RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 MINOS1-NBL1R4GNA1 71 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 EFNA4P52798 201 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 C5orf64Q2M2E5 130 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 C3orf36Q3SXR2 165 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 RASL11AQ6T310 242 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 HAX1O00165 279 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 GZMBP10144 247 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 LEPP41159 167 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 PYY3Q5JQD4 70 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 PSMG4Q5JS54 123 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 C10orf91Q5T1B1 145 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 DMRTA1Q5VZB9 504 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 TMEM14BQ9NUH8 114 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 ZNRD1Q9P1U0 126 aa11.22□□□□□ -0.61
GGA3-220ENST00000613421 M0R1W7 72 aa11.21□□□□□ -0.61
GGA3-220ENST00000613421 SMIM13P0DJ93 91 aa11.21□□□□□ -0.61
GGA3-220ENST00000613421 DTX1Q86Y01 620 aa11.21□□□□□ -0.61
GGA3-220ENST00000613421 TMEM256Q8N2U0 113 aa11.21□□□□□ -0.61
GGA3-220ENST00000613421 NBASA2RRP1 2371 aa11.21□□□□□ -0.61
GGA3-220ENST00000613421 E7EQL1 145 aa11.21□□□□□ -0.61
GGA3-220ENST00000613421 H7C1H1 209 aa11.21□□□□□ -0.61
GGA3-220ENST00000613421 HBDP02042 147 aa11.21□□□□□ -0.61
GGA3-220ENST00000613421 C15orf32Q32M92 178 aa11.21□□□□□ -0.61
GGA3-220ENST00000613421 Q8TCH9 128 aa11.21□□□□□ -0.61
GGA3-220ENST00000613421 LTBP2Q14767 1821 aa11.21□□□□□ -0.62
GGA3-220ENST00000613421 TRAV40A0A0B4J280 105 aa11.21□□□□□ -0.62
GGA3-220ENST00000613421 CRXO43186 299 aaPredicted RBP11.21□□□□□ -0.62
GGA3-220ENST00000613421 PRB4P10163 310 aaPredicted RBP11.21□□□□□ -0.62
GGA3-220ENST00000613421 COL8A2P25067 703 aa11.21□□□□□ -0.62
GGA3-220ENST00000613421 KLF17Q5JT82 389 aaPredicted RBP11.21□□□□□ -0.62
GGA3-220ENST00000613421 NCOR1P1Q9H4R4 102 aa11.21□□□□□ -0.62
GGA3-220ENST00000613421 PRSS2P07478 247 aa11.21□□□□□ -0.62
GGA3-220ENST00000613421 COX6CP09669 75 aa11.21□□□□□ -0.62
GGA3-220ENST00000613421 DIDO1Q9BTC0 2240 aaKnown RBP11.2□□□□□ -0.62
GGA3-220ENST00000613421 PPBPP02775 128 aa11.2□□□□□ -0.62
GGA3-220ENST00000613421 PAX8Q06710 450 aa11.2□□□□□ -0.62
GGA3-220ENST00000613421 IGFL3Q6UXB1 125 aa11.2□□□□□ -0.62
GGA3-220ENST00000613421 IGLV1-44P01699 117 aa11.2□□□□□ -0.62
GGA3-220ENST00000613421 TMEM170BQ5T4T1 132 aa11.2□□□□□ -0.62
GGA3-220ENST00000613421 ST6GALNAC3Q8NDV1 305 aa11.2□□□□□ -0.62
GGA3-220ENST00000613421 IGKV2-40A0A087WW87 121 aaPredicted RBP11.2□□□□□ -0.62
GGA3-220ENST00000613421 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.2□□□□□ -0.62
GGA3-220ENST00000613421 IGKV2D-40P01614 121 aaPredicted RBP11.2□□□□□ -0.62
GGA3-220ENST00000613421 RPL15P61313 204 aaKnown RBP11.2□□□□□ -0.62
GGA3-220ENST00000613421 C2orf16Q68DN1 1984 aa11.2□□□□□ -0.62
GGA3-220ENST00000613421 ZNF726P1Q15940 193 aa11.2□□□□□ -0.62
GGA3-220ENST00000613421 TTC9CQ8N5M4 171 aa11.2□□□□□ -0.62
GGA3-220ENST00000613421 Q8NFD4 153 aa11.2□□□□□ -0.62
GGA3-220ENST00000613421 MOB4Q9Y3A3 225 aa11.2□□□□□ -0.62
GGA3-220ENST00000613421 TRAV41A0A0B4J266 112 aa11.19□□□□□ -0.62
GGA3-220ENST00000613421 NPIPB5A8MRT5 1133 aa11.19□□□□□ -0.62
GGA3-220ENST00000613421 PPIFP30405 207 aaKnown RBP11.19□□□□□ -0.62
GGA3-220ENST00000613421 NPFFO15130 113 aa11.19□□□□□ -0.62
GGA3-220ENST00000613421 NUP35Q8NFH5 326 aa11.19□□□□□ -0.62
GGA3-220ENST00000613421 GLMPQ8WWB7 406 aa11.19□□□□□ -0.62
GGA3-220ENST00000613421 LINC00527Q9UJ94 153 aa11.19□□□□□ -0.62
GGA3-220ENST00000613421 TRAV21A0A0B4J279 112 aa11.19□□□□□ -0.62
GGA3-220ENST00000613421 A0A1W2PPI3 338 aa11.19□□□□□ -0.62
GGA3-220ENST00000613421 C17orf58Q2M2W7 97 aa11.19□□□□□ -0.62
GGA3-220ENST00000613421 NXT2Q9NPJ8 142 aaKnown RBP11.19□□□□□ -0.62
GGA3-220ENST00000613421 VDAC2P45880 294 aaPredicted RBP11.19□□□□□ -0.62
GGA3-220ENST00000613421 SSC4DQ8WTU2 575 aa11.19□□□□□ -0.62
GGA3-220ENST00000613421 GEMIN7Q9H840 131 aaKnown RBP11.19□□□□□ -0.62
GGA3-220ENST00000613421 C15orf65H3BRN8 121 aa11.18□□□□□ -0.62
GGA3-220ENST00000613421 FBLN7Q53RD9 439 aa11.18□□□□□ -0.62
GGA3-220ENST00000613421 ZNF329Q86UD4 541 aa11.18□□□□□ -0.62
GGA3-220ENST00000613421 OBSL1O75147 1896 aa11.18□□□□□ -0.62
GGA3-220ENST00000613421 SIGLEC15Q6ZMC9 328 aa11.18□□□□□ -0.62
GGA3-220ENST00000613421 LYPD6Q86Y78 171 aa11.18□□□□□ -0.62
GGA3-220ENST00000613421 TNFRSF18Q9Y5U5 241 aa11.18□□□□□ -0.62
GGA3-220ENST00000613421 YLPM1P49750 1951 aaKnown RBP11.18□□□□□ -0.62
GGA3-220ENST00000613421 F2Z2F3 143 aa11.18□□□□□ -0.62
GGA3-220ENST00000613421 TMEM155Q4W5P6 130 aa11.18□□□□□ -0.62
GGA3-220ENST00000613421 DUX4L9Q6RFH8 374 aaPredicted RBP11.18□□□□□ -0.62
GGA3-220ENST00000613421 SMAD7O15105 426 aaKnown RBP11.18□□□□□ -0.62
GGA3-220ENST00000613421 CACNG7P62955 275 aa11.18□□□□□ -0.62
GGA3-220ENST00000613421 LY6HO94772 140 aa11.17□□□□□ -0.62
GGA3-220ENST00000613421 CEACAM8P31997 349 aaPredicted RBP11.17□□□□□ -0.62
GGA3-220ENST00000613421 NPFFR1Q9GZQ6 430 aa11.17□□□□□ -0.62
GGA3-220ENST00000613421 FAM181BA6NEQ2 426 aa11.17□□□□□ -0.62
GGA3-220ENST00000613421 DUX3Q96PT4 197 aa11.17□□□□□ -0.62
GGA3-220ENST00000613421 EP400Q96L91 3159 aa11.17□□□□□ -0.62
GGA3-220ENST00000613421 PFN1P07737 140 aaKnown RBP11.17□□□□□ -0.62
GGA3-220ENST00000613421 ZNF833PQ6ZTB9 187 aa11.17□□□□□ -0.62
GGA3-220ENST00000613421 HAPLN4Q86UW8 402 aa11.17□□□□□ -0.62
GGA3-220ENST00000613421 TMEM219Q86XT9 240 aa11.17□□□□□ -0.62
GGA3-220ENST00000613421 ARL6IP6Q8N6S5 226 aa11.17□□□□□ -0.62
GGA3-220ENST00000613421 NDUFA4L2Q9NRX3 87 aa11.17□□□□□ -0.62
GGA3-220ENST00000613421 COL4A4P53420 1690 aaPredicted RBP11.16□□□□□ -0.62
GGA3-220ENST00000613421 CD7P09564 240 aa11.16□□□□□ -0.62
GGA3-220ENST00000613421 CFHR2P36980 270 aa11.16□□□□□ -0.62
GGA3-220ENST00000613421 CIRBPQ14011 172 aaKnown RBP11.16□□□□□ -0.62
GGA3-220ENST00000613421 PRR30Q53SZ7 412 aaPredicted RBP11.16□□□□□ -0.62
GGA3-220ENST00000613421 PRR31Q5SQ13 230 aa11.16□□□□□ -0.62
GGA3-220ENST00000613421 C1orf194Q5T5A4 169 aa11.16□□□□□ -0.62
GGA3-220ENST00000613421 OR4X2Q8NGF9 303 aa11.16□□□□□ -0.62
GGA3-220ENST00000613421 TRAV8-1A0A0A6YYK1 113 aa11.16□□□□□ -0.62
GGA3-220ENST00000613421 NUTF2P61970 127 aaKnown RBP11.16□□□□□ -0.62
GGA3-220ENST00000613421 SRSF8Q9BRL6 282 aaKnown RBP11.16□□□□□ -0.62
GGA3-220ENST00000613421 OVOL1O14753 267 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms