RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 RAP2BP61225 183 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 TMEM217Q8N7C4 229 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 OR11H4Q8NGC9 324 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 OR2T35Q8NGX2 323 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 PBDC1Q9BVG4 233 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 GGACTQ9BVM4 153 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 TMEM231Q9H6L2 316 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 RABAC1Q9UI14 185 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 TGP01266 2768 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 OR11H12B2RN74 326 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 BUB3O43684 328 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 CD5P06127 495 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 SULT1A1P50225 295 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 LYZP61626 148 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 SLC38A11Q08AI6 406 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 DEFB125Q8N687 156 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 STPG3Q8N7X2 389 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 GLMPQ8WWB7 406 aa8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 NARS2Q96I59 477 aaKnown RBP8.45□□□□□ -1.06
CCL3L3-201ENST00000612839 OR4C46A6NHA9 309 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 E5RGE8 158 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 MPC2O95563 127 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 CFDP00746 253 aaPredicted RBP8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 RLN2P04090 185 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 TFPI2P48307 235 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 RPL11P62913 178 aaKnown RBP8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 ODF3L2Q3SX64 289 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 TEPPQ6URK8 271 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 C16orf54Q6UWD8 224 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 CYP2G1PQ6ZSU1 146 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 STX12Q86Y82 276 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 SBSPONQ8IVN8 264 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 GBGT1Q8N5D6 347 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 ASB13Q8WXK3 278 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 GRAMD2BQ96HH9 432 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 KRTAP4-12Q9BQ66 201 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 RNF126Q9BV68 326 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 MS4A6AQ9H2W1 248 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 UBQLN2Q9UHD9 624 aa8.44□□□□□ -1.06
CCL3L3-201ENST00000612839 COL7A1Q02388 2944 aa8.43□□□□□ -1.06
CCL3L3-201ENST00000612839 H2AFB1P0C5Y9 115 aa8.43□□□□□ -1.06
CCL3L3-201ENST00000612839 S100A11P31949 105 aa8.43□□□□□ -1.06
CCL3L3-201ENST00000612839 EWSR1Q01844 656 aaKnown RBP eCLIP8.43□□□□□ -1.06
CCL3L3-201ENST00000612839 NHLH2Q02577 135 aa8.43□□□□□ -1.06
CCL3L3-201ENST00000612839 VWC2Q2TAL6 325 aa8.43□□□□□ -1.06
CCL3L3-201ENST00000612839 LINC00322Q6ZN03 302 aaPredicted RBP8.43□□□□□ -1.06
CCL3L3-201ENST00000612839 BPIFCQ8NFQ6 507 aa8.43□□□□□ -1.06
CCL3L3-201ENST00000612839 HYLS1Q96M11 299 aa8.43□□□□□ -1.06
CCL3L3-201ENST00000612839 CITED4Q96RK1 184 aa8.43□□□□□ -1.06
CCL3L3-201ENST00000612839 ASCL2Q99929 193 aa8.43□□□□□ -1.06
CCL3L3-201ENST00000612839 ORM2P19652 201 aa8.42□□□□□ -1.06
CCL3L3-201ENST00000612839 SELENOTP62341 195 aa8.42□□□□□ -1.06
CCL3L3-201ENST00000612839 PAFAH1B2P68402 229 aa8.42□□□□□ -1.06
CCL3L3-201ENST00000612839 HBG1P69891 147 aa8.42□□□□□ -1.06
CCL3L3-201ENST00000612839 HBG2P69892 147 aa8.42□□□□□ -1.06
CCL3L3-201ENST00000612839 LCE3BQ5TA77 95 aa8.42□□□□□ -1.06
CCL3L3-201ENST00000612839 WFDC3Q8IUB2 231 aa8.42□□□□□ -1.06
CCL3L3-201ENST00000612839 MGST2Q99735 147 aa8.42□□□□□ -1.06
CCL3L3-201ENST00000612839 FAM110AQ9BQ89 295 aa8.42□□□□□ -1.06
CCL3L3-201ENST00000612839 TUBA4BQ9H853 241 aa8.42□□□□□ -1.06
CCL3L3-201ENST00000612839 SRD5A3Q9H8P0 318 aa8.42□□□□□ -1.06
CCL3L3-201ENST00000612839 UQCC1Q9NVA1 299 aa8.42□□□□□ -1.06
CCL3L3-201ENST00000612839 TRAV2A0A0B4J234 112 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 RBMY1BA6NDE4 496 aaKnown RBP8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 RBMY1EA6NEQ0 496 aaKnown RBP8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 HELTA6NFD8 242 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 AGPAT2O15120 278 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 RBMY1DP0C7P1 496 aaKnown RBP8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 LINC00869P0C866 280 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 PET100P0DJ07 73 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 PLP1P60201 277 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 SIGLEC15Q6ZMC9 328 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 C9orf62Q8N4C0 152 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 FAM24BQ8N5W8 94 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 STXBP6Q8NFX7 210 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 OR5C1Q8NGR4 320 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 OR1B1Q8NGR6 318 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 DCANP1Q8TF63 244 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 TMEM147Q9BVK8 224 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 SLC25A31Q9H0C2 315 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 MBD2Q9UBB5 411 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 SLC45A2Q9UMX9 530 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 WDR83OSQ9Y284 106 aa8.41□□□□□ -1.06
CCL3L3-201ENST00000612839 UBE2L5PA0A1B0GUS4 154 aa8.4□□□□□ -1.06
CCL3L3-201ENST00000612839 K7EQG2 157 aa8.4□□□□□ -1.06
CCL3L3-201ENST00000612839 DNASE2O00115 360 aaPredicted RBP8.4□□□□□ -1.06
CCL3L3-201ENST00000612839 NHLRC4P0CG21 123 aaPredicted RBP8.4□□□□□ -1.06
CCL3L3-201ENST00000612839 LYL1P12980 280 aa8.4□□□□□ -1.06
CCL3L3-201ENST00000612839 NUP62P37198 522 aaPredicted RBP8.4□□□□□ -1.06
CCL3L3-201ENST00000612839 AP2S1P53680 142 aaPredicted RBP8.4□□□□□ -1.06
CCL3L3-201ENST00000612839 BAXQ07812 192 aa8.4□□□□□ -1.06
CCL3L3-201ENST00000612839 ZNF124Q15973 351 aa8.4□□□□□ -1.06
CCL3L3-201ENST00000612839 ATP6V1FQ16864 119 aa8.4□□□□□ -1.06
CCL3L3-201ENST00000612839 C1orf194Q5T5A4 169 aa8.4□□□□□ -1.06
CCL3L3-201ENST00000612839 ZNF546Q86UE3 836 aa8.4□□□□□ -1.06
CCL3L3-201ENST00000612839 APRG1Q8IVJ8 170 aa8.4□□□□□ -1.06
CCL3L3-201ENST00000612839 MAP6D1Q9H9H5 199 aa8.4□□□□□ -1.06
CCL3L3-201ENST00000612839 DOK5Q9P104 306 aa8.4□□□□□ -1.06
CCL3L3-201ENST00000612839 PFDN2Q9UHV9 154 aa8.4□□□□□ -1.06
CCL3L3-201ENST00000612839 HUWE1Q7Z6Z7 4374 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms