RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 SOX21Q9Y651 276 aaPredicted RBP6.44□□□□□ -1.38
VPS11-209ENST00000622309 COL8A2P25067 703 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 PHLDA1Q8WV24 401 aaPredicted RBP6.44□□□□□ -1.38
VPS11-209ENST00000622309 POLDIP2Q9Y2S7 368 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 IGHV5-51A0A0C4DH38 117 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 KIR2DS5A0A0G2JLQ3 304 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 A0A0G2JNG1 304 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 OOEPA6NGQ2 149 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 NPIPB6E9PJ23 425 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 KIR2DS3K7RE56 304 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 KIR2DS5Q14953 304 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 BAALCQ8WXS3 180 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 ZNF414Q96IQ9 312 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 SPANXA1Q9NS26 97 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 PRO0461Q9UI25 63 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 AMMECR1Q9Y4X0 333 aaPredicted RBP6.43□□□□□ -1.38
VPS11-209ENST00000622309 LSM4Q9Y4Z0 139 aaKnown RBP6.43□□□□□ -1.38
VPS11-209ENST00000622309 A0A087WX48 190 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 TRBV6-6A0A0A6YYG2 114 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 IGHV1OR15-9A0A0B4J2B8 117 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 NPIPB11E5RHQ5 1161 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 EFNA2O43921 213 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 NHLRC4P0CG21 123 aaPredicted RBP6.43□□□□□ -1.38
VPS11-209ENST00000622309 NDUFV3P56181 108 aaKnown RBP6.43□□□□□ -1.38
VPS11-209ENST00000622309 OR1C1Q15619 314 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 Q8TCH9 128 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 MAP1LC3AQ9H492 121 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 C17orf98A8MV24 154 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 SLC25A5P05141 298 aaKnown RBP6.43□□□□□ -1.38
VPS11-209ENST00000622309 P0C879 139 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 CRYGSP22914 178 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 GNG5P63218 68 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 CEND1Q8N111 149 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 OR5AN1Q8NGI8 311 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 NABP1Q96AH0 204 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 HIGD1BQ9P298 99 aa6.43□□□□□ -1.38
VPS11-209ENST00000622309 TMEM262E9PQX1 116 aa6.42□□□□□ -1.38
VPS11-209ENST00000622309 FNDC10F2Z333 226 aa6.42□□□□□ -1.38
VPS11-209ENST00000622309 K7EMI3 77 aa6.42□□□□□ -1.38
VPS11-209ENST00000622309 FCER1GP30273 86 aa6.42□□□□□ -1.38
VPS11-209ENST00000622309 RPL30P62888 115 aaKnown RBP6.42□□□□□ -1.38
VPS11-209ENST00000622309 PPDPFLQ8WWR9 84 aa6.42□□□□□ -1.38
VPS11-209ENST00000622309 LINC00477Q96M19 166 aa6.42□□□□□ -1.38
VPS11-209ENST00000622309 TMEM8BA6NDV4 472 aa6.42□□□□□ -1.38
VPS11-209ENST00000622309 IFITM1P13164 125 aa6.42□□□□□ -1.38
VPS11-209ENST00000622309 C12orf74Q32Q52 190 aa6.42□□□□□ -1.38
VPS11-209ENST00000622309 C10orf128Q5T292 105 aa6.42□□□□□ -1.38
VPS11-209ENST00000622309 ABHD12Q8N2K0 398 aa6.42□□□□□ -1.38
VPS11-209ENST00000622309 NABP2Q9BQ15 211 aa6.42□□□□□ -1.38
VPS11-209ENST00000622309 TMEM89A2RUT3 159 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 SNCGO76070 127 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 FHL3Q13643 280 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 RPRMLQ8N4K4 120 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 RPP21Q9H633 154 aaKnown RBP6.41□□□□□ -1.38
VPS11-209ENST00000622309 ZNF292O60281 2723 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 FAM90A9PA6NNJ1 464 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 SYNGR3O43761 229 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 FCN3O75636 299 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 LTAP01374 205 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 P01737 135 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 THBDP07204 575 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 PATE4P0C8F1 98 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 RPL35AP18077 110 aaKnown RBP6.41□□□□□ -1.38
VPS11-209ENST00000622309 UCNP55089 124 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 UBE2L3P68036 154 aaKnown RBP6.41□□□□□ -1.38
VPS11-209ENST00000622309 RRN3P1Q2M238 152 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 FAM27BQ5VT28 67 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 NFE4Q86UQ8 179 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 EPG5Q9HCE0 2579 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 TRAV24A0A0B4J272 114 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 RHODO00212 210 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 RPL7P18124 248 aaKnown RBP6.41□□□□□ -1.38
VPS11-209ENST00000622309 MEIG1Q5JSS6 88 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 FLYWCH2Q96CP2 140 aaKnown RBP6.41□□□□□ -1.38
VPS11-209ENST00000622309 NCOR2Q9Y618 2525 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 ZNF407Q9C0G0 2248 aa6.41□□□□□ -1.38
VPS11-209ENST00000622309 CENPVL3A0A0U1RRI6 287 aa6.4□□□□□ -1.38
VPS11-209ENST00000622309 PEX7O00628 323 aa6.4□□□□□ -1.38
VPS11-209ENST00000622309 ZNF32P17041 273 aa6.4□□□□□ -1.38
VPS11-209ENST00000622309 DIAPH2-AS1Q14236 149 aa6.4□□□□□ -1.38
VPS11-209ENST00000622309 LINC00596Q86U02 117 aa6.4□□□□□ -1.38
VPS11-209ENST00000622309 KIR2DL4Q99706 377 aa6.4□□□□□ -1.38
VPS11-209ENST00000622309 ZNF688P0C7X2 276 aa6.4□□□□□ -1.38
VPS11-209ENST00000622309 PSMG4Q5JS54 123 aa6.4□□□□□ -1.38
VPS11-209ENST00000622309 IL17RELQ6ZVW7 336 aa6.4□□□□□ -1.38
VPS11-209ENST00000622309 DLX4Q92988 240 aaPredicted RBP6.4□□□□□ -1.38
VPS11-209ENST00000622309 LOC389332A0A1B0GUA5 103 aa6.4□□□□□ -1.39
VPS11-209ENST00000622309 C8orf88P0DMB2 117 aa6.4□□□□□ -1.39
VPS11-209ENST00000622309 DSCR4P56555 118 aaPredicted RBP6.4□□□□□ -1.39
VPS11-209ENST00000622309 UTF1Q5T230 341 aa6.4□□□□□ -1.39
VPS11-209ENST00000622309 PEAR1Q5VY43 1037 aaPredicted RBP6.4□□□□□ -1.39
VPS11-209ENST00000622309 FAM159AQ6UWV7 190 aa6.4□□□□□ -1.39
VPS11-209ENST00000622309 Q6ZS92 163 aa6.4□□□□□ -1.39
VPS11-209ENST00000622309 ZNF503Q96F45 646 aa6.4□□□□□ -1.39
VPS11-209ENST00000622309 PLPPR2Q96GM1 343 aa6.4□□□□□ -1.39
VPS11-209ENST00000622309 FAM173AQ9BQD7 235 aa6.4□□□□□ -1.39
VPS11-209ENST00000622309 MRPS17Q9Y2R5 130 aaKnown RBP6.4□□□□□ -1.39
VPS11-209ENST00000622309 LRP4O75096 1905 aa6.4□□□□□ -1.39
VPS11-209ENST00000622309 EP300Q09472 2414 aaPredicted RBP6.39□□□□□ -1.39
VPS11-209ENST00000622309 MAP1BP46821 2468 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms