□□ -0.73
CHD1L-210ENST00000622533 CHEK1O14757 476 aa10.48□□□□□ -0.73
CHD1L-210ENST00000622533 ZNF207O43670 478 aaKnown RBP10.48□□□□□ -0.73
CHD1L-210ENST00000622533 NHLH1Q02575 133 aa10.48□□□□□ -0.73
CHD1L-210ENST00000622533 PRSS57Q6UWY2 283 aa10.48□□□□□ -0.73
CHD1L-210ENST00000622533 SVIPQ8NHG7 77 aa10.48□□□□□ -0.73
CHD1L-210ENST00000622533 NPFFR1Q9GZQ6 430 aa10.48□□□□□ -0.73
CHD1L-210ENST00000622533 THYN1Q9P016 225 aa10.48□□□□□ -0.73
CHD1L-210ENST00000622533 HSPB8Q9UJY1 196 aa10.48□□□□□ -0.73
CHD1L-210ENST00000622533 H3BTX0 84 aa10.48□□□□□ -0.73
CHD1L-210ENST00000622533 AZU1P20160 251 aa10.48□□□□□ -0.73
CHD1L-210ENST00000622533 TM4SF20Q53R12 229 aa10.48□□□□□ -0.73
CHD1L-210ENST00000622533 C10orf113Q5VZT2 155 aa10.48□□□□□ -0.73
CHD1L-210ENST00000622533 RPP21Q9H633 154 aaKnown RBP10.48□□□□□ -0.73
CHD1L-210ENST00000622533 JKAMPQ9P055 326 aa10.48□□□□□ -0.73
CHD1L-210ENST00000622533 SPCS1Q9Y6A9 102 aa10.48□□□□□ -0.73
CHD1L-210ENST00000622533 ZZEF1O43149 2961 aa10.48□□□□□ -0.73
CHD1L-210ENST00000622533 MOSP00540 346 aa10.47□□□□□ -0.73
CHD1L-210ENST00000622533 SLC25A5P05141 298 aaKnown RBP10.47□□□□□ -0.73
CHD1L-210ENST00000622533 PRB4P10163 310 aaPredicted RBP10.47□□□□□ -0.73
CHD1L-210ENST00000622533 FGF6P10767 208 aa10.47□□□□□ -0.73
CHD1L-210ENST00000622533 TMEM177Q53S58 311 aa10.47□□□□□ -0.73
CHD1L-210ENST00000622533 STXBP6Q8NFX7 210 aa10.47□□□□□ -0.73
CHD1L-210ENST00000622533 HARBI1Q96MB7 349 aa10.47□□□□□ -0.73
CHD1L-210ENST00000622533 NKX2-8O15522 239 aa10.47□□□□□ -0.73
CHD1L-210ENST00000622533 FAM201AQ5SY85 155 aa10.47□□□□□ -0.73
CHD1L-210ENST00000622533 A6NDN8 102 aa10.47□□□□□ -0.73
CHD1L-210ENST00000622533 FBLL1A6NHQ2 334 aaKnown RBP10.47□□□□□ -0.73
CHD1L-210ENST00000622533 TEX36Q5VZQ5 186 aa10.47□□□□□ -0.73
CHD1L-210ENST00000622533 OR8A1Q8NGG7 326 aa10.47□□□□□ -0.73
CHD1L-210ENST00000622533 CCL13Q99616 98 aa10.47□□□□□ -0.73
CHD1L-210ENST00000622533 TANC2Q9HCD6 1990 aa10.47□□□□□ -0.73
CHD1L-210ENST00000622533 DSCAML1Q8TD84 2053 aa10.46□□□□□ -0.73
CHD1L-210ENST00000622533 TEX48A0A1B0GUV7 120 aa10.46□□□□□ -0.73
CHD1L-210ENST00000622533 TCRBV4S1A1TA0A5B7 111 aa10.46□□□□□ -0.73
CHD1L-210ENST00000622533 P01737 135 aa10.46□□□□□ -0.73
CHD1L-210ENST00000622533 APOHP02749 345 aaPredicted RBP10.46□□□□□ -0.73
CHD1L-210ENST00000622533 FAM106CPP0CH98 169 aa10.46□□□□□ -0.73
CHD1L-210ENST00000622533 FAM106AQ4KMX7 169 aa10.46□□□□□ -0.73
CHD1L-210ENST00000622533 Q71RC1 249 aaPredicted RBP10.46□□□□□ -0.73
CHD1L-210ENST00000622533 NEU4Q8WWR8 484 aaPredicted RBP10.46□□□□□ -0.73
CHD1L-210ENST00000622533 FLYWCH2Q96CP2 140 aaKnown RBP10.46□□□□□ -0.73
CHD1L-210ENST00000622533 PCNX1Q96RV3 2341 aa10.46□□□□□ -0.74
CHD1L-210ENST00000622533 NAV3Q8IVL0 2385 aa10.46□□□□□ -0.74
CHD1L-210ENST00000622533 PPIAL4CA0A0B4J2A2 164 aa10.46□□□□□ -0.74
CHD1L-210ENST00000622533 IGHV1-46P01743 117 aa10.46□□□□□ -0.74
CHD1L-210ENST00000622533 PATE2Q6UY27 113 aa10.46□□□□□ -0.74
CHD1L-210ENST00000622533 OR5AN1Q8NGI8 311 aa10.46□□□□□ -0.74
CHD1L-210ENST00000622533 TMEM167AQ8TBQ9 72 aa10.46□□□□□ -0.74
CHD1L-210ENST00000622533 ZNF747Q9BV97 191 aa10.46□□□□□ -0.74
CHD1L-210ENST00000622533 PGPA6NDG6 321 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms