RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 RPP25LQ8N5L8 163 aaKnown RBP6.13□□□□□ -1.43
PCDH9-205ENST00000614931 OR1B1Q8NGR6 318 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 FAM213BQ8TBF2 198 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 TMEM190Q8WZ59 177 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 PBDC1Q9BVG4 233 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 KCNIP2Q9NS61 270 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 GAR1Q9NY12 217 aaKnown RBP6.13□□□□□ -1.43
PCDH9-205ENST00000614931 MRPL27Q9P0M9 148 aaKnown RBP6.13□□□□□ -1.43
PCDH9-205ENST00000614931 TRRAPQ9Y4A5 3859 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 SEC14L6B5MCN3 397 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 LINC01619G3V211 115 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 G3V4G9 280 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 H3BRN7 92 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 COX7A2P2O60397 106 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 IFNA7P01567 189 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 APOHP02749 345 aaPredicted RBP6.12□□□□□ -1.43
PCDH9-205ENST00000614931 NMBP08949 121 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 RELQ04864 619 aaPredicted RBP6.12□□□□□ -1.43
PCDH9-205ENST00000614931 RPEL1Q2QD12 228 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 BEAN1Q3B7T3 259 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 SAMD5Q5TGI4 173 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 LEMD1Q68G75 181 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 Q6ZRG5 221 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 OR11H1Q8NG94 326 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 OR4F17Q8NGA8 305 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 OR10G4Q8NGN3 311 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 OR10G9Q8NGN4 311 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 OR10G7Q8NGN6 311 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 OR1N2Q8NGR9 330 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 Q8WTZ3 238 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 ZNF503Q96F45 646 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 FAM167A-AS1Q96KT0 104 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 OR4F4Q96R69 305 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 SCRT1Q9BWW7 348 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 SEPSECSQ9HD40 501 aaKnown RBP6.12□□□□□ -1.43
PCDH9-205ENST00000614931 UBQLN2Q9UHD9 624 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 HIGD1AQ9Y241 93 aa6.12□□□□□ -1.43
PCDH9-205ENST00000614931 IGHV3OR16-13A0A075B7E8 117 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 IGHV3-49A0A0A0MS15 119 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 IGHV3-74A0A0B4J1X5 117 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 A0A1B0GV50 99 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 UMAD1C9J7I0 102 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 CCL24O00175 119 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 HMGB3O15347 200 aaKnown RBP6.11□□□□□ -1.43
PCDH9-205ENST00000614931 HYPMO75409 117 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 SCGB2A1O75556 95 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 FABP1P07148 127 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 CDC34P49427 236 aaPredicted RBP6.11□□□□□ -1.43
PCDH9-205ENST00000614931 SYNJ2BPP57105 145 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 KLF5Q13887 457 aaPredicted RBP6.11□□□□□ -1.43
PCDH9-205ENST00000614931 TM4SF20Q53R12 229 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 FAM78BQ5VT40 261 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 C10orf113Q5VZT2 155 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 ADAMTSL5Q6ZMM2 481 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 ZNF767PQ75MW2 155 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 LINC00305Q7Z4B0 112 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 REC114Q7Z4M0 266 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 GPHB5Q86YW7 130 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 OR1L4Q8NGR5 311 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 GATAD1Q8WUU5 269 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 DLX4Q92988 240 aaPredicted RBP6.11□□□□□ -1.43
PCDH9-205ENST00000614931 RAB24Q969Q5 203 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 SHANK2-AS3Q9BTD1 123 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 C20orf24Q9BUV8 137 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 SLC25A2Q9BXI2 301 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 SLC25A39Q9BZJ4 359 aaPredicted RBP6.11□□□□□ -1.43
PCDH9-205ENST00000614931 DNAJC4Q9NNZ3 241 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 FUT9Q9Y231 359 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 SELENOKQ9Y6D0 94 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 U3KQE9 123 aa6.11□□□□□ -1.43
PCDH9-205ENST00000614931 IGHV3-66A0A0C4DH42 116 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 CTXND1A0A1B0GTU2 59 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 ZNF320A2RRD8 509 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 TMEM213A2RRL7 107 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 ZNF705EA8MWA4 302 aaPredicted RBP6.1□□□□□ -1.43
PCDH9-205ENST00000614931 A8MWP6 167 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 TEX46H3BTG2 121 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 MRPS12O15235 138 aaKnown RBP6.1□□□□□ -1.43
PCDH9-205ENST00000614931 MBP02144 154 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 ZP3P21754 424 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 CRYBB3P26998 211 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 FGF8P55075 233 aaPredicted RBP6.1□□□□□ -1.43
PCDH9-205ENST00000614931 CCL20P78556 96 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 PXDC1Q5TGL8 231 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 EIF5AL1Q6IS14 154 aaKnown RBP6.1□□□□□ -1.43
PCDH9-205ENST00000614931 LCN15Q6UWW0 184 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 DPPA3Q6W0C5 159 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 WFDC9Q8NEX5 89 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 RNF141Q8WVD5 230 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 MBD3L1Q8WWY6 194 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 C17orf77Q96MU5 243 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 PFDN5Q99471 154 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 MRPL32Q9BYC8 188 aaKnown RBP6.1□□□□□ -1.43
PCDH9-205ENST00000614931 ACTR3CQ9C0K3 210 aaPredicted RBP6.1□□□□□ -1.43
PCDH9-205ENST00000614931 RABAC1Q9UI14 185 aa6.1□□□□□ -1.43
PCDH9-205ENST00000614931 ELOA3CA0A087WX78 387 aaPredicted RBP6.09□□□□□ -1.43
PCDH9-205ENST00000614931 IGHV7-4-1A0A0J9YVY3 117 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 MAP1LC3B2A6NCE7 125 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 ZNF98A6NK75 572 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 LGALS9O00182 355 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms