RNA–Protein interactions for RNA: ENST00000612798.4

LSP1-217, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-217ENST00000612798 FOXE3Q13461 319 aa13.2□□□□□ -0.3
LSP1-217ENST00000612798 TCTEX1D4Q5JR98 221 aa13.2□□□□□ -0.3
LSP1-217ENST00000612798 C18orf65Q6ZTR6 163 aa13.2□□□□□ -0.3
LSP1-217ENST00000612798 OR5AU1Q8NGC0 362 aa13.2□□□□□ -0.3
LSP1-217ENST00000612798 LINC01006Q8NI28 216 aa13.2□□□□□ -0.3
LSP1-217ENST00000612798 JMJD8Q96S16 334 aa13.2□□□□□ -0.3
LSP1-217ENST00000612798 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.19□□□□□ -0.3
LSP1-217ENST00000612798 HYPMO75409 117 aa13.19□□□□□ -0.3
LSP1-217ENST00000612798 USF2Q15853 346 aaPredicted RBP13.19□□□□□ -0.3
LSP1-217ENST00000612798 IQCF2Q8IXL9 164 aa13.19□□□□□ -0.3
LSP1-217ENST00000612798 FUT9Q9Y231 359 aa13.19□□□□□ -0.3
LSP1-217ENST00000612798 A0A0G2JLM5 398 aa13.19□□□□□ -0.3
LSP1-217ENST00000612798 WI2-2373I1.2A0A1W2PRP0 233 aa13.19□□□□□ -0.3
LSP1-217ENST00000612798 ELANEP08246 267 aa13.19□□□□□ -0.3
LSP1-217ENST00000612798 ARL3P36405 182 aa13.19□□□□□ -0.3
LSP1-217ENST00000612798 PLP1P60201 277 aa13.19□□□□□ -0.3
LSP1-217ENST00000612798 LEMD1Q68G75 181 aa13.19□□□□□ -0.3
LSP1-217ENST00000612798 ZNF343Q6P1L6 599 aa13.19□□□□□ -0.3
LSP1-217ENST00000612798 LINC00305Q7Z4B0 112 aa13.19□□□□□ -0.3
LSP1-217ENST00000612798 C11orf44Q8N8P7 122 aa13.19□□□□□ -0.3
LSP1-217ENST00000612798 OR1L4Q8NGR5 311 aa13.19□□□□□ -0.3
LSP1-217ENST00000612798 Q8WTZ3 238 aa13.19□□□□□ -0.3
LSP1-217ENST00000612798 GATAD1Q8WUU5 269 aa13.19□□□□□ -0.3
LSP1-217ENST00000612798 RNF125Q96EQ8 232 aa13.19□□□□□ -0.3
LSP1-217ENST00000612798 TMEM89A2RUT3 159 aa13.18□□□□□ -0.3
LSP1-217ENST00000612798 HAX1O00165 279 aa13.18□□□□□ -0.3
LSP1-217ENST00000612798 OR2C1O95371 312 aa13.18□□□□□ -0.3
LSP1-217ENST00000612798 ARL14EPLP0DKL9 152 aa13.18□□□□□ -0.3
LSP1-217ENST00000612798 TOMM20LQ6UXN7 152 aa13.18□□□□□ -0.3
LSP1-217ENST00000612798 TRAV1-1A0A0B4J248 108 aa13.17□□□□□ -0.3
LSP1-217ENST00000612798 FABP1P07148 127 aa13.17□□□□□ -0.3
LSP1-217ENST00000612798 SNRPCP09234 159 aaKnown RBP13.17□□□□□ -0.3
LSP1-217ENST00000612798 STAG3L2P0CL84 134 aa13.17□□□□□ -0.3
LSP1-217ENST00000612798 STAG3L3P0CL85 134 aa13.17□□□□□ -0.3
LSP1-217ENST00000612798 RPL15P61313 204 aaKnown RBP13.17□□□□□ -0.3
LSP1-217ENST00000612798 ZNF600Q6ZNG1 722 aa13.17□□□□□ -0.3
LSP1-217ENST00000612798 MYOZ3Q8TDC0 251 aa13.17□□□□□ -0.3
LSP1-217ENST00000612798 ZNF503Q96F45 646 aa13.17□□□□□ -0.3
LSP1-217ENST00000612798 PFDN5Q99471 154 aa13.17□□□□□ -0.3
LSP1-217ENST00000612798 RARRES2Q99969 163 aa13.17□□□□□ -0.3
LSP1-217ENST00000612798 C16orf95Q9H693 158 aa13.17□□□□□ -0.3
LSP1-217ENST00000612798 MRPL27Q9P0M9 148 aaKnown RBP13.17□□□□□ -0.3
LSP1-217ENST00000612798 HIGD1AQ9Y241 93 aa13.17□□□□□ -0.3
LSP1-217ENST00000612798 BMPR1BO00238 502 aa13.16□□□□□ -0.3
LSP1-217ENST00000612798 ZNF207O43670 478 aaKnown RBP13.16□□□□□ -0.3
LSP1-217ENST00000612798 HAGHQ16775 308 aa13.16□□□□□ -0.3
LSP1-217ENST00000612798 RNF152Q8N8N0 203 aa13.16□□□□□ -0.3
LSP1-217ENST00000612798 FAM167A-AS1Q96KT0 104 aa13.16□□□□□ -0.3
LSP1-217ENST00000612798 SLC25A2Q9BXI2 301 aa13.16□□□□□ -0.3
LSP1-217ENST00000612798 ZFAND3Q9H8U3 227 aa13.16□□□□□ -0.3
LSP1-217ENST00000612798 GAR1Q9NY12 217 aaKnown RBP13.16□□□□□ -0.3
LSP1-217ENST00000612798 GNG13Q9P2W3 67 aa13.16□□□□□ -0.3
LSP1-217ENST00000612798 ELOA3CA0A087WX78 387 aaPredicted RBP13.16□□□□□ -0.3
LSP1-217ENST00000612798 HBE1P02100 147 aa13.16□□□□□ -0.3
LSP1-217ENST00000612798 WIPF2Q8TF74 440 aaPredicted RBP13.16□□□□□ -0.3
LSP1-217ENST00000612798 SLC25A39Q9BZJ4 359 aaPredicted RBP13.16□□□□□ -0.3
LSP1-217ENST00000612798 SLC35B3Q9H1N7 401 aa13.16□□□□□ -0.3
LSP1-217ENST00000612798 SMDT1Q9H4I9 107 aa13.16□□□□□ -0.3
LSP1-217ENST00000612798 C19orf24Q9BVV8 132 aa13.15□□□□□ -0.3
LSP1-217ENST00000612798 PEF1Q9UBV8 284 aaKnown RBP13.15□□□□□ -0.3
LSP1-217ENST00000612798 SCGB2A1O75556 95 aa13.14□□□□□ -0.31
LSP1-217ENST00000612798 OR10J4P0C629 311 aa13.14□□□□□ -0.31
LSP1-217ENST00000612798 C8orf88P0DMB2 117 aa13.14□□□□□ -0.31
LSP1-217ENST00000612798 PYYP10082 97 aa13.14□□□□□ -0.31
LSP1-217ENST00000612798 CD28P10747 220 aa13.14□□□□□ -0.31
LSP1-217ENST00000612798 FLI1Q01543 452 aaPredicted RBP13.14□□□□□ -0.31
LSP1-217ENST00000612798 KHDC1LQ5JSQ8 128 aa13.14□□□□□ -0.31
LSP1-217ENST00000612798 UNQ9165/PRO28630Q6UXU0 137 aa13.14□□□□□ -0.31
LSP1-217ENST00000612798 MRPL32Q9BYC8 188 aaKnown RBP13.14□□□□□ -0.31
LSP1-217ENST00000612798 SMCO4Q9NRQ5 59 aa13.14□□□□□ -0.31
LSP1-217ENST00000612798 TECRQ9NZ01 308 aaKnown RBP13.14□□□□□ -0.31
LSP1-217ENST00000612798 OR7C2O60412 319 aa13.14□□□□□ -0.31
LSP1-217ENST00000612798 HSPB1P04792 205 aaKnown RBP13.14□□□□□ -0.31
LSP1-217ENST00000612798 DEFB136Q30KP8 78 aa13.14□□□□□ -0.31
LSP1-217ENST00000612798 C20orf24Q9BUV8 137 aa13.14□□□□□ -0.31
LSP1-217ENST00000612798 IGHV3-49A0A0A0MS15 119 aa13.13□□□□□ -0.31
LSP1-217ENST00000612798 CLPSL1A2RUU4 121 aa13.13□□□□□ -0.31
LSP1-217ENST00000612798 RBFOX3A6NFN3 312 aa13.13□□□□□ -0.31
LSP1-217ENST00000612798 NDUFA7O95182 113 aa13.13□□□□□ -0.31
LSP1-217ENST00000612798 CXorf1O96002 111 aa13.13□□□□□ -0.31
LSP1-217ENST00000612798 GCHFRP30047 84 aa13.13□□□□□ -0.31
LSP1-217ENST00000612798 UBE2G2P60604 165 aa13.13□□□□□ -0.31
LSP1-217ENST00000612798 RELQ04864 619 aaPredicted RBP13.13□□□□□ -0.31
LSP1-217ENST00000612798 UBE2E2Q96LR5 201 aa13.13□□□□□ -0.31
LSP1-217ENST00000612798 ATP6V0BQ99437 205 aa13.13□□□□□ -0.31
LSP1-217ENST00000612798 RNF2Q99496 336 aa13.13□□□□□ -0.31
LSP1-217ENST00000612798 RNF114Q9Y508 228 aa13.13□□□□□ -0.31
LSP1-217ENST00000612798 IGHV3OR16-13A0A075B7E8 117 aa13.12□□□□□ -0.31
LSP1-217ENST00000612798 IGHV3-74A0A0B4J1X5 117 aa13.12□□□□□ -0.31
LSP1-217ENST00000612798 LGALS1P09382 135 aaKnown RBP13.12□□□□□ -0.31
LSP1-217ENST00000612798 RPS10P5Q9NQ39 176 aa13.12□□□□□ -0.31
LSP1-217ENST00000612798 MLXQ9UH92 298 aa13.12□□□□□ -0.31
LSP1-217ENST00000612798 IGHV4OR15-8A0A075B7B6 117 aa13.12□□□□□ -0.31
LSP1-217ENST00000612798 A0A087WW49 117 aa13.12□□□□□ -0.31
LSP1-217ENST00000612798 IGHV3-66A0A0C4DH42 116 aa13.12□□□□□ -0.31
LSP1-217ENST00000612798 H3BRN7 92 aa13.12□□□□□ -0.31
LSP1-217ENST00000612798 APOHP02749 345 aaPredicted RBP13.12□□□□□ -0.31
LSP1-217ENST00000612798 KHDC3LQ587J8 217 aa13.12□□□□□ -0.31
LSP1-217ENST00000612798 DUX3Q96PT4 197 aa13.12□□□□□ -0.31
LSP1-217ENST00000612798 SHANK2-AS3Q9BTD1 123 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms