RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 XAGE1AQ9HD64 81 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 RPRMQ9NS64 109 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 MARCOQ9UEW3 520 aaPredicted RBP2.25□□□□□ -2.05
BRCA1-229ENST00000621897 V9GYS6 101 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 ECM29Q5VYK3 1845 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 MAST2Q6P0Q8 1798 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 QRICH2Q9H0J4 1663 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 TRPM1Q7Z4N2 1603 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 DSCAMO60469 2012 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 GPATCH8Q9UKJ3 1502 aaKnown RBP2.24□□□□□ -2.05
BRCA1-229ENST00000621897 IGHV3-21A0A0B4J1V1 117 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 IGKV1-9A0A0C4DH69 117 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 TRBV27A0A0K0K1C4 114 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 A8MWV9 139 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 C1orf196B1AJZ1 125 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 H3BMG7 143 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 NDUFB3O43676 98 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 SNAPC5O75971 98 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 NDUFB2O95178 105 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 TNFP01375 233 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 NPPCP23582 126 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 BRS3P32247 399 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 ZNF93P35789 620 aaPredicted RBP2.24□□□□□ -2.05
BRCA1-229ENST00000621897 CSN1S1P47710 185 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 DYNLT3P51808 116 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 CMC4P56277 68 aaPredicted RBP2.24□□□□□ -2.05
BRCA1-229ENST00000621897 TPPP2P59282 170 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 HBBP68871 147 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 DIAPH2-AS1Q14236 149 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 LUZP6Q538Z0 58 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 FAM78AQ5JUQ0 283 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 C22orf39Q6P5X5 142 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 AMTNQ6UX39 209 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 GKN2Q86XP6 184 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 AMN1Q8IY45 258 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 STAG3L4Q8TBR4 150 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 ITLN2Q8WWU7 325 aaPredicted RBP2.24□□□□□ -2.05
BRCA1-229ENST00000621897 NAA38Q9BRA0 125 aaKnown RBP2.24□□□□□ -2.05
BRCA1-229ENST00000621897 TSSK6Q9BXA6 273 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 BANF2Q9H503 90 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 DUSP21Q9H596 190 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 FAM60AQ9NP50 221 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 SLC39A9Q9NUM3 307 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 ZNF586Q9NXT0 402 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 TAS2R8Q9NYW2 309 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 MYH6P13533 1939 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 OBSL1O75147 1896 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 NSD3Q9BZ95 1437 aa2.24□□□□□ -2.05
BRCA1-229ENST00000621897 AHDC1Q5TGY3 1603 aaPredicted RBP2.24□□□□□ -2.05
BRCA1-229ENST00000621897 ANKRD36BQ8N2N9 1353 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 GLI3P10071 1580 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 NRKQ7Z2Y5 1582 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 MAP3K1Q13233 1512 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 NUP214P35658 2090 aaPredicted RBP2.23□□□□□ -2.05
BRCA1-229ENST00000621897 DOCK8Q8NF50 2099 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 A0A087X0T9 212 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 FAM236AA0A1B0GUQ0 79 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 FAM236BA0A1B0GV22 79 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 ODAMA1E959 279 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 C7orf71A4D174 169 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 FNDC10F2Z333 226 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 K7ERS5 55 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 HLA-DQA1P01909 254 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 IGHV3-30-3P0DP02 117 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 CRYBB3P26998 211 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 RNASE4P34096 147 aaKnown RBP2.23□□□□□ -2.05
BRCA1-229ENST00000621897 RPL27AP46776 148 aaKnown RBP2.23□□□□□ -2.05
BRCA1-229ENST00000621897 TMEM258P61165 79 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 EIF5AP63241 154 aaKnown RBP2.23□□□□□ -2.05
BRCA1-229ENST00000621897 MYL5Q02045 173 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 RPL18Q07020 188 aaKnown RBP2.23□□□□□ -2.05
BRCA1-229ENST00000621897 MRPL51Q4U2R6 128 aaKnown RBP2.23□□□□□ -2.05
BRCA1-229ENST00000621897 NTM-AS1Q6ZSK4 140 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 ZNF767PQ75MW2 155 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 PCP2Q8IVA1 136 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 TEX29Q8N6K0 151 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 ZFAND2AQ8N6M9 145 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 CYB561D1Q8N8Q1 229 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 PLPP5Q8NEB5 264 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 OR8D4Q8NGM9 314 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 MIEN1Q9BRT3 115 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 PLA2G12AQ9BZM1 189 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 C21orf62Q9NYP8 219 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 PHLDA3Q9Y5J5 127 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 SIPA1L1O43166 1804 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 GPR179Q6PRD1 2367 aa2.23□□□□□ -2.05
BRCA1-229ENST00000621897 N4BP2Q86UW6 1770 aaPredicted RBP2.23□□□□□ -2.05
BRCA1-229ENST00000621897 BAZ1BQ9UIG0 1483 aaKnown RBP2.22□□□□□ -2.05
BRCA1-229ENST00000621897 A0A0G2JMM0 328 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 A0A1W2PPB8 328 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 KIR3DP1A8MWS1 328 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 LEUTXA8MZ59 168 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 CCDC179H3BU77 68 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 HIST1H2BKO60814 126 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 HIST1H2BJP06899 126 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 CXCL1P09341 107 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 OR5AC1P0C628 307 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 TLX1NBP0CAT3 122 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 CGB3P0DN86 165 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 CGB7P0DN87 165 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms