RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 SIPA1L1O43166 1804 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 K7EP34 96 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 MORN5Q5VZ52 161 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 PIKFYVEQ9Y2I7 2098 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 A0A1B0GW64 132 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 RBM3P98179 157 aaKnown RBP8.18□□□□□ -1.1
COL4A6-210ENST00000621266 SLC25A48Q6ZT89 311 aaKnown RBP8.18□□□□□ -1.1
COL4A6-210ENST00000621266 GAGE12JA6NER3 117 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 GAGE4Q13068 117 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 GAGE5Q13069 117 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 GAGE6Q13070 117 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 Q71RC1 249 aaPredicted RBP8.18□□□□□ -1.1
COL4A6-210ENST00000621266 SPXQ9BT56 116 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 ARID2Q68CP9 1835 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 WNT2P09544 360 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 IGFBP3P17936 291 aaPredicted RBP8.18□□□□□ -1.1
COL4A6-210ENST00000621266 FAM57AQ8TBR7 257 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 OVOL2Q9BRP0 275 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 THADAQ6YHU6 1953 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 TRAV12-1A0A0B4J245 112 aa8.17□□□□□ -1.1
COL4A6-210ENST00000621266 TRGV4A0A0C4DH28 118 aa8.17□□□□□ -1.1
COL4A6-210ENST00000621266 SOCS3O14543 225 aa8.17□□□□□ -1.1
COL4A6-210ENST00000621266 TEX43Q6ZNM6 134 aa8.17□□□□□ -1.1
COL4A6-210ENST00000621266 MRPL27Q9P0M9 148 aaKnown RBP8.17□□□□□ -1.1
COL4A6-210ENST00000621266 SNRNP200O75643 2136 aaKnown RBP8.17□□□□□ -1.1
COL4A6-210ENST00000621266 F8W1H4 67 aa8.17□□□□□ -1.1
COL4A6-210ENST00000621266 RBMY1FQ15415 496 aaKnown RBP8.17□□□□□ -1.1
COL4A6-210ENST00000621266 ZNF876PQ49A33 203 aa8.17□□□□□ -1.1
COL4A6-210ENST00000621266 A0A0A6YYD4 124 aa8.17□□□□□ -1.1
COL4A6-210ENST00000621266 CRIPAKQ8N1N5 446 aa8.17□□□□□ -1.1
COL4A6-210ENST00000621266 SLC50A1Q9BRV3 221 aa8.17□□□□□ -1.1
COL4A6-210ENST00000621266 COL4A6Q14031 1691 aa8.17□□□□□ -1.1
COL4A6-210ENST00000621266 TMEM167AQ8TBQ9 72 aa8.17□□□□□ -1.1
COL4A6-210ENST00000621266 TRBV6-7A0A0A0MS04 114 aa8.17□□□□□ -1.1
COL4A6-210ENST00000621266 RHOGP84095 191 aa8.17□□□□□ -1.1
COL4A6-210ENST00000621266 NSUN5P1Q3KNT7 163 aa8.17□□□□□ -1.1
COL4A6-210ENST00000621266 LINC01559Q495D7 138 aa8.17□□□□□ -1.1
COL4A6-210ENST00000621266 SVILO95425 2214 aa8.17□□□□□ -1.1
COL4A6-210ENST00000621266 IFNL4K9M1U5 179 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 ID3Q02535 119 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 C20orf144Q9BQM9 153 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 CSTL1Q9H114 145 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 ANAPC10Q9UM13 185 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 IGKV1D-8A0A087WSZ0 117 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 GAGE7O76087 117 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 GAGE12FP0CL80 117 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 GAGE12GP0CL81 117 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 GAGE12IP0CL82 117 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 TREML4Q6UXN2 200 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 STHQ8IWL8 128 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 SPTBP11277 2137 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 SLAQ13239 276 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 RASL10AQ92737 203 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 AGMATQ9BSE5 352 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 C1QTNF5Q9BXJ0 243 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 C8orf46Q8TAG6 207 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 C1QTNF4Q9BXJ3 329 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 ASXL3Q9C0F0 2248 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 SH2D1AO60880 128 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 FCN3O75636 299 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 CD24P25063 80 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 MST1P26927 711 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 HAMPP81172 84 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 BSPH1Q075Z2 132 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 PVRIGQ6DKI7 326 aa8.16□□□□□ -1.1
COL4A6-210ENST00000621266 TIMM21Q9BVV7 248 aa8.15□□□□□ -1.1
COL4A6-210ENST00000621266 K7ERJ3 54 aa8.15□□□□□ -1.1
COL4A6-210ENST00000621266 TET1Q8NFU7 2136 aa8.15□□□□□ -1.1
COL4A6-210ENST00000621266 PMS2P5A8MQ11 134 aa8.15□□□□□ -1.1
COL4A6-210ENST00000621266 AMN1Q8IY45 258 aa8.15□□□□□ -1.1
COL4A6-210ENST00000621266 DPM3Q9P2X0 92 aa8.15□□□□□ -1.1
COL4A6-210ENST00000621266 WDR83OSQ9Y284 106 aa8.15□□□□□ -1.1
COL4A6-210ENST00000621266 RP1P56715 2156 aa8.15□□□□□ -1.1
COL4A6-210ENST00000621266 HEATR5BQ9P2D3 2071 aa8.15□□□□□ -1.11
COL4A6-210ENST00000621266 LINC01549A6NIU2 74 aa8.15□□□□□ -1.11
COL4A6-210ENST00000621266 F8WEM9 126 aa8.15□□□□□ -1.11
COL4A6-210ENST00000621266 H3BMG7 143 aa8.15□□□□□ -1.11
COL4A6-210ENST00000621266 TM4SF5O14894 197 aa8.15□□□□□ -1.11
COL4A6-210ENST00000621266 RFPL3SP0C7P2 107 aa8.15□□□□□ -1.11
COL4A6-210ENST00000621266 TMEM258P61165 79 aa8.15□□□□□ -1.11
COL4A6-210ENST00000621266 TCTEX1D4Q5JR98 221 aa8.15□□□□□ -1.11
COL4A6-210ENST00000621266 GFI1Q99684 422 aa8.15□□□□□ -1.11
COL4A6-210ENST00000621266 A0A1W2PPM0 123 aa8.14□□□□□ -1.11
COL4A6-210ENST00000621266 EFEMP2O95967 443 aa8.14□□□□□ -1.11
COL4A6-210ENST00000621266 RPL15P61313 204 aaKnown RBP8.14□□□□□ -1.11
COL4A6-210ENST00000621266 RPP25LQ8N5L8 163 aaKnown RBP8.14□□□□□ -1.11
COL4A6-210ENST00000621266 C11orf44Q8N8P7 122 aa8.14□□□□□ -1.11
COL4A6-210ENST00000621266 MYMXA0A1B0GTQ4 84 aa8.14□□□□□ -1.11
COL4A6-210ENST00000621266 LILRA1O75019 489 aa8.14□□□□□ -1.11
COL4A6-210ENST00000621266 PRB2P02812 416 aaPredicted RBP8.14□□□□□ -1.11
COL4A6-210ENST00000621266 CCL3L1P16619 93 aa8.14□□□□□ -1.11
COL4A6-210ENST00000621266 LOC102723996A0A087X1L8 192 aa8.14□□□□□ -1.11
COL4A6-210ENST00000621266 CHCHD2Q9Y6H1 151 aaPredicted RBP8.14□□□□□ -1.11
COL4A6-210ENST00000621266 TRGV11A0A075B6L2 103 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 A0A1B0GWJ7 208 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 C3orf36Q3SXR2 165 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 VGLL1Q99990 258 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 TRAV1-1A0A0B4J248 108 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 IGLC2P0DOY2 106 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 IGLC3P0DOY3 106 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms