RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 HSPB1P04792 205 aaKnown RBP13.31□□□□□ -0.28
TRAPPC3-209ENST00000616395 EGR2P11161 476 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC3-209ENST00000616395 TAGLN2P37802 199 aaKnown RBP13.31□□□□□ -0.28
TRAPPC3-209ENST00000616395 PPT1P50897 306 aa13.31□□□□□ -0.28
TRAPPC3-209ENST00000616395 C19orf54Q5BKX5 351 aa13.31□□□□□ -0.28
TRAPPC3-209ENST00000616395 S100A7AQ86SG5 101 aa13.31□□□□□ -0.28
TRAPPC3-209ENST00000616395 SFT2D1Q8WV19 159 aa13.31□□□□□ -0.28
TRAPPC3-209ENST00000616395 ACY3Q96HD9 319 aa13.31□□□□□ -0.28
TRAPPC3-209ENST00000616395 RNF2Q99496 336 aa13.31□□□□□ -0.28
TRAPPC3-209ENST00000616395 PXMP4Q9Y6I8 212 aa13.31□□□□□ -0.28
TRAPPC3-209ENST00000616395 ZFP92A6NM28 416 aa13.3□□□□□ -0.28
TRAPPC3-209ENST00000616395 REG1AP05451 166 aa13.3□□□□□ -0.28
TRAPPC3-209ENST00000616395 AREGP15514 252 aa13.3□□□□□ -0.28
TRAPPC3-209ENST00000616395 CTRB1P17538 263 aa13.3□□□□□ -0.28
TRAPPC3-209ENST00000616395 GAMTQ14353 236 aa13.3□□□□□ -0.28
TRAPPC3-209ENST00000616395 PVRIGQ6DKI7 326 aa13.3□□□□□ -0.28
TRAPPC3-209ENST00000616395 CTRB2Q6GPI1 263 aa13.3□□□□□ -0.28
TRAPPC3-209ENST00000616395 GTSCR1Q86UQ5 136 aa13.3□□□□□ -0.28
TRAPPC3-209ENST00000616395 TTC9CQ8N5M4 171 aa13.3□□□□□ -0.28
TRAPPC3-209ENST00000616395 SMDT1Q9H4I9 107 aa13.3□□□□□ -0.28
TRAPPC3-209ENST00000616395 TNCP24821 2201 aa13.29□□□□□ -0.28
TRAPPC3-209ENST00000616395 TRAV30A0A087WSZ9 112 aa13.29□□□□□ -0.28
TRAPPC3-209ENST00000616395 TRAV1-1A0A0B4J248 108 aa13.29□□□□□ -0.28
TRAPPC3-209ENST00000616395 CTXND1A0A1B0GTU2 59 aa13.29□□□□□ -0.28
TRAPPC3-209ENST00000616395 CRYGCP07315 174 aa13.29□□□□□ -0.28
TRAPPC3-209ENST00000616395 B2MP61769 119 aa13.29□□□□□ -0.28
TRAPPC3-209ENST00000616395 LYPD6BQ8NI32 183 aa13.29□□□□□ -0.28
TRAPPC3-209ENST00000616395 GGTLC1Q9BX51 225 aa13.29□□□□□ -0.28
TRAPPC3-209ENST00000616395 TREM1Q9NP99 234 aa13.29□□□□□ -0.28
TRAPPC3-209ENST00000616395 RPRMQ9NS64 109 aa13.29□□□□□ -0.28
TRAPPC3-209ENST00000616395 APELAP0DMC3 54 aa13.28□□□□□ -0.28
TRAPPC3-209ENST00000616395 NPBWR1P48145 328 aa13.28□□□□□ -0.28
TRAPPC3-209ENST00000616395 CDC34P49427 236 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC3-209ENST00000616395 RHOBP62745 196 aa13.28□□□□□ -0.28
TRAPPC3-209ENST00000616395 UNQ5815/PRO19632Q6UWF5 114 aa13.28□□□□□ -0.28
TRAPPC3-209ENST00000616395 OR1L4Q8NGR5 311 aa13.28□□□□□ -0.28
TRAPPC3-209ENST00000616395 MBD3L1Q8WWY6 194 aa13.28□□□□□ -0.28
TRAPPC3-209ENST00000616395 NARS2Q96I59 477 aaKnown RBP13.28□□□□□ -0.28
TRAPPC3-209ENST00000616395 PFDN5Q99471 154 aa13.28□□□□□ -0.28
TRAPPC3-209ENST00000616395 MGST2Q99735 147 aa13.28□□□□□ -0.28
TRAPPC3-209ENST00000616395 EIF5A2Q9GZV4 153 aaKnown RBP13.28□□□□□ -0.28
TRAPPC3-209ENST00000616395 A0A1B0GW64 132 aa13.27□□□□□ -0.29
TRAPPC3-209ENST00000616395 MAP1LC3B2A6NCE7 125 aa13.27□□□□□ -0.29
TRAPPC3-209ENST00000616395 CXorf65A6NEN9 183 aa13.27□□□□□ -0.29
TRAPPC3-209ENST00000616395 OR10J1P30954 320 aa13.27□□□□□ -0.29
TRAPPC3-209ENST00000616395 S100A7P31151 101 aa13.27□□□□□ -0.29
TRAPPC3-209ENST00000616395 RND2P52198 227 aa13.27□□□□□ -0.29
TRAPPC3-209ENST00000616395 CRIP2P52943 208 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC3-209ENST00000616395 PMS2P11Q13670 270 aa13.27□□□□□ -0.29
TRAPPC3-209ENST00000616395 FAM122CQ6P4D5 195 aa13.27□□□□□ -0.29
TRAPPC3-209ENST00000616395 CYP2G1PQ6ZSU1 146 aa13.27□□□□□ -0.29
TRAPPC3-209ENST00000616395 TMEM116Q8NCL8 245 aa13.27□□□□□ -0.29
TRAPPC3-209ENST00000616395 NPIPB3Q92617 1050 aa13.27□□□□□ -0.29
TRAPPC3-209ENST00000616395 MAP1LC3BQ9GZQ8 125 aa13.27□□□□□ -0.29
TRAPPC3-209ENST00000616395 TAS2R45P59539 299 aa13.26□□□□□ -0.29
TRAPPC3-209ENST00000616395 DEFA5Q01523 94 aa13.26□□□□□ -0.29
TRAPPC3-209ENST00000616395 AKIRIN2Q53H80 203 aa13.26□□□□□ -0.29
TRAPPC3-209ENST00000616395 STPG3Q8N7X2 389 aa13.26□□□□□ -0.29
TRAPPC3-209ENST00000616395 THAP8Q8NA92 274 aa13.26□□□□□ -0.29
TRAPPC3-209ENST00000616395 BPIFCQ8NFQ6 507 aa13.26□□□□□ -0.29
TRAPPC3-209ENST00000616395 FAM210AQ96ND0 272 aa13.26□□□□□ -0.29
TRAPPC3-209ENST00000616395 MS4A10Q96PG2 267 aa13.26□□□□□ -0.29
TRAPPC3-209ENST00000616395 TRGV9Q99603 122 aa13.26□□□□□ -0.29
TRAPPC3-209ENST00000616395 ABCA13Q86UQ4 5058 aa13.26□□□□□ -0.29
TRAPPC3-209ENST00000616395 FHITP49789 147 aa13.25□□□□□ -0.29
TRAPPC3-209ENST00000616395 MFAP4P55083 255 aa13.25□□□□□ -0.29
TRAPPC3-209ENST00000616395 GUK1Q16774 197 aa13.25□□□□□ -0.29
TRAPPC3-209ENST00000616395 PLA2G2EQ9NZK7 142 aa13.25□□□□□ -0.29
TRAPPC3-209ENST00000616395 SLC45A2Q9UMX9 530 aa13.25□□□□□ -0.29
TRAPPC3-209ENST00000616395 RNF24Q9Y225 148 aa13.25□□□□□ -0.29
TRAPPC3-209ENST00000616395 ZP3P21754 424 aa13.24□□□□□ -0.29
TRAPPC3-209ENST00000616395 PSMB3P49720 205 aa13.24□□□□□ -0.29
TRAPPC3-209ENST00000616395 MIC13Q5XKP0 118 aa13.24□□□□□ -0.29
TRAPPC3-209ENST00000616395 LCN15Q6UWW0 184 aa13.24□□□□□ -0.29
TRAPPC3-209ENST00000616395 OR5T1Q8NG75 326 aa13.24□□□□□ -0.29
TRAPPC3-209ENST00000616395 OR4X1Q8NH49 305 aa13.24□□□□□ -0.29
TRAPPC3-209ENST00000616395 TXN2Q99757 166 aa13.24□□□□□ -0.29
TRAPPC3-209ENST00000616395 MRPL32Q9BYC8 188 aaKnown RBP13.24□□□□□ -0.29
TRAPPC3-209ENST00000616395 MANBALQ9NQG1 85 aa13.24□□□□□ -0.29
TRAPPC3-209ENST00000616395 ZNF355PQ9NSJ1 428 aa13.24□□□□□ -0.29
TRAPPC3-209ENST00000616395 ELOA3CA0A087WX78 387 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC3-209ENST00000616395 ANKRD34BA5PLL1 514 aa13.23□□□□□ -0.29
TRAPPC3-209ENST00000616395 IZUMO1RA6ND01 250 aa13.23□□□□□ -0.29
TRAPPC3-209ENST00000616395 NUPR2A6NF83 97 aa13.23□□□□□ -0.29
TRAPPC3-209ENST00000616395 COX7A2P2O60397 106 aa13.23□□□□□ -0.29
TRAPPC3-209ENST00000616395 CXorf1O96002 111 aa13.23□□□□□ -0.29
TRAPPC3-209ENST00000616395 PRR20EP86478 221 aa13.23□□□□□ -0.29
TRAPPC3-209ENST00000616395 PRR20CP86479 221 aa13.23□□□□□ -0.29
TRAPPC3-209ENST00000616395 PRR20DP86480 221 aa13.23□□□□□ -0.29
TRAPPC3-209ENST00000616395 PRR20BP86481 221 aa13.23□□□□□ -0.29
TRAPPC3-209ENST00000616395 PRR20AP86496 221 aa13.23□□□□□ -0.29
TRAPPC3-209ENST00000616395 LCN12Q6JVE5 192 aa13.23□□□□□ -0.29
TRAPPC3-209ENST00000616395 FNDC4Q9H6D8 234 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC3-209ENST00000616395 RBFOX3A6NFN3 312 aa13.22□□□□□ -0.29
TRAPPC3-209ENST00000616395 GNG7O60262 68 aa13.22□□□□□ -0.29
TRAPPC3-209ENST00000616395 TPPP2P59282 170 aa13.22□□□□□ -0.29
TRAPPC3-209ENST00000616395 IQCF2Q8IXL9 164 aa13.22□□□□□ -0.29
TRAPPC3-209ENST00000616395 OR9G4Q8NGQ1 327 aa13.22□□□□□ -0.29
TRAPPC3-209ENST00000616395 VN1R17PQ8TDU5 208 aa13.22□□□□□ -0.29
TRAPPC3-209ENST00000616395 RAB24Q969Q5 203 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms