RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 LINC01545Q5VT33 79 aa11.77□□□□□ -0.52
SYNRG-225ENST00000619541 SRSF12Q8WXF0 261 aaKnown RBP11.77□□□□□ -0.52
SYNRG-225ENST00000619541 FOXA2Q9Y261 457 aaPredicted RBP11.77□□□□□ -0.52
SYNRG-225ENST00000619541 ADAMTSL5Q6ZMM2 481 aa11.77□□□□□ -0.53
SYNRG-225ENST00000619541 C11orf53Q8IXP5 236 aa11.77□□□□□ -0.53
SYNRG-225ENST00000619541 BOD1L1Q8NFC6 3051 aa11.77□□□□□ -0.53
SYNRG-225ENST00000619541 ZNF747Q9BV97 191 aa11.77□□□□□ -0.53
SYNRG-225ENST00000619541 JPT1Q9UK76 154 aa11.77□□□□□ -0.53
SYNRG-225ENST00000619541 TANC2Q9HCD6 1990 aa11.77□□□□□ -0.53
SYNRG-225ENST00000619541 OR5A1Q8NGJ0 315 aa11.77□□□□□ -0.53
SYNRG-225ENST00000619541 MRPL32Q9BYC8 188 aaKnown RBP11.77□□□□□ -0.53
SYNRG-225ENST00000619541 CALYQ9NYX4 217 aa11.77□□□□□ -0.53
SYNRG-225ENST00000619541 F2RL2O00254 374 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 HOXC12P31275 282 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 ERHP84090 104 aaKnown RBP11.76□□□□□ -0.53
SYNRG-225ENST00000619541 CD69Q07108 199 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 CT45A1Q5HYN5 189 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 CNEP1R1Q8N9A8 125 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 CT45A3Q8NHU0 189 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 PPP1R35Q8TAP8 253 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 NEU4Q8WWR8 484 aaPredicted RBP11.76□□□□□ -0.53
SYNRG-225ENST00000619541 C18orf15Q96N68 181 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 C19orf24Q9BVV8 132 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 TTTY12Q9BZ98 90 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 ZNF292O60281 2723 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 FAM87AP0C7U9 286 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 SMIM13P0DJ93 91 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 IFI27P40305 119 aaPredicted RBP11.76□□□□□ -0.53
SYNRG-225ENST00000619541 KIR2DS2P43631 304 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 RAB9AP51151 201 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 NEGR1Q7Z3B1 354 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 ZADH2Q8N4Q0 377 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 TTTY13Q9BZ97 58 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 C1RLQ9NZP8 487 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 FCER1GP30273 86 aa11.76□□□□□ -0.53
SYNRG-225ENST00000619541 FCGR2BP31994 310 aaPredicted RBP11.76□□□□□ -0.53
SYNRG-225ENST00000619541 C10orf55Q5SWW7 151 aa11.75□□□□□ -0.53
SYNRG-225ENST00000619541 OR1L4Q8NGR5 311 aa11.75□□□□□ -0.53
SYNRG-225ENST00000619541 DSPP15924 2871 aaKnown RBP11.75□□□□□ -0.53
SYNRG-225ENST00000619541 MGST3O14880 152 aa11.75□□□□□ -0.53
SYNRG-225ENST00000619541 CKS1BP61024 79 aa11.75□□□□□ -0.53
SYNRG-225ENST00000619541 LOXL1Q08397 574 aaPredicted RBP11.75□□□□□ -0.53
SYNRG-225ENST00000619541 SPTBN2O15020 2390 aa11.75□□□□□ -0.53
SYNRG-225ENST00000619541 SMAD7O15105 426 aaKnown RBP11.75□□□□□ -0.53
SYNRG-225ENST00000619541 ARMS2P0C7Q2 107 aa11.75□□□□□ -0.53
SYNRG-225ENST00000619541 PRCDQ00LT1 54 aa11.75□□□□□ -0.53
SYNRG-225ENST00000619541 SCGB2A2Q13296 93 aa11.75□□□□□ -0.53
SYNRG-225ENST00000619541 RNFT1Q5M7Z0 435 aa11.75□□□□□ -0.53
SYNRG-225ENST00000619541 SSUH2Q9Y2M2 353 aa11.75□□□□□ -0.53
SYNRG-225ENST00000619541 SRRM4A7MD48 611 aaKnown RBP11.74□□□□□ -0.53
SYNRG-225ENST00000619541 CEACAM3P40198 252 aa11.74□□□□□ -0.53
SYNRG-225ENST00000619541 ATP6V0BQ99437 205 aa11.74□□□□□ -0.53
SYNRG-225ENST00000619541 GAGE12HA6NDE8 117 aa11.74□□□□□ -0.53
SYNRG-225ENST00000619541 IQCF6A8MYZ5 107 aa11.74□□□□□ -0.53
SYNRG-225ENST00000619541 PATE2Q6UY27 113 aa11.74□□□□□ -0.53
SYNRG-225ENST00000619541 PIP4P1Q86T03 277 aa11.74□□□□□ -0.53
SYNRG-225ENST00000619541 BCL6BQ8N143 479 aaPredicted RBP11.74□□□□□ -0.53
SYNRG-225ENST00000619541 NHP2Q9NX24 153 aaKnown RBP11.74□□□□□ -0.53
SYNRG-225ENST00000619541 J3QR89 54 aa11.74□□□□□ -0.53
SYNRG-225ENST00000619541 RNASE2P10153 161 aaKnown RBP11.74□□□□□ -0.53
SYNRG-225ENST00000619541 CFHR2P36980 270 aa11.74□□□□□ -0.53
SYNRG-225ENST00000619541 GOLT1AQ6ZVE7 132 aa11.74□□□□□ -0.53
SYNRG-225ENST00000619541 SH2D6Q7Z4S9 175 aa11.74□□□□□ -0.53
SYNRG-225ENST00000619541 FXYD5Q96DB9 178 aa11.74□□□□□ -0.53
SYNRG-225ENST00000619541 A0A1W2PRD5 423 aa11.73□□□□□ -0.53
SYNRG-225ENST00000619541 A0A1W2PRF3 423 aa11.73□□□□□ -0.53
SYNRG-225ENST00000619541 A0A1W2PRM7 423 aa11.73□□□□□ -0.53
SYNRG-225ENST00000619541 FTH1P19P0C7X4 201 aa11.73□□□□□ -0.53
SYNRG-225ENST00000619541 ETDBQ3ZM63 59 aa11.73□□□□□ -0.53
SYNRG-225ENST00000619541 Q71RC1 249 aaPredicted RBP11.73□□□□□ -0.53
SYNRG-225ENST00000619541 NDFIP1Q9BT67 221 aa11.73□□□□□ -0.53
SYNRG-225ENST00000619541 SPENQ96T58 3664 aaKnown RBP11.73□□□□□ -0.53
SYNRG-225ENST00000619541 PSMB11A5LHX3 300 aa11.73□□□□□ -0.53
SYNRG-225ENST00000619541 UPK2O00526 184 aa11.73□□□□□ -0.53
SYNRG-225ENST00000619541 MEOX1P50221 254 aa11.73□□□□□ -0.53
SYNRG-225ENST00000619541 NKX2-8O15522 239 aa11.73□□□□□ -0.53
SYNRG-225ENST00000619541 SAA1P0DJI8 122 aaPredicted RBP11.73□□□□□ -0.53
SYNRG-225ENST00000619541 WFDC2Q14508 124 aa11.73□□□□□ -0.53
SYNRG-225ENST00000619541 HCP5Q6MZN7 132 aa11.73□□□□□ -0.53
SYNRG-225ENST00000619541 INO80CQ6PI98 192 aaPredicted RBP11.73□□□□□ -0.53
SYNRG-225ENST00000619541 ZNF414Q96IQ9 312 aa11.73□□□□□ -0.53
SYNRG-225ENST00000619541 A0A1B0GUT8 65 aa11.72□□□□□ -0.53
SYNRG-225ENST00000619541 NDUFS8O00217 210 aa11.72□□□□□ -0.53
SYNRG-225ENST00000619541 SVIPQ8NHG7 77 aa11.72□□□□□ -0.53
SYNRG-225ENST00000619541 HARBI1Q96MB7 349 aa11.72□□□□□ -0.53
SYNRG-225ENST00000619541 COL25A1Q9BXS0 654 aaPredicted RBP11.72□□□□□ -0.53
SYNRG-225ENST00000619541 IGKV1D-17A0A075B6S4 117 aa11.72□□□□□ -0.53
SYNRG-225ENST00000619541 FNDC10F2Z333 226 aa11.72□□□□□ -0.53
SYNRG-225ENST00000619541 LOXL3P58215 753 aa11.72□□□□□ -0.53
SYNRG-225ENST00000619541 ITLN1Q8WWA0 313 aa11.72□□□□□ -0.53
SYNRG-225ENST00000619541 TRAV26-1A0A087WT03 109 aa11.72□□□□□ -0.53
SYNRG-225ENST00000619541 DLL1O00548 723 aa11.72□□□□□ -0.53
SYNRG-225ENST00000619541 WISP2O76076 250 aa11.72□□□□□ -0.53
SYNRG-225ENST00000619541 FER1L6-AS2Q96M78 137 aa11.72□□□□□ -0.53
SYNRG-225ENST00000619541 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.71□□□□□ -0.53
SYNRG-225ENST00000619541 K7EQM0 130 aa11.71□□□□□ -0.53
SYNRG-225ENST00000619541 PTPRZ1P23471 2315 aaPredicted RBP11.71□□□□□ -0.53
SYNRG-225ENST00000619541 MOGAT3Q86VF5 341 aa11.71□□□□□ -0.53
SYNRG-225ENST00000619541 CEP250Q9BV73 2442 aa11.71□□□□□ -0.53
SYNRG-225ENST00000619541 RIGQ13278 110 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms