RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 SYNJ2BPP57105 145 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 SELENOTP62341 195 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 ZNF90Q03938 601 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 Q56UQ5 140 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 FAM122CQ6P4D5 195 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 OR10G4Q8NGN3 311 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 OR10G9Q8NGN4 311 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 OR10G7Q8NGN6 311 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 EEF1AKMT3Q96AZ1 226 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 USMG5Q96IX5 58 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 SLC25A22Q9H936 323 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 MED9Q9NWA0 146 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 PEF1Q9UBV8 284 aaKnown RBP8.77□□□□□ -1.01
LINC00539-204ENST00000608957 PFDN2Q9UHV9 154 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 S4R3C0 116 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 TRAV30A0A087WSZ9 112 aa8.76□□□□□ -1.01
LINC00539-204ENST00000608957 CTXND1A0A1B0GTU2 59 aa8.76□□□□□ -1.01
LINC00539-204ENST00000608957 F8W735 103 aaPredicted RBP8.76□□□□□ -1.01
LINC00539-204ENST00000608957 GNG7O60262 68 aa8.76□□□□□ -1.01
LINC00539-204ENST00000608957 IGLV1-51P01701 117 aa8.76□□□□□ -1.01
LINC00539-204ENST00000608957 IGHV3-23P01764 117 aa8.76□□□□□ -1.01
LINC00539-204ENST00000608957 FABP1P07148 127 aa8.76□□□□□ -1.01
LINC00539-204ENST00000608957 CSN3P07498 182 aa8.76□□□□□ -1.01
LINC00539-204ENST00000608957 H2AFB1P0C5Y9 115 aa8.76□□□□□ -1.01
LINC00539-204ENST00000608957 ZP3P21754 424 aa8.76□□□□□ -1.01
LINC00539-204ENST00000608957 GATA2P23769 480 aaPredicted RBP8.76□□□□□ -1.01
LINC00539-204ENST00000608957 TIGITQ495A1 244 aa8.76□□□□□ -1.01
LINC00539-204ENST00000608957 GCSAMLQ5JQS6 135 aa8.76□□□□□ -1.01
LINC00539-204ENST00000608957 COMMD7Q86VX2 200 aa8.76□□□□□ -1.01
LINC00539-204ENST00000608957 RPP25LQ8N5L8 163 aaKnown RBP8.76□□□□□ -1.01
LINC00539-204ENST00000608957 ZNF502Q8TBZ5 544 aa8.76□□□□□ -1.01
LINC00539-204ENST00000608957 TXN2Q99757 166 aa8.76□□□□□ -1.01
LINC00539-204ENST00000608957 ASCL2Q99929 193 aa8.76□□□□□ -1.01
LINC00539-204ENST00000608957 ACTR3CQ9C0K3 210 aaPredicted RBP8.76□□□□□ -1.01
LINC00539-204ENST00000608957 HRH4Q9H3N8 390 aa8.76□□□□□ -1.01
LINC00539-204ENST00000608957 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.75□□□□□ -1.01
LINC00539-204ENST00000608957 IGKV1-17P01599 117 aa8.75□□□□□ -1.01
LINC00539-204ENST00000608957 HBE1P02100 147 aa8.75□□□□□ -1.01
LINC00539-204ENST00000608957 CDC34P49427 236 aaPredicted RBP8.75□□□□□ -1.01
LINC00539-204ENST00000608957 ATP5G2Q06055 141 aa8.75□□□□□ -1.01
LINC00539-204ENST00000608957 ZNF726P1Q15940 193 aa8.75□□□□□ -1.01
LINC00539-204ENST00000608957 ADAMTSL5Q6ZMM2 481 aa8.75□□□□□ -1.01
LINC00539-204ENST00000608957 SSX7Q7RTT5 188 aa8.75□□□□□ -1.01
LINC00539-204ENST00000608957 SLC7A5P1Q8MH63 180 aa8.75□□□□□ -1.01
LINC00539-204ENST00000608957 OR9G4Q8NGQ1 327 aa8.75□□□□□ -1.01
LINC00539-204ENST00000608957 LYPD6BQ8NI32 183 aa8.75□□□□□ -1.01
LINC00539-204ENST00000608957 GAR1Q9NY12 217 aaKnown RBP8.75□□□□□ -1.01
LINC00539-204ENST00000608957 TRBV7-1A0A0A6YYK4 115 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 MAP1LC3B2A6NCE7 125 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 OR2T8A6NH00 312 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 PPP5D1E7EU14 171 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 TEX46H3BTG2 121 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 TOMM40O96008 361 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 EDN2P20800 178 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 GPR183P32249 361 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 RHOBP62745 196 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 SPSB3Q6PJ21 355 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 Q8N1Y9 231 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 OR1L4Q8NGR5 311 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 SFT2D1Q8WV19 159 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 MBD3L1Q8WWY6 194 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 CCDC140Q96MF4 163 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 ATP6V0BQ99437 205 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 PFDN5Q99471 154 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 MAP1LC3BQ9GZQ8 125 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 SMAD5-AS1Q9Y6J3 95 aa8.74□□□□□ -1.01
LINC00539-204ENST00000608957 TRAV1-1A0A0B4J248 108 aa8.73□□□□□ -1.01
LINC00539-204ENST00000608957 A0A1B0GV50 99 aa8.73□□□□□ -1.01
LINC00539-204ENST00000608957 A0A1W2PPV4 95 aa8.73□□□□□ -1.01
LINC00539-204ENST00000608957 IZUMO1RA6ND01 250 aa8.73□□□□□ -1.01
LINC00539-204ENST00000608957 NUPL2O15504 423 aaKnown RBP8.73□□□□□ -1.01
LINC00539-204ENST00000608957 COX7A2P2O60397 106 aa8.73□□□□□ -1.01
LINC00539-204ENST00000608957 OR5G3P0C626 314 aa8.73□□□□□ -1.01
LINC00539-204ENST00000608957 RD3LP0DJH9 198 aa8.73□□□□□ -1.01
LINC00539-204ENST00000608957 PSG1P11464 419 aa8.73□□□□□ -1.01
LINC00539-204ENST00000608957 PLP1P60201 277 aa8.73□□□□□ -1.01
LINC00539-204ENST00000608957 YPEL3P61236 119 aaPredicted RBP8.73□□□□□ -1.01
LINC00539-204ENST00000608957 RPEL1Q2QD12 228 aa8.73□□□□□ -1.01
LINC00539-204ENST00000608957 LCN15Q6UWW0 184 aa8.73□□□□□ -1.01
LINC00539-204ENST00000608957 SBSPONQ8IVN8 264 aa8.73□□□□□ -1.01
LINC00539-204ENST00000608957 GATAD1Q8WUU5 269 aa8.73□□□□□ -1.01
LINC00539-204ENST00000608957 RAB24Q969Q5 203 aa8.73□□□□□ -1.01
LINC00539-204ENST00000608957 RNF2Q99496 336 aa8.73□□□□□ -1.01
LINC00539-204ENST00000608957 ELOVL1Q9BW60 279 aa8.73□□□□□ -1.01
LINC00539-204ENST00000608957 MRPL32Q9BYC8 188 aaKnown RBP8.73□□□□□ -1.01
LINC00539-204ENST00000608957 DOK5Q9P104 306 aa8.73□□□□□ -1.01
LINC00539-204ENST00000608957 HMGB3O15347 200 aaKnown RBP8.72□□□□□ -1.01
LINC00539-204ENST00000608957 TGOLN2O43493 480 aa8.72□□□□□ -1.01
LINC00539-204ENST00000608957 ATP6V1G1O75348 118 aa8.72□□□□□ -1.01
LINC00539-204ENST00000608957 EIF3GO75821 320 aaKnown RBP eCLIP8.72□□□□□ -1.01
LINC00539-204ENST00000608957 LYZP61626 148 aa8.72□□□□□ -1.01
LINC00539-204ENST00000608957 FAM78BQ5VT40 261 aa8.72□□□□□ -1.01
LINC00539-204ENST00000608957 C10orf113Q5VZT2 155 aa8.72□□□□□ -1.01
LINC00539-204ENST00000608957 CLEC19AQ6UXS0 136 aa8.72□□□□□ -1.01
LINC00539-204ENST00000608957 OR51G1Q8NGK1 321 aa8.72□□□□□ -1.01
LINC00539-204ENST00000608957 OR1B1Q8NGR6 318 aa8.72□□□□□ -1.01
LINC00539-204ENST00000608957 TMEM37Q8WXS4 190 aa8.72□□□□□ -1.01
LINC00539-204ENST00000608957 MARC2Q969Z3 335 aa8.72□□□□□ -1.01
LINC00539-204ENST00000608957 SEPSECSQ9HD40 501 aaKnown RBP8.72□□□□□ -1.01
LINC00539-204ENST00000608957 SIGLEC8Q9NYZ4 499 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms