RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 F2Z2F3 143 aa11.15□□□□□ -0.62
CACNA1C-231ENST00000616390 COA6Q5JTJ3 125 aaKnown RBP11.15□□□□□ -0.62
CACNA1C-231ENST00000616390 TCF24Q7RTU0 167 aa11.15□□□□□ -0.62
CACNA1C-231ENST00000616390 GBGT1Q8N5D6 347 aa11.15□□□□□ -0.62
CACNA1C-231ENST00000616390 FAM167A-AS1Q96KT0 104 aa11.15□□□□□ -0.62
CACNA1C-231ENST00000616390 ONECUT1Q9UBC0 465 aa11.15□□□□□ -0.62
CACNA1C-231ENST00000616390 CACNA1BQ00975 2339 aa11.15□□□□□ -0.63
CACNA1C-231ENST00000616390 CCL21O00585 134 aa11.14□□□□□ -0.63
CACNA1C-231ENST00000616390 CD24P25063 80 aa11.14□□□□□ -0.63
CACNA1C-231ENST00000616390 RPS20P60866 119 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-231ENST00000616390 PLGLAQ15195 96 aa11.14□□□□□ -0.63
CACNA1C-231ENST00000616390 BTF3L4Q96K17 158 aa11.14□□□□□ -0.63
CACNA1C-231ENST00000616390 IGKV1D-37A0A075B6S9 117 aa11.14□□□□□ -0.63
CACNA1C-231ENST00000616390 TCRBV4S1A1TA0A5B7 111 aa11.14□□□□□ -0.63
CACNA1C-231ENST00000616390 MFAP2P55001 183 aa11.14□□□□□ -0.63
CACNA1C-231ENST00000616390 CDSNQ15517 529 aa11.14□□□□□ -0.63
CACNA1C-231ENST00000616390 IBA57Q5T440 356 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-231ENST00000616390 FBXL15Q9H469 300 aa11.14□□□□□ -0.63
CACNA1C-231ENST00000616390 TNFRSF19Q9NS68 423 aa11.14□□□□□ -0.63
CACNA1C-231ENST00000616390 SPTAN1Q13813 2472 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-231ENST00000616390 TRAV25A0A0B4J276 109 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 PPIAL4CA0A0B4J2A2 164 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 PPIAL4GP0DN37 164 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 BAGE3Q86Y29 109 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 BAGE2Q86Y30 109 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 RNASEH2CQ8TDP1 164 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 FAM168AQ92567 244 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 NAT8BQ9UHF3 227 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 PSMB11A5LHX3 300 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 CRISP2P16562 243 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 RPL27AP46776 148 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 MRGPRG-AS1Q2M3A8 158 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 VKORC1Q9BQB6 163 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 KAAG1Q9UBP8 84 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 AMMECR1Q9Y4X0 333 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 IGHV2-70DA0A0C4DH43 119 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 TOX4O94842 621 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 ATP5IP56385 69 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 ZNF705AQ6ZN79 300 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 PNKDQ8N490 385 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 LINC00311Q8N616 119 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 CMTM2Q8TAZ6 248 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 C19orf24Q9BVV8 132 aa11.13□□□□□ -0.63
CACNA1C-231ENST00000616390 IGLC7A0M8Q6 106 aa11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 OR4A5Q8NH83 315 aa11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 RPEQ96AT9 228 aa11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 MS4A10Q96PG2 267 aa11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 FAM103A1Q9BTL3 118 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 MEGF9Q9H1U4 602 aa11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 HILPDAQ9Y5L2 63 aa11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 MAP1AP78559 2803 aaPredicted RBP11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 IGHV1-3A0A0C4DH29 117 aa11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 A0A1W2PRE2 83 aa11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 ZNF705FA8MVS1 300 aaPredicted RBP11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 GNG7O60262 68 aa11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 IGLV2-8P01709 118 aa11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 ZNF705DP0CH99 300 aaPredicted RBP11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 ZNF705BP0CI00 300 aaPredicted RBP11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 YPEL3P61236 119 aaPredicted RBP11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 OR1L4Q8NGR5 311 aa11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 MRPL32Q9BYC8 188 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-231ENST00000616390 KIR2DL5BA0A0G2JN68 375 aa11.11□□□□□ -0.63
CACNA1C-231ENST00000616390 KIR2DL5BA0A0G2JPC4 375 aa11.11□□□□□ -0.63
CACNA1C-231ENST00000616390 BUB1B-PAK6H3BSN5 160 aa11.11□□□□□ -0.63
CACNA1C-231ENST00000616390 SERF1AO75920 110 aa11.11□□□□□ -0.63
CACNA1C-231ENST00000616390 GCGP01275 180 aa11.11□□□□□ -0.63
CACNA1C-231ENST00000616390 C1orf194Q5T5A4 169 aa11.11□□□□□ -0.63
CACNA1C-231ENST00000616390 KIR2DL5AQ8N109 375 aa11.11□□□□□ -0.63
CACNA1C-231ENST00000616390 RAXQ9Y2V3 346 aa11.11□□□□□ -0.63
CACNA1C-231ENST00000616390 ISLRO14498 428 aa11.11□□□□□ -0.63
CACNA1C-231ENST00000616390 NDUFB8O95169 186 aa11.11□□□□□ -0.63
CACNA1C-231ENST00000616390 ZNF672Q499Z4 452 aaPredicted RBP11.11□□□□□ -0.63
CACNA1C-231ENST00000616390 CLEC7AQ9BXN2 247 aa11.11□□□□□ -0.63
CACNA1C-231ENST00000616390 GEMIN7Q9H840 131 aaKnown RBP11.11□□□□□ -0.63
CACNA1C-231ENST00000616390 TP53TG3Q9ULZ0 132 aa11.11□□□□□ -0.63
CACNA1C-231ENST00000616390 SIGLEC9Q9Y336 463 aa11.11□□□□□ -0.63
CACNA1C-231ENST00000616390 S4R3C0 116 aa11.11□□□□□ -0.63
CACNA1C-231ENST00000616390 LOC102724200A0A096LPH7 203 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-231ENST00000616390 SNAI2O43623 268 aa11.1□□□□□ -0.63
CACNA1C-231ENST00000616390 CNIH1O95406 144 aa11.1□□□□□ -0.63
CACNA1C-231ENST00000616390 PGPA6NDG6 321 aa11.1□□□□□ -0.63
CACNA1C-231ENST00000616390 SLC25A5P05141 298 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-231ENST00000616390 BATFQ16520 125 aa11.1□□□□□ -0.63
CACNA1C-231ENST00000616390 ZNF841Q6ZN19 808 aa11.1□□□□□ -0.63
CACNA1C-231ENST00000616390 PPP1R27Q86WC6 154 aa11.1□□□□□ -0.63
CACNA1C-231ENST00000616390 SAMD10Q9BYL1 202 aa11.1□□□□□ -0.63
CACNA1C-231ENST00000616390 TPTE2P1Q5T6R2 138 aa11.09□□□□□ -0.63
CACNA1C-231ENST00000616390 FAM71F2Q6NXP2 309 aa11.09□□□□□ -0.63
CACNA1C-231ENST00000616390 ZNF329Q86UD4 541 aa11.09□□□□□ -0.63
CACNA1C-231ENST00000616390 IGF2BP2-AS1Q96M15 143 aa11.09□□□□□ -0.63
CACNA1C-231ENST00000616390 LY96Q9Y6Y9 160 aa11.09□□□□□ -0.63
CACNA1C-231ENST00000616390 ZFHX3Q15911 3703 aa11.09□□□□□ -0.63
CACNA1C-231ENST00000616390 PEX7O00628 323 aa11.09□□□□□ -0.63
CACNA1C-231ENST00000616390 IGLV1-47P01700 117 aa11.09□□□□□ -0.63
CACNA1C-231ENST00000616390 RBP4P02753 201 aa11.09□□□□□ -0.63
CACNA1C-231ENST00000616390 ZNF137PP52743 207 aa11.09□□□□□ -0.63
CACNA1C-231ENST00000616390 CKS1BP61024 79 aa11.09□□□□□ -0.63
CACNA1C-231ENST00000616390 LYZP61626 148 aa11.09□□□□□ -0.63
CACNA1C-231ENST00000616390 KLRD1Q13241 179 aa11.09□□□□□ -0.63
CACNA1C-231ENST00000616390 FBLN7Q53RD9 439 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms