RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 YPEL4Q96NS1 127 aa7.42□□□□□ -1.22
RBFOX1-223ENST00000620507 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.42□□□□□ -1.22
RBFOX1-223ENST00000620507 A0A1B0GUS0 222 aa7.42□□□□□ -1.22
RBFOX1-223ENST00000620507 HBBP68871 147 aa7.42□□□□□ -1.22
RBFOX1-223ENST00000620507 UNQ5815/PRO19632Q6UWF5 114 aa7.42□□□□□ -1.22
RBFOX1-223ENST00000620507 RNF5Q99942 180 aa7.42□□□□□ -1.22
RBFOX1-223ENST00000620507 RPP21Q9H633 154 aaKnown RBP7.42□□□□□ -1.22
RBFOX1-223ENST00000620507 IGKV1OR2-108A0A075B7D4 117 aa7.42□□□□□ -1.22
RBFOX1-223ENST00000620507 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.42□□□□□ -1.22
RBFOX1-223ENST00000620507 OR2J3O76001 311 aa7.42□□□□□ -1.22
RBFOX1-223ENST00000620507 GOSR1O95249 250 aa7.42□□□□□ -1.22
RBFOX1-223ENST00000620507 FOXA3P55318 350 aaPredicted RBP7.42□□□□□ -1.22
RBFOX1-223ENST00000620507 COL5A1-AS1Q5SY13 56 aa7.42□□□□□ -1.22
RBFOX1-223ENST00000620507 TPTE2P1Q5T6R2 138 aa7.42□□□□□ -1.22
RBFOX1-223ENST00000620507 ST6GALNAC3Q8NDV1 305 aa7.42□□□□□ -1.22
RBFOX1-223ENST00000620507 ARPC1AQ92747 370 aa7.42□□□□□ -1.22
RBFOX1-223ENST00000620507 CFAP54Q96N23 3096 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 LINC00614P0C842 121 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 PF4V1P10720 104 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 KLRD1Q13241 179 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 GTF2H5Q6ZYL4 71 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 BEND2Q8NDZ0 799 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 NEU1Q99519 415 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 LINC00574Q9H8X3 128 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 C21orf62Q9NYP8 219 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 IGHV3-23P01764 117 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 RPL7P18124 248 aaKnown RBP7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 Q6ZN92 141 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 TCF24Q7RTU0 167 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 FAM19A2Q8N3H0 131 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 C8orf31Q8N9H6 132 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 RNF125Q96EQ8 232 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 SLC25A2Q9BXI2 301 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 HIF1ANQ9NWT6 349 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 CLEC5AQ9NY25 188 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 PRSS46E5RG02 174 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 K7EN84 100 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 CD33P20138 364 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 KLF17Q5JT82 389 aaPredicted RBP7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 C19orf35Q6ZS72 473 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 SSBP4Q9BWG4 385 aaPredicted RBP7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 OTORQ9NRC9 128 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 DSCAMO60469 2012 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 ATRXP46100 2492 aa7.41□□□□□ -1.22
RBFOX1-223ENST00000620507 SPG11Q96JI7 2443 aa7.4□□□□□ -1.22
RBFOX1-223ENST00000620507 GRNP28799 593 aaKnown RBP7.4□□□□□ -1.22
RBFOX1-223ENST00000620507 YPEL3P61236 119 aaPredicted RBP7.4□□□□□ -1.22
RBFOX1-223ENST00000620507 SSBP2P81877 361 aaPredicted RBP7.4□□□□□ -1.22
RBFOX1-223ENST00000620507 LY6DQ14210 128 aa7.4□□□□□ -1.22
RBFOX1-223ENST00000620507 ZNF329Q86UD4 541 aa7.4□□□□□ -1.22
RBFOX1-223ENST00000620507 OR4B1Q8NGF8 309 aa7.4□□□□□ -1.22
RBFOX1-223ENST00000620507 TSKUQ8WUA8 353 aa7.4□□□□□ -1.22
RBFOX1-223ENST00000620507 V9GYV3 84 aa7.4□□□□□ -1.22
RBFOX1-223ENST00000620507 BMPR1BO00238 502 aa7.4□□□□□ -1.22
RBFOX1-223ENST00000620507 ORM1P02763 201 aa7.4□□□□□ -1.22
RBFOX1-223ENST00000620507 PVRIGQ6DKI7 326 aa7.4□□□□□ -1.22
RBFOX1-223ENST00000620507 CDPF1Q6NVV7 123 aa7.4□□□□□ -1.22
RBFOX1-223ENST00000620507 ALKBH7Q9BT30 221 aaPredicted RBP7.4□□□□□ -1.22
RBFOX1-223ENST00000620507 SLC25A39Q9BZJ4 359 aaPredicted RBP7.4□□□□□ -1.22
RBFOX1-223ENST00000620507 NRN1Q9NPD7 142 aa7.4□□□□□ -1.22
RBFOX1-223ENST00000620507 IFITM10A6NMD0 228 aa7.4□□□□□ -1.23
RBFOX1-223ENST00000620507 E7EUB6 86 aa7.4□□□□□ -1.23
RBFOX1-223ENST00000620507 HLA-DRB1P01911 266 aa7.4□□□□□ -1.23
RBFOX1-223ENST00000620507 DNLZQ5SXM8 178 aa7.4□□□□□ -1.23
RBFOX1-223ENST00000620507 KCNS1Q96KK3 526 aa7.4□□□□□ -1.23
RBFOX1-223ENST00000620507 RABAC1Q9UI14 185 aa7.4□□□□□ -1.23
RBFOX1-223ENST00000620507 ANKRD11Q6UB99 2663 aaPredicted RBP7.4□□□□□ -1.23
RBFOX1-223ENST00000620507 EREGO14944 169 aa7.39□□□□□ -1.23
RBFOX1-223ENST00000620507 TCRAP04437 139 aa7.39□□□□□ -1.23
RBFOX1-223ENST00000620507 EXOC3-AS1Q8N2X6 119 aa7.39□□□□□ -1.23
RBFOX1-223ENST00000620507 ZNF664Q8N3J9 261 aa7.39□□□□□ -1.23
RBFOX1-223ENST00000620507 FBXL7Q9UJT9 491 aa7.39□□□□□ -1.23
RBFOX1-223ENST00000620507 IGHV3OR16-8A0A075B7F1 116 aa7.39□□□□□ -1.23
RBFOX1-223ENST00000620507 IGLC7A0M8Q6 106 aa7.39□□□□□ -1.23
RBFOX1-223ENST00000620507 J3KRW8 73 aa7.39□□□□□ -1.23
RBFOX1-223ENST00000620507 OR10J3Q5JRS4 329 aa7.39□□□□□ -1.23
RBFOX1-223ENST00000620507 RBPMS2Q6ZRY4 209 aaKnown RBP7.39□□□□□ -1.23
RBFOX1-223ENST00000620507 TMEM189A5PLL7 270 aa7.39□□□□□ -1.23
RBFOX1-223ENST00000620507 SPATA45Q537H7 98 aa7.39□□□□□ -1.23
RBFOX1-223ENST00000620507 COA6Q5JTJ3 125 aaKnown RBP7.39□□□□□ -1.23
RBFOX1-223ENST00000620507 RITA1Q96K30 269 aa7.39□□□□□ -1.23
RBFOX1-223ENST00000620507 CHTOPQ9Y3Y2 248 aaKnown RBP7.39□□□□□ -1.23
RBFOX1-223ENST00000620507 A0A1B0GV72 72 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 RPL15P61313 204 aaKnown RBP7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 PSG9Q00887 426 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 C5orf64Q2M2E5 130 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 MORN5Q5VZ52 161 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 KIR3DL3Q8N743 410 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 NUP35Q8NFH5 326 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 FRYLO94915 3013 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 MYO15AQ9UKN7 3530 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 TRAV8-1A0A0A6YYK1 113 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 OR2T8A6NH00 312 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 ZNF324O75467 553 aaPredicted RBP7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 PRB4P10163 310 aaPredicted RBP7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 PRTN3P24158 256 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 TFPI2P48307 235 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 RIPPLY3P57055 190 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 ATOH7Q8N100 152 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 THAP8Q8NA92 274 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms