RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 RSG1Q9BU20 258 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 ARL6Q9H0F7 186 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 CYTL1Q9NRR1 136 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 SLC39A9Q9NUM3 307 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 MLXQ9UH92 298 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 U3KQE9 123 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 BORCS7-ASMTA0A0B4J1R7 106 aa11.82□□□□□ -0.52
PCDHGC3-204ENST00000617222 A0A1W2PS18 150 aa11.82□□□□□ -0.52
PCDHGC3-204ENST00000617222 C17orf112F2Z3M2 114 aa11.82□□□□□ -0.52
PCDHGC3-204ENST00000617222 DEFB114Q30KQ6 69 aa11.82□□□□□ -0.52
PCDHGC3-204ENST00000617222 HSD17B11Q8NBQ5 300 aa11.82□□□□□ -0.52
PCDHGC3-204ENST00000617222 PPP1R14BQ96C90 147 aa11.82□□□□□ -0.52
PCDHGC3-204ENST00000617222 NARS2Q96I59 477 aaKnown RBP11.82□□□□□ -0.52
PCDHGC3-204ENST00000617222 GPR61Q9BZJ8 451 aa11.82□□□□□ -0.52
PCDHGC3-204ENST00000617222 RFNGQ9Y644 331 aa11.82□□□□□ -0.52
PCDHGC3-204ENST00000617222 KANTRA0A1W2PQU2 76 aa11.81□□□□□ -0.52
PCDHGC3-204ENST00000617222 G3V4G9 280 aa11.81□□□□□ -0.52
PCDHGC3-204ENST00000617222 IGLV1-51P01701 117 aa11.81□□□□□ -0.52
PCDHGC3-204ENST00000617222 BMI1P35226 326 aa11.81□□□□□ -0.52
PCDHGC3-204ENST00000617222 PXDC1Q5TGL8 231 aa11.81□□□□□ -0.52
PCDHGC3-204ENST00000617222 PATE2Q6UY27 113 aa11.81□□□□□ -0.52
PCDHGC3-204ENST00000617222 VSIRQ9H7M9 311 aa11.81□□□□□ -0.52
PCDHGC3-204ENST00000617222 TECRQ9NZ01 308 aaKnown RBP11.81□□□□□ -0.52
PCDHGC3-204ENST00000617222 PFDN2Q9UHV9 154 aa11.81□□□□□ -0.52
PCDHGC3-204ENST00000617222 HIGD1AQ9Y241 93 aa11.81□□□□□ -0.52
PCDHGC3-204ENST00000617222 BCL2L11O43521 198 aa11.8□□□□□ -0.52
PCDHGC3-204ENST00000617222 COX7A2P2O60397 106 aa11.8□□□□□ -0.52
PCDHGC3-204ENST00000617222 JTBO76095 146 aa11.8□□□□□ -0.52
PCDHGC3-204ENST00000617222 ATP6V0CP27449 155 aa11.8□□□□□ -0.52
PCDHGC3-204ENST00000617222 CD300EQ496F6 205 aaPredicted RBP11.8□□□□□ -0.52
PCDHGC3-204ENST00000617222 SAMD5Q5TGI4 173 aa11.8□□□□□ -0.52
PCDHGC3-204ENST00000617222 TMEM37Q8WXS4 190 aa11.8□□□□□ -0.52
PCDHGC3-204ENST00000617222 RNF2Q99496 336 aa11.8□□□□□ -0.52
PCDHGC3-204ENST00000617222 ARV1Q9H2C2 271 aa11.8□□□□□ -0.52
PCDHGC3-204ENST00000617222 TMEM231Q9H6L2 316 aa11.8□□□□□ -0.52
PCDHGC3-204ENST00000617222 DNAJC4Q9NNZ3 241 aa11.8□□□□□ -0.52
PCDHGC3-204ENST00000617222 KCNIP2Q9NS61 270 aa11.8□□□□□ -0.52
PCDHGC3-204ENST00000617222 WIPF1O43516 503 aa11.79□□□□□ -0.52
PCDHGC3-204ENST00000617222 BUB3O43684 328 aa11.79□□□□□ -0.52
PCDHGC3-204ENST00000617222 NKX2-5P52952 324 aaPredicted RBP11.79□□□□□ -0.52
PCDHGC3-204ENST00000617222 GCSAMLQ5JQS6 135 aa11.79□□□□□ -0.52
PCDHGC3-204ENST00000617222 FFAR4Q5NUL3 377 aa11.79□□□□□ -0.52
PCDHGC3-204ENST00000617222 C10orf113Q5VZT2 155 aa11.79□□□□□ -0.52
PCDHGC3-204ENST00000617222 C16orf54Q6UWD8 224 aa11.79□□□□□ -0.52
PCDHGC3-204ENST00000617222 OR1L4Q8NGR5 311 aa11.79□□□□□ -0.52
PCDHGC3-204ENST00000617222 GRAMD2BQ96HH9 432 aa11.79□□□□□ -0.52
PCDHGC3-204ENST00000617222 UHRF2Q96PU4 802 aa11.79□□□□□ -0.52
PCDHGC3-204ENST00000617222 ZNF471Q9BX82 626 aaPredicted RBP11.79□□□□□ -0.52
PCDHGC3-204ENST00000617222 SLC25A39Q9BZJ4 359 aaPredicted RBP11.79□□□□□ -0.52
PCDHGC3-204ENST00000617222 TIMM9Q9Y5J7 89 aa11.79□□□□□ -0.52
PCDHGC3-204ENST00000617222 ELOA3CA0A087WX78 387 aaPredicted RBP11.78□□□□□ -0.52
PCDHGC3-204ENST00000617222 IZUMO1RA6ND01 250 aa11.78□□□□□ -0.52
PCDHGC3-204ENST00000617222 ZNF98A6NK75 572 aa11.78□□□□□ -0.52
PCDHGC3-204ENST00000617222 S100A7P31151 101 aa11.78□□□□□ -0.52
PCDHGC3-204ENST00000617222 LAMTOR1Q6IAA8 161 aa11.78□□□□□ -0.52
PCDHGC3-204ENST00000617222 RBPMS2Q6ZRY4 209 aaKnown RBP11.78□□□□□ -0.52
PCDHGC3-204ENST00000617222 TCF24Q7RTU0 167 aa11.78□□□□□ -0.52
PCDHGC3-204ENST00000617222 C9orf62Q8N4C0 152 aa11.78□□□□□ -0.52
PCDHGC3-204ENST00000617222 SHANK2-AS3Q9BTD1 123 aa11.78□□□□□ -0.52
PCDHGC3-204ENST00000617222 SCRT1Q9BWW7 348 aa11.78□□□□□ -0.52
PCDHGC3-204ENST00000617222 SH3BGRL3Q9H299 93 aa11.78□□□□□ -0.52
PCDHGC3-204ENST00000617222 H3BRN7 92 aa11.77□□□□□ -0.53
PCDHGC3-204ENST00000617222 RPL11P62913 178 aaKnown RBP11.77□□□□□ -0.53
PCDHGC3-204ENST00000617222 FAM90A2PQ658T7 463 aa11.77□□□□□ -0.53
PCDHGC3-204ENST00000617222 LEMD1Q68G75 181 aa11.77□□□□□ -0.53
PCDHGC3-204ENST00000617222 LINC00305Q7Z4B0 112 aa11.77□□□□□ -0.53
PCDHGC3-204ENST00000617222 S100A7AQ86SG5 101 aa11.77□□□□□ -0.53
PCDHGC3-204ENST00000617222 TMEM61Q8N0U2 210 aa11.77□□□□□ -0.53
PCDHGC3-204ENST00000617222 OR2K2Q8NGT1 345 aa11.77□□□□□ -0.53
PCDHGC3-204ENST00000617222 GLMPQ8WWB7 406 aa11.77□□□□□ -0.53
PCDHGC3-204ENST00000617222 GNPNAT1Q96EK6 184 aaPredicted RBP11.77□□□□□ -0.53
PCDHGC3-204ENST00000617222 PFDN5Q99471 154 aa11.77□□□□□ -0.53
PCDHGC3-204ENST00000617222 PSMG3Q9BT73 122 aaPredicted RBP11.77□□□□□ -0.53
PCDHGC3-204ENST00000617222 SLC25A22Q9H936 323 aa11.77□□□□□ -0.53
PCDHGC3-204ENST00000617222 MGAM2Q2M2H8 2515 aa11.77□□□□□ -0.53
PCDHGC3-204ENST00000617222 IGKV3-7A0A075B6H7 116 aa11.76□□□□□ -0.53
PCDHGC3-204ENST00000617222 GUCA2BQ16661 112 aa11.76□□□□□ -0.53
PCDHGC3-204ENST00000617222 C1orf194Q5T5A4 169 aa11.76□□□□□ -0.53
PCDHGC3-204ENST00000617222 LCN12Q6JVE5 192 aa11.76□□□□□ -0.53
PCDHGC3-204ENST00000617222 OR8I2Q8N0Y5 310 aa11.76□□□□□ -0.53
PCDHGC3-204ENST00000617222 GATAD1Q8WUU5 269 aa11.76□□□□□ -0.53
PCDHGC3-204ENST00000617222 SLC25A32Q9H2D1 315 aa11.76□□□□□ -0.53
PCDHGC3-204ENST00000617222 CMYA5Q8N3K9 4069 aa11.76□□□□□ -0.53
PCDHGC3-204ENST00000617222 TRAV25A0A0B4J276 109 aa11.75□□□□□ -0.53
PCDHGC3-204ENST00000617222 ZNF785A8K8V0 405 aa11.75□□□□□ -0.53
PCDHGC3-204ENST00000617222 CD5P06127 495 aa11.75□□□□□ -0.53
PCDHGC3-204ENST00000617222 KRTAP10-11P60412 298 aa11.75□□□□□ -0.53
PCDHGC3-204ENST00000617222 EIF5AP63241 154 aaKnown RBP11.75□□□□□ -0.53
PCDHGC3-204ENST00000617222 ACOT6Q3I5F7 207 aaPredicted RBP11.75□□□□□ -0.53
PCDHGC3-204ENST00000617222 MORN5Q5VZ52 161 aa11.75□□□□□ -0.53
PCDHGC3-204ENST00000617222 SIGLEC15Q6ZMC9 328 aa11.75□□□□□ -0.53
PCDHGC3-204ENST00000617222 OR2G3Q8NGZ4 309 aa11.75□□□□□ -0.53
PCDHGC3-204ENST00000617222 TRAV5A0A0B4J249 113 aa11.74□□□□□ -0.53
PCDHGC3-204ENST00000617222 HELTA6NFD8 242 aa11.74□□□□□ -0.53
PCDHGC3-204ENST00000617222 TSPAN4O14817 238 aa11.74□□□□□ -0.53
PCDHGC3-204ENST00000617222 RAB2AP61019 212 aa11.74□□□□□ -0.53
PCDHGC3-204ENST00000617222 SERF2P84101 59 aa11.74□□□□□ -0.53
PCDHGC3-204ENST00000617222 EGFEM1PQ0D2K5 195 aa11.74□□□□□ -0.53
PCDHGC3-204ENST00000617222 BEAN1Q3B7T3 259 aa11.74□□□□□ -0.53
PCDHGC3-204ENST00000617222 FAM78BQ5VT40 261 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms