RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 STXBP6Q8NFX7 210 aa10.68□□□□□ -0.7
SSBP4-214ENST00000607020 OR1S1Q8NH92 325 aa10.68□□□□□ -0.7
SSBP4-214ENST00000607020 MITD1Q8WV92 249 aa10.68□□□□□ -0.7
SSBP4-214ENST00000607020 PITX3O75364 302 aa10.67□□□□□ -0.7
SSBP4-214ENST00000607020 ADAP1O75689 374 aa10.67□□□□□ -0.7
SSBP4-214ENST00000607020 RNASE2P10153 161 aaKnown RBP10.67□□□□□ -0.7
SSBP4-214ENST00000607020 P2RY1P47900 373 aa10.67□□□□□ -0.7
SSBP4-214ENST00000607020 SUB1P53999 127 aaKnown RBP eCLIP10.67□□□□□ -0.7
SSBP4-214ENST00000607020 FAM3BP58499 235 aaPredicted RBP10.67□□□□□ -0.7
SSBP4-214ENST00000607020 BSXQ3C1V8 233 aa10.67□□□□□ -0.7
SSBP4-214ENST00000607020 PINX1Q96BK5 328 aaKnown RBP10.67□□□□□ -0.7
SSBP4-214ENST00000607020 SEPSECSQ9HD40 501 aaKnown RBP10.67□□□□□ -0.7
SSBP4-214ENST00000607020 HEYLQ9NQ87 328 aaPredicted RBP10.67□□□□□ -0.7
SSBP4-214ENST00000607020 AGRNO00468 2067 aa10.66□□□□□ -0.7
SSBP4-214ENST00000607020 SMIM9A6NGZ8 99 aa10.66□□□□□ -0.7
SSBP4-214ENST00000607020 ZNF705AQ6ZN79 300 aaPredicted RBP10.66□□□□□ -0.7
SSBP4-214ENST00000607020 DTD1Q8TEA8 209 aa10.66□□□□□ -0.7
SSBP4-214ENST00000607020 ZNF431Q8TF32 576 aaPredicted RBP10.66□□□□□ -0.7
SSBP4-214ENST00000607020 METTL26Q96S19 204 aa10.66□□□□□ -0.7
SSBP4-214ENST00000607020 SEC22CQ9BRL7 303 aa10.66□□□□□ -0.7
SSBP4-214ENST00000607020 RBKSQ9H477 322 aa10.66□□□□□ -0.7
SSBP4-214ENST00000607020 U3KQE9 123 aa10.66□□□□□ -0.7
SSBP4-214ENST00000607020 TEX48A0A1B0GUV7 120 aa10.65□□□□□ -0.7
SSBP4-214ENST00000607020 ZNF705FA8MVS1 300 aaPredicted RBP10.65□□□□□ -0.7
SSBP4-214ENST00000607020 FAM90A26D6RGX4 464 aa10.65□□□□□ -0.7
SSBP4-214ENST00000607020 ZNF705DP0CH99 300 aaPredicted RBP10.65□□□□□ -0.7
SSBP4-214ENST00000607020 ZNF705BP0CI00 300 aaPredicted RBP10.65□□□□□ -0.7
SSBP4-214ENST00000607020 HTR2BP41595 481 aa10.65□□□□□ -0.7
SSBP4-214ENST00000607020 TNP2Q05952 138 aa10.65□□□□□ -0.7
SSBP4-214ENST00000607020 OXA1LQ15070 435 aa10.65□□□□□ -0.7
SSBP4-214ENST00000607020 XCL2Q9UBD3 114 aa10.65□□□□□ -0.7
SSBP4-214ENST00000607020 APOBP04114 4563 aaKnown RBP10.64□□□□□ -0.71
SSBP4-214ENST00000607020 H3BMM0 161 aa10.64□□□□□ -0.71
SSBP4-214ENST00000607020 CORTO00230 105 aa10.64□□□□□ -0.71
SSBP4-214ENST00000607020 IL5P05113 134 aa10.64□□□□□ -0.71
SSBP4-214ENST00000607020 EIF2B2P49770 351 aaKnown RBP10.64□□□□□ -0.71
SSBP4-214ENST00000607020 AP2S1P53680 142 aaPredicted RBP10.64□□□□□ -0.71
SSBP4-214ENST00000607020 C2orf83Q53S99 150 aa10.64□□□□□ -0.71
SSBP4-214ENST00000607020 SLC24A4Q8NFF2 622 aa10.64□□□□□ -0.71
SSBP4-214ENST00000607020 NARS2Q96I59 477 aaKnown RBP10.64□□□□□ -0.71
SSBP4-214ENST00000607020 HELTA6NFD8 242 aa10.63□□□□□ -0.71
SSBP4-214ENST00000607020 CLN5O75503 358 aa10.63□□□□□ -0.71
SSBP4-214ENST00000607020 PSMG4Q5JS54 123 aa10.63□□□□□ -0.71
SSBP4-214ENST00000607020 C12orf45Q8N5I9 185 aaPredicted RBP10.63□□□□□ -0.71
SSBP4-214ENST00000607020 OR4D5Q8NGN0 318 aa10.63□□□□□ -0.71
SSBP4-214ENST00000607020 OR4X1Q8NH49 305 aa10.63□□□□□ -0.71
SSBP4-214ENST00000607020 TMEM170AQ8WVE7 144 aa10.63□□□□□ -0.71
SSBP4-214ENST00000607020 DKK2Q9UBU2 259 aa10.63□□□□□ -0.71
SSBP4-214ENST00000607020 U3KQ87 197 aa10.63□□□□□ -0.71
SSBP4-214ENST00000607020 DNAH5Q8TE73 4624 aa10.63□□□□□ -0.71
SSBP4-214ENST00000607020 INMT-MINDY4F8WBC2 141 aa10.62□□□□□ -0.71
SSBP4-214ENST00000607020 MED6O75586 246 aa10.62□□□□□ -0.71
SSBP4-214ENST00000607020 IAH1Q2TAA2 248 aaPredicted RBP10.62□□□□□ -0.71
SSBP4-214ENST00000607020 NOXA1Q86UR1 476 aa10.62□□□□□ -0.71
SSBP4-214ENST00000607020 RNASEH2CQ8TDP1 164 aaKnown RBP10.62□□□□□ -0.71
SSBP4-214ENST00000607020 GLMPQ8WWB7 406 aa10.62□□□□□ -0.71
SSBP4-214ENST00000607020 NIPSNAP3BQ9BS92 247 aa10.62□□□□□ -0.71
SSBP4-214ENST00000607020 MARVELD1Q9BSK0 173 aa10.62□□□□□ -0.71
SSBP4-214ENST00000607020 RFNGQ9Y644 331 aa10.62□□□□□ -0.71
SSBP4-214ENST00000607020 CCSO14618 274 aa10.61□□□□□ -0.71
SSBP4-214ENST00000607020 SYNGR2O43760 224 aa10.61□□□□□ -0.71
SSBP4-214ENST00000607020 PRAF2O60831 178 aa10.61□□□□□ -0.71
SSBP4-214ENST00000607020 IGKV1-17P01599 117 aa10.61□□□□□ -0.71
SSBP4-214ENST00000607020 IAPPP10997 89 aa10.61□□□□□ -0.71
SSBP4-214ENST00000607020 OPRK1P41145 380 aa10.61□□□□□ -0.71
SSBP4-214ENST00000607020 ATP5IP56385 69 aaPredicted RBP10.61□□□□□ -0.71
SSBP4-214ENST00000607020 SNRPD3P62318 126 aaKnown RBP10.61□□□□□ -0.71
SSBP4-214ENST00000607020 ID3Q02535 119 aa10.61□□□□□ -0.71
SSBP4-214ENST00000607020 C16orf54Q6UWD8 224 aa10.61□□□□□ -0.71
SSBP4-214ENST00000607020 CIB3Q96Q77 187 aaPredicted RBP10.61□□□□□ -0.71
SSBP4-214ENST00000607020 MAGT1Q9H0U3 335 aa10.61□□□□□ -0.71
SSBP4-214ENST00000607020 FNDC4Q9H6D8 234 aaPredicted RBP10.61□□□□□ -0.71
SSBP4-214ENST00000607020 GPN1Q9HCN4 374 aaPredicted RBP10.61□□□□□ -0.71
SSBP4-214ENST00000607020 SCRT2Q9NQ03 307 aa10.61□□□□□ -0.71
SSBP4-214ENST00000607020 RPS10-NUDT3A0A1W2PQS6 291 aa10.6□□□□□ -0.71
SSBP4-214ENST00000607020 SNRPGP15A8MWD9 76 aa10.6□□□□□ -0.71
SSBP4-214ENST00000607020 SCGB2A1O75556 95 aa10.6□□□□□ -0.71
SSBP4-214ENST00000607020 PTTG1O95997 202 aa10.6□□□□□ -0.71
SSBP4-214ENST00000607020 HLA-DRB4P13762 266 aa10.6□□□□□ -0.71
SSBP4-214ENST00000607020 NKX2-1P43699 371 aaPredicted RBP10.6□□□□□ -0.71
SSBP4-214ENST00000607020 ZBTB8BQ8NAP8 495 aaPredicted RBP10.6□□□□□ -0.71
SSBP4-214ENST00000607020 CLUHP3Q96NS8 147 aa10.6□□□□□ -0.71
SSBP4-214ENST00000607020 MRPL36Q9P0J6 103 aaKnown RBP10.6□□□□□ -0.71
SSBP4-214ENST00000607020 HLA-DRB4X5D2U9 266 aa10.6□□□□□ -0.71
SSBP4-214ENST00000607020 TRAV30A0A087WSZ9 112 aa10.59□□□□□ -0.71
SSBP4-214ENST00000607020 FAM25EA8MYX2 175 aa10.59□□□□□ -0.71
SSBP4-214ENST00000607020 WRBO00258 174 aa10.59□□□□□ -0.71
SSBP4-214ENST00000607020 EMP1P54849 157 aa10.59□□□□□ -0.71
SSBP4-214ENST00000607020 POLR2GP62487 172 aaKnown RBP eCLIP10.59□□□□□ -0.71
SSBP4-214ENST00000607020 FAM222AQ5U5X8 452 aa10.59□□□□□ -0.71
SSBP4-214ENST00000607020 C6orf223Q8N319 242 aa10.59□□□□□ -0.71
SSBP4-214ENST00000607020 C15orf53Q8NAA6 179 aa10.59□□□□□ -0.71
SSBP4-214ENST00000607020 GSKIPQ9P0R6 139 aa10.59□□□□□ -0.71
SSBP4-214ENST00000607020 NBDYA0A0U1RRE5 68 aa10.58□□□□□ -0.72
SSBP4-214ENST00000607020 HNRNPCP07910 306 aaKnown RBP eCLIP10.58□□□□□ -0.72
SSBP4-214ENST00000607020 SLC25A4P12235 298 aa10.58□□□□□ -0.72
SSBP4-214ENST00000607020 MLANAQ16655 118 aa10.58□□□□□ -0.72
SSBP4-214ENST00000607020 TMEM88Q6PEY1 159 aa10.58□□□□□ -0.72
SSBP4-214ENST00000607020 NRN1Q9NPD7 142 aa10.58□□□□□ -0.72
SSBP4-214ENST00000607020 C5orf51A6NDU8 294 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms