RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 PYGO2Q9BRQ0 406 aa9.85□□□□□ -0.83
CIITA-212ENST00000618207 MRPL32Q9BYC8 188 aaKnown RBP9.85□□□□□ -0.83
CIITA-212ENST00000618207 DOPEY1Q5JWR5 2465 aa9.84□□□□□ -0.83
CIITA-212ENST00000618207 XKRY2A2RUG3 117 aa9.84□□□□□ -0.83
CIITA-212ENST00000618207 SH2D7A6NKC9 451 aaPredicted RBP9.84□□□□□ -0.83
CIITA-212ENST00000618207 PHOX2AO14813 284 aa9.84□□□□□ -0.83
CIITA-212ENST00000618207 GGCTO75223 188 aaKnown RBP9.84□□□□□ -0.83
CIITA-212ENST00000618207 FSTL3O95633 263 aa9.84□□□□□ -0.83
CIITA-212ENST00000618207 PPBPP02775 128 aa9.84□□□□□ -0.83
CIITA-212ENST00000618207 SRP14P37108 136 aaKnown RBP9.84□□□□□ -0.83
CIITA-212ENST00000618207 TRAPPC1Q9Y5R8 145 aa9.84□□□□□ -0.83
CIITA-212ENST00000618207 EPG5Q9HCE0 2579 aa9.84□□□□□ -0.83
CIITA-212ENST00000618207 M0R1W7 72 aa9.84□□□□□ -0.83
CIITA-212ENST00000618207 HYPMO75409 117 aa9.84□□□□□ -0.83
CIITA-212ENST00000618207 CRYGCP07315 174 aa9.84□□□□□ -0.83
CIITA-212ENST00000618207 HOXB4P17483 251 aaPredicted RBP9.84□□□□□ -0.83
CIITA-212ENST00000618207 HIST3H2BBQ8N257 126 aa9.84□□□□□ -0.83
CIITA-212ENST00000618207 TMEM116Q8NCL8 245 aa9.84□□□□□ -0.83
CIITA-212ENST00000618207 C11orf52Q96A22 123 aa9.84□□□□□ -0.83
CIITA-212ENST00000618207 RASL11BQ9BPW5 248 aa9.84□□□□□ -0.83
CIITA-212ENST00000618207 USP24Q9UPU5 2620 aa9.84□□□□□ -0.83
CIITA-212ENST00000618207 IGHV3-35A0A0C4DH35 117 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 PGPA6NDG6 321 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 CBLN1P23435 193 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 EFNA4P52798 201 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 NDPQ00604 133 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 OR8I2Q8N0Y5 310 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 ZNF664Q8N3J9 261 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 FXYD5Q96DB9 178 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 IGHV3OR16-8A0A075B7F1 116 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 A0A1W2PRE2 83 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 CBY3A6NI87 242 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 A6NNC1 897 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 SLC25A5P05141 298 aaKnown RBP9.83□□□□□ -0.84
CIITA-212ENST00000618207 CX3CL1P78423 397 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 PRR31Q5SQ13 230 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 FAM120AOSQ5T036 256 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 PERPQ96FX8 193 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 ODF3BA8MYP8 253 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 TGOLN2O43493 480 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 PRB1P04280 392 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 S100A7P31151 101 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 C5orf64Q2M2E5 130 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 Q5PR19 223 aa9.83□□□□□ -0.84
CIITA-212ENST00000618207 GRIFINA4D1Z8 144 aa9.82□□□□□ -0.84
CIITA-212ENST00000618207 K7EP13 123 aa9.82□□□□□ -0.84
CIITA-212ENST00000618207 ISLRO14498 428 aa9.82□□□□□ -0.84
CIITA-212ENST00000618207 NBEAP1P0C6P0 100 aa9.82□□□□□ -0.84
CIITA-212ENST00000618207 IGLC1P0CG04 106 aa9.82□□□□□ -0.84
CIITA-212ENST00000618207 RNF2Q99496 336 aa9.82□□□□□ -0.84
CIITA-212ENST00000618207 TRGV9Q99603 122 aa9.82□□□□□ -0.84
CIITA-212ENST00000618207 ASCL2Q99929 193 aa9.82□□□□□ -0.84
CIITA-212ENST00000618207 CSTL1Q9H114 145 aa9.82□□□□□ -0.84
CIITA-212ENST00000618207 ELOA3CA0A087WX78 387 aaPredicted RBP9.82□□□□□ -0.84
CIITA-212ENST00000618207 I3L2K1 104 aa9.82□□□□□ -0.84
CIITA-212ENST00000618207 CD99P14209 185 aa9.82□□□□□ -0.84
CIITA-212ENST00000618207 BCL6BQ8N143 479 aaPredicted RBP9.82□□□□□ -0.84
CIITA-212ENST00000618207 C9JCJ5 164 aa9.81□□□□□ -0.84
CIITA-212ENST00000618207 K7EIM0 57 aa9.81□□□□□ -0.84
CIITA-212ENST00000618207 CORTO00230 105 aa9.81□□□□□ -0.84
CIITA-212ENST00000618207 IER3P46695 156 aa9.81□□□□□ -0.84
CIITA-212ENST00000618207 ZNF329Q86UD4 541 aa9.81□□□□□ -0.84
CIITA-212ENST00000618207 IGKV1-17P01599 117 aa9.81□□□□□ -0.84
CIITA-212ENST00000618207 CNN1P51911 297 aaKnown RBP9.81□□□□□ -0.84
CIITA-212ENST00000618207 RNF151Q2KHN1 245 aa9.81□□□□□ -0.84
CIITA-212ENST00000618207 ACTL10Q5JWF8 245 aa9.81□□□□□ -0.84
CIITA-212ENST00000618207 IBA57Q5T440 356 aaKnown RBP9.81□□□□□ -0.84
CIITA-212ENST00000618207 FAM168AQ92567 244 aa9.81□□□□□ -0.84
CIITA-212ENST00000618207 V9GYV3 84 aa9.81□□□□□ -0.84
CIITA-212ENST00000618207 PEX7O00628 323 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 OR2J3O76001 311 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 IGLV2-8P01709 118 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 IGHV4-39P01824 125 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 SAA4P35542 130 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 FOXL1Q12952 345 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 RPEL1Q2QD12 228 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 MRPL54Q6P161 138 aaKnown RBP9.8□□□□□ -0.84
CIITA-212ENST00000618207 BAGE2Q86Y30 109 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 NRGNQ92686 78 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 IL36BQ9NZH7 164 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 PITPNC1Q9UKF7 332 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 HIGD1AQ9Y241 93 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 ZNF705GA8MUZ8 300 aaPredicted RBP9.8□□□□□ -0.84
CIITA-212ENST00000618207 J3KRW8 73 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 IL4P05112 153 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 LMO4P61968 165 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 EXOC3-AS1Q8N2X6 119 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 ARPC1AQ92747 370 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 PACRGQ96M98 296 aaPredicted RBP9.8□□□□□ -0.84
CIITA-212ENST00000618207 C17orf77Q96MU5 243 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 TBX15Q96SF7 602 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 HIST1H2BLQ99880 126 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 RNF5Q99942 180 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 SIRPDQ9H106 197 aa9.8□□□□□ -0.84
CIITA-212ENST00000618207 TRAV8-1A0A0A6YYK1 113 aa9.79□□□□□ -0.84
CIITA-212ENST00000618207 IGHV2-70DA0A0C4DH43 119 aa9.79□□□□□ -0.84
CIITA-212ENST00000618207 SERTM2A0A1B0GWG4 89 aa9.79□□□□□ -0.84
CIITA-212ENST00000618207 GNG7O60262 68 aa9.79□□□□□ -0.84
CIITA-212ENST00000618207 ADMP35318 185 aa9.79□□□□□ -0.84
CIITA-212ENST00000618207 UBE2G1P62253 170 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms