RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 PFDN2Q9UHV9 154 aa18.39■□□□□ 0.54
PMS1-220ENST00000618056 CSMD3Q7Z407 3707 aa18.39■□□□□ 0.53
PMS1-220ENST00000618056 TMEM144Q7Z5S9 345 aa18.39■□□□□ 0.53
PMS1-220ENST00000618056 FAM25EA8MYX2 175 aa18.38■□□□□ 0.53
PMS1-220ENST00000618056 AKR1C1Q04828 323 aa18.38■□□□□ 0.53
PMS1-220ENST00000618056 OR2F1Q13607 317 aa18.38■□□□□ 0.53
PMS1-220ENST00000618056 Q6ZWC4 215 aa18.38■□□□□ 0.53
PMS1-220ENST00000618056 C5orf51A6NDU8 294 aa18.37■□□□□ 0.53
PMS1-220ENST00000618056 DEFB131AP59861 70 aa18.37■□□□□ 0.53
PMS1-220ENST00000618056 LYZP61626 148 aa18.37■□□□□ 0.53
PMS1-220ENST00000618056 DLK1P80370 383 aa18.37■□□□□ 0.53
PMS1-220ENST00000618056 SIGLEC15Q6ZMC9 328 aa18.37■□□□□ 0.53
PMS1-220ENST00000618056 STPG3Q8N7X2 389 aa18.37■□□□□ 0.53
PMS1-220ENST00000618056 C2orf50Q96LR7 162 aa18.37■□□□□ 0.53
PMS1-220ENST00000618056 OVOL2Q9BRP0 275 aa18.37■□□□□ 0.53
PMS1-220ENST00000618056 TP53TG1Q9Y2A0 90 aa18.37■□□□□ 0.53
PMS1-220ENST00000618056 FNDC10F2Z333 226 aa18.36■□□□□ 0.53
PMS1-220ENST00000618056 METTL15P1P0C7V9 234 aa18.36■□□□□ 0.53
PMS1-220ENST00000618056 RPL35AP18077 110 aaKnown RBP18.36■□□□□ 0.53
PMS1-220ENST00000618056 SIX6O95475 246 aa18.35■□□□□ 0.53
PMS1-220ENST00000618056 H2BFSP57053 126 aa18.35■□□□□ 0.53
PMS1-220ENST00000618056 C1orf194Q5T5A4 169 aa18.35■□□□□ 0.53
PMS1-220ENST00000618056 GSG1LQ6UXU4 331 aa18.35■□□□□ 0.53
PMS1-220ENST00000618056 C9orf62Q8N4C0 152 aa18.35■□□□□ 0.53
PMS1-220ENST00000618056 OR10P1Q8NGE3 313 aa18.35■□□□□ 0.53
PMS1-220ENST00000618056 NRN1Q9NPD7 142 aa18.35■□□□□ 0.53
PMS1-220ENST00000618056 BOLA1Q9Y3E2 137 aa18.35■□□□□ 0.53
PMS1-220ENST00000618056 K7EPK0 472 aa18.34■□□□□ 0.53
PMS1-220ENST00000618056 SEPSECSQ9HD40 501 aaKnown RBP18.34■□□□□ 0.53
PMS1-220ENST00000618056 SLC45A2Q9UMX9 530 aa18.34■□□□□ 0.53
PMS1-220ENST00000618056 HSPB11Q9Y547 144 aa18.34■□□□□ 0.53
PMS1-220ENST00000618056 G3V3Q6 166 aa18.33■□□□□ 0.53
PMS1-220ENST00000618056 IL15RAQ13261 267 aa18.33■□□□□ 0.53
PMS1-220ENST00000618056 LEMD1Q68G75 181 aa18.33■□□□□ 0.53
PMS1-220ENST00000618056 BPIFCQ8NFQ6 507 aa18.33■□□□□ 0.53
PMS1-220ENST00000618056 OR11H4Q8NGC9 324 aa18.33■□□□□ 0.53
PMS1-220ENST00000618056 SMCO3A2RU48 225 aa18.33■□□□□ 0.52
PMS1-220ENST00000618056 L7N2F9 121 aa18.33■□□□□ 0.52
PMS1-220ENST00000618056 ZNF688P0C7X2 276 aa18.33■□□□□ 0.52
PMS1-220ENST00000618056 VAMP2P63027 116 aa18.33■□□□□ 0.52
PMS1-220ENST00000618056 CSTL1Q9H114 145 aa18.33■□□□□ 0.52
PMS1-220ENST00000618056 C11orf1Q9H5F2 150 aa18.33■□□□□ 0.52
PMS1-220ENST00000618056 FBXL17Q9UF56 701 aa18.33■□□□□ 0.52
PMS1-220ENST00000618056 LSM5Q9Y4Y9 91 aaKnown RBP18.33■□□□□ 0.52
PMS1-220ENST00000618056 STARD9Q9P2P6 4700 aa18.32■□□□□ 0.52
PMS1-220ENST00000618056 IFITM2Q01629 132 aa18.32■□□□□ 0.52
PMS1-220ENST00000618056 DEFB135Q30KP9 77 aa18.32■□□□□ 0.52
PMS1-220ENST00000618056 TMEM182Q6ZP80 229 aaPredicted RBP18.32■□□□□ 0.52
PMS1-220ENST00000618056 GGACTQ9BVM4 153 aa18.32■□□□□ 0.52
PMS1-220ENST00000618056 NPVFQ9HCQ7 196 aa18.32■□□□□ 0.52
PMS1-220ENST00000618056 RGS13O14921 159 aa18.31■□□□□ 0.52
PMS1-220ENST00000618056 SPRY2O43597 315 aa18.31■□□□□ 0.52
PMS1-220ENST00000618056 LYL1P12980 280 aa18.31■□□□□ 0.52
PMS1-220ENST00000618056 CASC10Q5T4H9 136 aa18.31■□□□□ 0.52
PMS1-220ENST00000618056 RNF183Q96D59 192 aa18.31■□□□□ 0.52
PMS1-220ENST00000618056 GATA2P23769 480 aaPredicted RBP18.3■□□□□ 0.52
PMS1-220ENST00000618056 SELENOTP62341 195 aa18.3■□□□□ 0.52
PMS1-220ENST00000618056 ARL16Q0P5N6 197 aa18.3■□□□□ 0.52
PMS1-220ENST00000618056 CYP2G1PQ6ZSU1 146 aa18.3■□□□□ 0.52
PMS1-220ENST00000618056 TENM2Q9NT68 2774 aa18.3■□□□□ 0.52
PMS1-220ENST00000618056 DEDDO75618 318 aa18.29■□□□□ 0.52
PMS1-220ENST00000618056 PVALBP20472 110 aaPredicted RBP18.29■□□□□ 0.52
PMS1-220ENST00000618056 SNRPD3P62318 126 aaKnown RBP18.29■□□□□ 0.52
PMS1-220ENST00000618056 Q5BKY6 102 aa18.29■□□□□ 0.52
PMS1-220ENST00000618056 S100A7P31151 101 aa18.28■□□□□ 0.52
PMS1-220ENST00000618056 TEPPQ6URK8 271 aa18.28■□□□□ 0.52
PMS1-220ENST00000618056 STHQ8IWL8 128 aa18.28■□□□□ 0.52
PMS1-220ENST00000618056 ORM2P19652 201 aa18.27■□□□□ 0.52
PMS1-220ENST00000618056 PLP1P60201 277 aa18.27■□□□□ 0.52
PMS1-220ENST00000618056 FGL1Q08830 312 aa18.27■□□□□ 0.52
PMS1-220ENST00000618056 RAB32Q13637 225 aa18.27■□□□□ 0.52
PMS1-220ENST00000618056 PSMG4Q5JS54 123 aa18.27■□□□□ 0.52
PMS1-220ENST00000618056 TRPT1Q86TN4 253 aaKnown RBP18.27■□□□□ 0.52
PMS1-220ENST00000618056 OR8I2Q8N0Y5 310 aa18.27■□□□□ 0.52
PMS1-220ENST00000618056 ZNF98A6NK75 572 aa18.26■□□□□ 0.51
PMS1-220ENST00000618056 CAV2P51636 162 aa18.26■□□□□ 0.51
PMS1-220ENST00000618056 S100A10P60903 97 aa18.26■□□□□ 0.51
PMS1-220ENST00000618056 TMEM147Q9BVK8 224 aa18.26■□□□□ 0.51
PMS1-220ENST00000618056 LYRM2Q9NU23 88 aaPredicted RBP18.26■□□□□ 0.51
PMS1-220ENST00000618056 FXYD6-FXYD2A0A087WZ82 144 aa18.26■□□□□ 0.51
PMS1-220ENST00000618056 C4BPBP20851 252 aa18.26■□□□□ 0.51
PMS1-220ENST00000618056 OR1B1Q8NGR6 318 aa18.26■□□□□ 0.51
PMS1-220ENST00000618056 IL17DQ8TAD2 202 aa18.26■□□□□ 0.51
PMS1-220ENST00000618056 GATAD1Q8WUU5 269 aa18.26■□□□□ 0.51
PMS1-220ENST00000618056 LINC00869P0C866 280 aa18.25■□□□□ 0.51
PMS1-220ENST00000618056 SLC38A11Q08AI6 406 aa18.25■□□□□ 0.51
PMS1-220ENST00000618056 FAM24AA6NFZ4 105 aa18.24■□□□□ 0.51
PMS1-220ENST00000618056 KNCNA6PVL3 124 aa18.24■□□□□ 0.51
PMS1-220ENST00000618056 HMSDA8MTL9 139 aa18.24■□□□□ 0.51
PMS1-220ENST00000618056 CA1P00915 261 aaPredicted RBP18.24■□□□□ 0.51
PMS1-220ENST00000618056 LGALSLQ3ZCW2 172 aaPredicted RBP18.24■□□□□ 0.51
PMS1-220ENST00000618056 ACTL10Q5JWF8 245 aa18.24■□□□□ 0.51
PMS1-220ENST00000618056 GPR82Q96P67 336 aa18.24■□□□□ 0.51
PMS1-220ENST00000618056 NMES1Q9C002 83 aa18.24■□□□□ 0.51
PMS1-220ENST00000618056 SOCS3O14543 225 aa18.23■□□□□ 0.51
PMS1-220ENST00000618056 HYPMO75409 117 aa18.23■□□□□ 0.51
PMS1-220ENST00000618056 CST7O76096 145 aa18.23■□□□□ 0.51
PMS1-220ENST00000618056 SPP1P10451 314 aa18.23■□□□□ 0.51
PMS1-220ENST00000618056 GALR1P47211 349 aa18.23■□□□□ 0.51
PMS1-220ENST00000618056 CYCSP99999 105 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms