RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 P0DMU3 169 aa12.74□□□□□ -0.37
SSBP1-215ENST00000612337 FAM231AP0DMU4 169 aa12.74□□□□□ -0.37
SSBP1-215ENST00000612337 FAM231CP0DMU5 169 aa12.74□□□□□ -0.37
SSBP1-215ENST00000612337 PSMB3P49720 205 aa12.74□□□□□ -0.37
SSBP1-215ENST00000612337 DEFB1P60022 68 aa12.74□□□□□ -0.37
SSBP1-215ENST00000612337 TOMM5Q8N4H5 51 aa12.74□□□□□ -0.37
SSBP1-215ENST00000612337 CLUHP3Q96NS8 147 aa12.74□□□□□ -0.37
SSBP1-215ENST00000612337 NDUFAF3Q9BU61 184 aa12.74□□□□□ -0.37
SSBP1-215ENST00000612337 DUXBA0A1W2PPF3 345 aa12.73□□□□□ -0.37
SSBP1-215ENST00000612337 TMEM189A5PLL7 270 aa12.73□□□□□ -0.37
SSBP1-215ENST00000612337 SMIM9A6NGZ8 99 aa12.73□□□□□ -0.37
SSBP1-215ENST00000612337 SNRPGP15A8MWD9 76 aa12.73□□□□□ -0.37
SSBP1-215ENST00000612337 SOCS3O14543 225 aa12.73□□□□□ -0.37
SSBP1-215ENST00000612337 PITX3O75364 302 aa12.73□□□□□ -0.37
SSBP1-215ENST00000612337 IGKV3-20P01619 116 aa12.73□□□□□ -0.37
SSBP1-215ENST00000612337 LYZP61626 148 aa12.73□□□□□ -0.37
SSBP1-215ENST00000612337 LINC00336Q6ZUF6 198 aa12.73□□□□□ -0.37
SSBP1-215ENST00000612337 POM121L12Q8N7R1 296 aa12.73□□□□□ -0.37
SSBP1-215ENST00000612337 DEDD2Q8WXF8 326 aa12.73□□□□□ -0.37
SSBP1-215ENST00000612337 SCRT1Q9BWW7 348 aa12.73□□□□□ -0.37
SSBP1-215ENST00000612337 RYR1P21817 5038 aa12.73□□□□□ -0.37
SSBP1-215ENST00000612337 SPART-AS1P0CW21 52 aa12.72□□□□□ -0.37
SSBP1-215ENST00000612337 RAB11AP62491 216 aa12.72□□□□□ -0.37
SSBP1-215ENST00000612337 SPATA31B1PQ5VZV4 182 aa12.72□□□□□ -0.37
SSBP1-215ENST00000612337 ZNF709Q8N972 641 aa12.72□□□□□ -0.37
SSBP1-215ENST00000612337 COQ8AQ8NI60 647 aa12.72□□□□□ -0.37
SSBP1-215ENST00000612337 TRGV9Q99603 122 aa12.72□□□□□ -0.37
SSBP1-215ENST00000612337 FXYD7P58549 80 aa12.71□□□□□ -0.37
SSBP1-215ENST00000612337 TMEM128Q5BJH2 165 aa12.71□□□□□ -0.37
SSBP1-215ENST00000612337 SPANXN2Q5MJ10 180 aa12.71□□□□□ -0.37
SSBP1-215ENST00000612337 THAP8Q8NA92 274 aa12.71□□□□□ -0.37
SSBP1-215ENST00000612337 RFNGQ9Y644 331 aa12.71□□□□□ -0.37
SSBP1-215ENST00000612337 IGHV3OR16-12A0A075B7B8 117 aa12.7□□□□□ -0.38
SSBP1-215ENST00000612337 IGKV1OR2-108A0A075B7D4 117 aa12.7□□□□□ -0.38
SSBP1-215ENST00000612337 ISLRO14498 428 aa12.7□□□□□ -0.38
SSBP1-215ENST00000612337 IAPPP10997 89 aa12.7□□□□□ -0.38
SSBP1-215ENST00000612337 SLC25A6P12236 298 aa12.7□□□□□ -0.38
SSBP1-215ENST00000612337 EMP1P54849 157 aa12.7□□□□□ -0.38
SSBP1-215ENST00000612337 PAX9P55771 341 aa12.7□□□□□ -0.38
SSBP1-215ENST00000612337 OR2F1Q13607 317 aa12.7□□□□□ -0.38
SSBP1-215ENST00000612337 SAMD13Q5VXD3 122 aa12.7□□□□□ -0.38
SSBP1-215ENST00000612337 TMED4Q7Z7H5 227 aa12.7□□□□□ -0.38
SSBP1-215ENST00000612337 OR8I2Q8N0Y5 310 aa12.7□□□□□ -0.38
SSBP1-215ENST00000612337 LRTM2Q8N967 370 aa12.7□□□□□ -0.38
SSBP1-215ENST00000612337 OR4B1Q8NGF8 309 aa12.7□□□□□ -0.38
SSBP1-215ENST00000612337 PPP1R14BQ96C90 147 aa12.7□□□□□ -0.38
SSBP1-215ENST00000612337 SLC25A21Q9BQT8 299 aaPredicted RBP12.7□□□□□ -0.38
SSBP1-215ENST00000612337 TEX48A0A1B0GUV7 120 aa12.69□□□□□ -0.38
SSBP1-215ENST00000612337 CFDP00746 253 aaPredicted RBP12.69□□□□□ -0.38
SSBP1-215ENST00000612337 PSG9Q00887 426 aa12.69□□□□□ -0.38
SSBP1-215ENST00000612337 SLC35B3Q9H1N7 401 aa12.69□□□□□ -0.38
SSBP1-215ENST00000612337 DKK2Q9UBU2 259 aa12.69□□□□□ -0.38
SSBP1-215ENST00000612337 MED6O75586 246 aa12.68□□□□□ -0.38
SSBP1-215ENST00000612337 MEOX2P50222 304 aa12.68□□□□□ -0.38
SSBP1-215ENST00000612337 FAM78BQ5VT40 261 aa12.68□□□□□ -0.38
SSBP1-215ENST00000612337 GGNBP1Q5YKI7 109 aa12.68□□□□□ -0.38
SSBP1-215ENST00000612337 EBLN2Q6P2I7 272 aa12.68□□□□□ -0.38
SSBP1-215ENST00000612337 FAM210BQ96KR6 192 aa12.68□□□□□ -0.38
SSBP1-215ENST00000612337 CIB3Q96Q77 187 aaPredicted RBP12.68□□□□□ -0.38
SSBP1-215ENST00000612337 SRRQ9GZT4 340 aa12.68□□□□□ -0.38
SSBP1-215ENST00000612337 PAIP2BQ9ULR5 123 aaKnown RBP12.68□□□□□ -0.38
SSBP1-215ENST00000612337 GOLT1BQ9Y3E0 138 aa12.68□□□□□ -0.38
SSBP1-215ENST00000612337 A0A0J9YX75 114 aa12.67□□□□□ -0.38
SSBP1-215ENST00000612337 A0A1B0GVY2 172 aa12.67□□□□□ -0.38
SSBP1-215ENST00000612337 F6UB75 175 aa12.67□□□□□ -0.38
SSBP1-215ENST00000612337 VAMP1P23763 118 aa12.67□□□□□ -0.38
SSBP1-215ENST00000612337 GALR1P47211 349 aa12.67□□□□□ -0.38
SSBP1-215ENST00000612337 RPP30P78346 268 aaKnown RBP12.67□□□□□ -0.38
SSBP1-215ENST00000612337 GSG1LQ6UXU4 331 aa12.67□□□□□ -0.38
SSBP1-215ENST00000612337 NIPSNAP3BQ9BS92 247 aa12.67□□□□□ -0.38
SSBP1-215ENST00000612337 RPRMQ9NS64 109 aa12.67□□□□□ -0.38
SSBP1-215ENST00000612337 SLC45A2Q9UMX9 530 aa12.67□□□□□ -0.38
SSBP1-215ENST00000612337 TMED3Q9Y3Q3 217 aa12.67□□□□□ -0.38
SSBP1-215ENST00000612337 PRSS46E5RG02 174 aa12.66□□□□□ -0.38
SSBP1-215ENST00000612337 FAM222AQ5U5X8 452 aa12.66□□□□□ -0.38
SSBP1-215ENST00000612337 C1orf158Q8N1D5 194 aa12.66□□□□□ -0.38
SSBP1-215ENST00000612337 C16orf92Q96LL3 132 aa12.66□□□□□ -0.38
SSBP1-215ENST00000612337 C20orf173Q96LM9 149 aa12.66□□□□□ -0.38
SSBP1-215ENST00000612337 SLC25A32Q9H2D1 315 aa12.66□□□□□ -0.38
SSBP1-215ENST00000612337 ZNF98A6NK75 572 aa12.65□□□□□ -0.38
SSBP1-215ENST00000612337 A8MTW9 85 aa12.65□□□□□ -0.38
SSBP1-215ENST00000612337 SYNGR2O43760 224 aa12.65□□□□□ -0.38
SSBP1-215ENST00000612337 SFT2D2O95562 160 aa12.65□□□□□ -0.38
SSBP1-215ENST00000612337 HBE1P02100 147 aa12.65□□□□□ -0.38
SSBP1-215ENST00000612337 OXA1LQ15070 435 aa12.65□□□□□ -0.38
SSBP1-215ENST00000612337 BAK1Q16611 211 aa12.65□□□□□ -0.38
SSBP1-215ENST00000612337 LGALS9BQ3B8N2 356 aa12.65□□□□□ -0.38
SSBP1-215ENST00000612337 C17orf77Q96MU5 243 aa12.65□□□□□ -0.38
SSBP1-215ENST00000612337 C7orf50Q9BRJ6 194 aaKnown RBP12.65□□□□□ -0.38
SSBP1-215ENST00000612337 MAGT1Q9H0U3 335 aa12.65□□□□□ -0.38
SSBP1-215ENST00000612337 DOK5Q9P104 306 aa12.65□□□□□ -0.38
SSBP1-215ENST00000612337 LOC102723971A0A1B0GUV8 181 aa12.64□□□□□ -0.39
SSBP1-215ENST00000612337 M0R2N4 97 aa12.64□□□□□ -0.39
SSBP1-215ENST00000612337 WRBO00258 174 aa12.64□□□□□ -0.39
SSBP1-215ENST00000612337 RTL8CO15255 209 aa12.64□□□□□ -0.39
SSBP1-215ENST00000612337 IFNA21P01568 189 aa12.64□□□□□ -0.39
SSBP1-215ENST00000612337 PPP1R1AQ13522 171 aa12.64□□□□□ -0.39
SSBP1-215ENST00000612337 BPIFCQ8NFQ6 507 aa12.64□□□□□ -0.39
SSBP1-215ENST00000612337 OR4D5Q8NGN0 318 aa12.64□□□□□ -0.39
SSBP1-215ENST00000612337 RSG1Q9BU20 258 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms