RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 AKR1C1Q04828 323 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 ZNF767PQ75MW2 155 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 BPIFCQ8NFQ6 507 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 OR1B1Q8NGR6 318 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 METTL26Q96S19 204 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 PARD6GQ9BYG4 376 aaPredicted RBP4.17□□□□□ -1.74
CPNE3-208ENST00000614678 PLA2G2EQ9NZK7 142 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 K7EQG2 157 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 DNASE2O00115 360 aaPredicted RBP4.17□□□□□ -1.74
CPNE3-208ENST00000614678 CORTO00230 105 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 LYL1P12980 280 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 CAV2P51636 162 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 ELLP55199 621 aaPredicted RBP4.17□□□□□ -1.74
CPNE3-208ENST00000614678 C16orf54Q6UWD8 224 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 ENKURQ8TC29 256 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 STRAPQ9Y3F4 350 aaKnown RBP4.17□□□□□ -1.74
CPNE3-208ENST00000614678 INMT-MINDY4F8WBC2 141 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 YPEL3P61236 119 aaPredicted RBP4.17□□□□□ -1.74
CPNE3-208ENST00000614678 FGL1Q08830 312 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 PMS2P11Q13670 270 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 KIR3DS1Q14943 382 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 Q8WTZ3 238 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 MGST2Q99735 147 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 C7orf50Q9BRJ6 194 aaKnown RBP4.17□□□□□ -1.74
CPNE3-208ENST00000614678 DUXBA0A1W2PPF3 345 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 SLC25A6P12236 298 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 OR1S2Q8NGQ3 325 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 DEDD2Q8WXF8 326 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 S100ZQ8WXG8 99 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 TMEM37Q8WXS4 190 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 MARC2Q969Z3 335 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 LINC00052Q96N35 136 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 SLC25A32Q9H2D1 315 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 LOC102724200A0A096LPH7 203 aaPredicted RBP4.16□□□□□ -1.74
CPNE3-208ENST00000614678 FAM90A26D6RGX4 464 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 IFNA21P01568 189 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 SLC25A4P12235 298 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 MIC13Q5XKP0 118 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 SLC35E1Q96K37 410 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 SIGLEC15Q6ZMC9 328 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 THAP8Q8NA92 274 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 OR2K2Q8NGT1 345 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 SMIM8Q96KF7 97 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 GINS3Q9BRX5 216 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 MARVELD1Q9BSK0 173 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 RNF126Q9BV68 326 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 ZMAT4Q9H898 229 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 RPS10-NUDT3A0A1W2PQS6 291 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 ZNF705FA8MVS1 300 aaPredicted RBP4.16□□□□□ -1.74
CPNE3-208ENST00000614678 SNRPGP15A8MWD9 76 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 SLC17A3O00476 420 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 SOCS3O14543 225 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 S100A1P23297 94 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 CLINT1Q14677 625 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 SPATA31B1PQ5VZV4 182 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 MUC7Q8TAX7 377 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 GGTLC1Q9BX51 225 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 SMIM3Q9BZL3 60 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 ARL6Q9H0F7 186 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 SLC35B3Q9H1N7 401 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 ALG5Q9Y673 324 aa4.16□□□□□ -1.74
CPNE3-208ENST00000614678 TRAV8-2A0A0B4J237 113 aa4.15□□□□□ -1.74
CPNE3-208ENST00000614678 UBE2L5PA0A1B0GUS4 154 aa4.15□□□□□ -1.74
CPNE3-208ENST00000614678 IL5P05113 134 aa4.15□□□□□ -1.74
CPNE3-208ENST00000614678 LINC00869P0C866 280 aa4.15□□□□□ -1.74
CPNE3-208ENST00000614678 NHLRC4P0CG21 123 aaPredicted RBP4.15□□□□□ -1.74
CPNE3-208ENST00000614678 LAMTOR1Q6IAA8 161 aa4.15□□□□□ -1.74
CPNE3-208ENST00000614678 TMEM252Q8N6L7 170 aa4.15□□□□□ -1.74
CPNE3-208ENST00000614678 OR11H7Q8NGC8 314 aa4.15□□□□□ -1.74
CPNE3-208ENST00000614678 C2orf50Q96LR7 162 aa4.15□□□□□ -1.74
CPNE3-208ENST00000614678 RAB40CQ96S21 281 aa4.15□□□□□ -1.74
CPNE3-208ENST00000614678 SPATA25Q9BR10 227 aa4.15□□□□□ -1.74
CPNE3-208ENST00000614678 RSG1Q9BU20 258 aa4.15□□□□□ -1.74
CPNE3-208ENST00000614678 XCL2Q9UBD3 114 aa4.15□□□□□ -1.74
CPNE3-208ENST00000614678 OR4C46A6NHA9 309 aa4.15□□□□□ -1.75
CPNE3-208ENST00000614678 ZNF98A6NK75 572 aa4.15□□□□□ -1.75
CPNE3-208ENST00000614678 SMLR1H3BR10 107 aa4.15□□□□□ -1.75
CPNE3-208ENST00000614678 AGPAT2O15120 278 aa4.15□□□□□ -1.75
CPNE3-208ENST00000614678 CA1P00915 261 aaPredicted RBP4.15□□□□□ -1.75
CPNE3-208ENST00000614678 OR5G3P0C626 314 aa4.15□□□□□ -1.75
CPNE3-208ENST00000614678 GPX4P36969 197 aaPredicted RBP4.15□□□□□ -1.75
CPNE3-208ENST00000614678 RAB11AP62491 216 aa4.15□□□□□ -1.75
CPNE3-208ENST00000614678 Q6ZQT7 251 aa4.15□□□□□ -1.75
CPNE3-208ENST00000614678 TRAV25A0A0B4J276 109 aa4.15□□□□□ -1.75
CPNE3-208ENST00000614678 OXA1LQ15070 435 aa4.15□□□□□ -1.75
CPNE3-208ENST00000614678 MZT2BQ6NZ67 158 aa4.15□□□□□ -1.75
CPNE3-208ENST00000614678 CYP2G1PQ6ZSU1 146 aa4.15□□□□□ -1.75
CPNE3-208ENST00000614678 PPP1R1CQ8WVI7 109 aa4.15□□□□□ -1.75
CPNE3-208ENST00000614678 ATP6V0BQ99437 205 aa4.15□□□□□ -1.75
CPNE3-208ENST00000614678 TRGV9Q99603 122 aa4.15□□□□□ -1.75
CPNE3-208ENST00000614678 SLC25A39Q9BZJ4 359 aaPredicted RBP4.15□□□□□ -1.75
CPNE3-208ENST00000614678 ZMAT5Q9UDW3 170 aaKnown RBP4.15□□□□□ -1.75
CPNE3-208ENST00000614678 PRAC2D3DTV9 90 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 FCN2Q15485 313 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 ETFRF1Q6IPR1 90 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 TMEM144Q7Z5S9 345 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 OR8I2Q8N0Y5 310 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 OR10P1Q8NGE3 313 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 WFDC1Q9HC57 220 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms