RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 ZNF709Q8N972 641 aa16.4■□□□□ 0.22
CBWD3-207ENST00000611426 RFNGQ9Y644 331 aa16.4■□□□□ 0.22
CBWD3-207ENST00000611426 STARD9Q9P2P6 4700 aa16.4■□□□□ 0.22
CBWD3-207ENST00000611426 TRAV1-1A0A0B4J248 108 aa16.39■□□□□ 0.21
CBWD3-207ENST00000611426 RAB19A4D1S5 217 aa16.39■□□□□ 0.21
CBWD3-207ENST00000611426 C2orf70A6NJV1 201 aa16.39■□□□□ 0.21
CBWD3-207ENST00000611426 ZNF785A8K8V0 405 aa16.39■□□□□ 0.21
CBWD3-207ENST00000611426 DEFA4P12838 97 aa16.39■□□□□ 0.21
CBWD3-207ENST00000611426 HIST1H1BP16401 226 aaKnown RBP16.39■□□□□ 0.21
CBWD3-207ENST00000611426 ARL3P36405 182 aa16.39■□□□□ 0.21
CBWD3-207ENST00000611426 MFAP2P55001 183 aa16.39■□□□□ 0.21
CBWD3-207ENST00000611426 GAMTQ14353 236 aa16.39■□□□□ 0.21
CBWD3-207ENST00000611426 TMEM41BQ5BJD5 291 aa16.39■□□□□ 0.21
CBWD3-207ENST00000611426 CLEC19AQ6UXS0 136 aa16.39■□□□□ 0.21
CBWD3-207ENST00000611426 GPHB5Q86YW7 130 aa16.39■□□□□ 0.21
CBWD3-207ENST00000611426 EEF1AKMT3Q96AZ1 226 aa16.39■□□□□ 0.21
CBWD3-207ENST00000611426 MGST2Q99735 147 aa16.39■□□□□ 0.21
CBWD3-207ENST00000611426 GGTLC1Q9BX51 225 aa16.39■□□□□ 0.21
CBWD3-207ENST00000611426 FNDC4Q9H6D8 234 aaPredicted RBP16.39■□□□□ 0.21
CBWD3-207ENST00000611426 S4R3C0 116 aa16.39■□□□□ 0.21
CBWD3-207ENST00000611426 LGALS9O00182 355 aa16.38■□□□□ 0.21
CBWD3-207ENST00000611426 REG1AP05451 166 aa16.38■□□□□ 0.21
CBWD3-207ENST00000611426 RAB31Q13636 194 aa16.38■□□□□ 0.21
CBWD3-207ENST00000611426 GUCA2BQ16661 112 aa16.38■□□□□ 0.21
CBWD3-207ENST00000611426 MARC2Q969Z3 335 aa16.38■□□□□ 0.21
CBWD3-207ENST00000611426 SLC35E1Q96K37 410 aa16.38■□□□□ 0.21
CBWD3-207ENST00000611426 RPRMQ9NS64 109 aa16.38■□□□□ 0.21
CBWD3-207ENST00000611426 TECRQ9NZ01 308 aaKnown RBP16.38■□□□□ 0.21
CBWD3-207ENST00000611426 EDN2P20800 178 aa16.38■□□□□ 0.21
CBWD3-207ENST00000611426 RPL29P47914 159 aaKnown RBP16.38■□□□□ 0.21
CBWD3-207ENST00000611426 FHITP49789 147 aa16.38■□□□□ 0.21
CBWD3-207ENST00000611426 AKR1C1Q04828 323 aa16.38■□□□□ 0.21
CBWD3-207ENST00000611426 FAM213BQ8TBF2 198 aa16.38■□□□□ 0.21
CBWD3-207ENST00000611426 CCDC140Q96MF4 163 aa16.38■□□□□ 0.21
CBWD3-207ENST00000611426 ZNF320A2RRD8 509 aa16.37■□□□□ 0.21
CBWD3-207ENST00000611426 SMCO3A2RU48 225 aa16.37■□□□□ 0.21
CBWD3-207ENST00000611426 CD7P09564 240 aa16.37■□□□□ 0.21
CBWD3-207ENST00000611426 FAM106AQ4KMX7 169 aa16.37■□□□□ 0.21
CBWD3-207ENST00000611426 UQCC3Q6UW78 93 aa16.37■□□□□ 0.21
CBWD3-207ENST00000611426 THAP8Q8NA92 274 aa16.37■□□□□ 0.21
CBWD3-207ENST00000611426 TMEM116Q8NCL8 245 aa16.37■□□□□ 0.21
CBWD3-207ENST00000611426 MBD3L1Q8WWY6 194 aa16.37■□□□□ 0.21
CBWD3-207ENST00000611426 SACSQ9NZJ4 4579 aa16.37■□□□□ 0.21
CBWD3-207ENST00000611426 AGPAT2O15120 278 aa16.36■□□□□ 0.21
CBWD3-207ENST00000611426 CBLN1P23435 193 aa16.36■□□□□ 0.21
CBWD3-207ENST00000611426 PRR20EP86478 221 aa16.36■□□□□ 0.21
CBWD3-207ENST00000611426 PRR20CP86479 221 aa16.36■□□□□ 0.21
CBWD3-207ENST00000611426 PRR20DP86480 221 aa16.36■□□□□ 0.21
CBWD3-207ENST00000611426 PRR20BP86481 221 aa16.36■□□□□ 0.21
CBWD3-207ENST00000611426 PRR20AP86496 221 aa16.36■□□□□ 0.21
CBWD3-207ENST00000611426 LINC00322Q6ZN03 302 aaPredicted RBP16.36■□□□□ 0.21
CBWD3-207ENST00000611426 DEFB125Q8N687 156 aa16.36■□□□□ 0.21
CBWD3-207ENST00000611426 SLC45A2Q9UMX9 530 aa16.36■□□□□ 0.21
CBWD3-207ENST00000611426 IGLV11-55A0A075B6I3 123 aa16.35■□□□□ 0.21
CBWD3-207ENST00000611426 IGKV1OR2-108A0A075B7D4 117 aa16.35■□□□□ 0.21
CBWD3-207ENST00000611426 TRBV7-1A0A0A6YYK4 115 aa16.35■□□□□ 0.21
CBWD3-207ENST00000611426 M6PRP20645 277 aa16.35■□□□□ 0.21
CBWD3-207ENST00000611426 OR11H12B2RN74 326 aa16.34■□□□□ 0.21
CBWD3-207ENST00000611426 I3L2K1 104 aa16.34■□□□□ 0.21
CBWD3-207ENST00000611426 CYB5BO43169 146 aa16.34■□□□□ 0.21
CBWD3-207ENST00000611426 HBE1P02100 147 aa16.34■□□□□ 0.21
CBWD3-207ENST00000611426 CLEC3BP05452 202 aa16.34■□□□□ 0.21
CBWD3-207ENST00000611426 H2AFB1P0C5Y9 115 aa16.34■□□□□ 0.21
CBWD3-207ENST00000611426 ACOT6Q3I5F7 207 aaPredicted RBP16.34■□□□□ 0.21
CBWD3-207ENST00000611426 FFAR4Q5NUL3 377 aa16.34■□□□□ 0.21
CBWD3-207ENST00000611426 SPSB3Q6PJ21 355 aa16.34■□□□□ 0.21
CBWD3-207ENST00000611426 HRH4Q9H3N8 390 aa16.34■□□□□ 0.21
CBWD3-207ENST00000611426 VSIRQ9H7M9 311 aa16.34■□□□□ 0.21
CBWD3-207ENST00000611426 RETNQ9HD89 108 aa16.34■□□□□ 0.21
CBWD3-207ENST00000611426 GAR1Q9NY12 217 aaKnown RBP16.34■□□□□ 0.21
CBWD3-207ENST00000611426 SELENOKQ9Y6D0 94 aa16.34■□□□□ 0.21
CBWD3-207ENST00000611426 PMS2P11Q13670 270 aa16.33■□□□□ 0.2
CBWD3-207ENST00000611426 RPP25LQ8N5L8 163 aaKnown RBP16.33■□□□□ 0.2
CBWD3-207ENST00000611426 WFDC10AQ9H1F0 79 aa16.33■□□□□ 0.2
CBWD3-207ENST00000611426 SRD5A3Q9H8P0 318 aa16.33■□□□□ 0.2
CBWD3-207ENST00000611426 THYN1Q9P016 225 aa16.33■□□□□ 0.2
CBWD3-207ENST00000611426 PXMP4Q9Y6I8 212 aa16.33■□□□□ 0.2
CBWD3-207ENST00000611426 LCE6AA0A183 80 aa16.32■□□□□ 0.2
CBWD3-207ENST00000611426 TMEM213A2RRL7 107 aa16.32■□□□□ 0.2
CBWD3-207ENST00000611426 RBMY1BA6NDE4 496 aaKnown RBP16.32■□□□□ 0.2
CBWD3-207ENST00000611426 RBMY1EA6NEQ0 496 aaKnown RBP16.32■□□□□ 0.2
CBWD3-207ENST00000611426 YIF1AO95070 293 aa16.32■□□□□ 0.2
CBWD3-207ENST00000611426 RBMY1DP0C7P1 496 aaKnown RBP16.32■□□□□ 0.2
CBWD3-207ENST00000611426 RAB2AP61019 212 aa16.32■□□□□ 0.2
CBWD3-207ENST00000611426 ZNF726P1Q15940 193 aa16.32■□□□□ 0.2
CBWD3-207ENST00000611426 MLANAQ16655 118 aa16.32■□□□□ 0.2
CBWD3-207ENST00000611426 MISP3Q96FF7 219 aa16.32■□□□□ 0.2
CBWD3-207ENST00000611426 CTXND1A0A1B0GTU2 59 aa16.31■□□□□ 0.2
CBWD3-207ENST00000611426 A8MWP6 167 aa16.31■□□□□ 0.2
CBWD3-207ENST00000611426 TEX46H3BTG2 121 aa16.31■□□□□ 0.2
CBWD3-207ENST00000611426 K7EIM0 57 aa16.31■□□□□ 0.2
CBWD3-207ENST00000611426 MT-CO2P00403 227 aa16.31■□□□□ 0.2
CBWD3-207ENST00000611426 LINC00869P0C866 280 aa16.31■□□□□ 0.2
CBWD3-207ENST00000611426 ELLP55199 621 aaPredicted RBP16.31■□□□□ 0.2
CBWD3-207ENST00000611426 SELENOTP62341 195 aa16.31■□□□□ 0.2
CBWD3-207ENST00000611426 STPG3Q8N7X2 389 aa16.31■□□□□ 0.2
CBWD3-207ENST00000611426 OR4X1Q8NH49 305 aa16.31■□□□□ 0.2
CBWD3-207ENST00000611426 TRGV9Q99603 122 aa16.31■□□□□ 0.2
CBWD3-207ENST00000611426 FAM110AQ9BQ89 295 aa16.31■□□□□ 0.2
CBWD3-207ENST00000611426 SLC39A9Q9NUM3 307 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms