RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 TMEM144Q7Z5S9 345 aa10.61□□□□□ -0.71
TUBE1-208ENST00000604743 NRARPQ7Z6K4 114 aa10.61□□□□□ -0.71
TUBE1-208ENST00000604743 NRN1Q9NPD7 142 aa10.61□□□□□ -0.71
TUBE1-208ENST00000604743 MGAT4CQ9UBM8 478 aa10.61□□□□□ -0.71
TUBE1-208ENST00000604743 CFDP00746 253 aaPredicted RBP10.6□□□□□ -0.71
TUBE1-208ENST00000604743 CA1P00915 261 aaPredicted RBP10.6□□□□□ -0.71
TUBE1-208ENST00000604743 DLK1P80370 383 aa10.6□□□□□ -0.71
TUBE1-208ENST00000604743 ACTL10Q5JWF8 245 aa10.6□□□□□ -0.71
TUBE1-208ENST00000604743 CYP2G1PQ6ZSU1 146 aa10.6□□□□□ -0.71
TUBE1-208ENST00000604743 OR8I2Q8N0Y5 310 aa10.6□□□□□ -0.71
TUBE1-208ENST00000604743 OR1B1Q8NGR6 318 aa10.6□□□□□ -0.71
TUBE1-208ENST00000604743 RNF183Q96D59 192 aa10.6□□□□□ -0.71
TUBE1-208ENST00000604743 SLC25A22Q9H936 323 aa10.6□□□□□ -0.71
TUBE1-208ENST00000604743 GPN1Q9HCN4 374 aaPredicted RBP10.6□□□□□ -0.71
TUBE1-208ENST00000604743 DOK5Q9P104 306 aa10.6□□□□□ -0.71
TUBE1-208ENST00000604743 FAM24AA6NFZ4 105 aa10.59□□□□□ -0.71
TUBE1-208ENST00000604743 INMT-MINDY4F8WBC2 141 aa10.59□□□□□ -0.71
TUBE1-208ENST00000604743 CAV2P51636 162 aa10.59□□□□□ -0.71
TUBE1-208ENST00000604743 DEFA1P59665 94 aa10.59□□□□□ -0.71
TUBE1-208ENST00000604743 DEFA3P59666 94 aa10.59□□□□□ -0.71
TUBE1-208ENST00000604743 SNRPD3P62318 126 aaKnown RBP10.59□□□□□ -0.71
TUBE1-208ENST00000604743 ARL16Q0P5N6 197 aa10.59□□□□□ -0.71
TUBE1-208ENST00000604743 TMEM147Q9BVK8 224 aa10.59□□□□□ -0.71
TUBE1-208ENST00000604743 NPVFQ9HCQ7 196 aa10.59□□□□□ -0.71
TUBE1-208ENST00000604743 FBXL17Q9UF56 701 aa10.59□□□□□ -0.71
TUBE1-208ENST00000604743 TP53TG1Q9Y2A0 90 aa10.59□□□□□ -0.71
TUBE1-208ENST00000604743 STARD9Q9P2P6 4700 aa10.59□□□□□ -0.71
TUBE1-208ENST00000604743 CSMD3Q7Z407 3707 aa10.58□□□□□ -0.72
TUBE1-208ENST00000604743 A0A0J9YWU9 116 aa10.58□□□□□ -0.72
TUBE1-208ENST00000604743 SIX6O95475 246 aa10.58□□□□□ -0.72
TUBE1-208ENST00000604743 PVALBP20472 110 aaPredicted RBP10.58□□□□□ -0.72
TUBE1-208ENST00000604743 SLC38A11Q08AI6 406 aa10.58□□□□□ -0.72
TUBE1-208ENST00000604743 RAB32Q13637 225 aa10.58□□□□□ -0.72
TUBE1-208ENST00000604743 C1orf194Q5T5A4 169 aa10.58□□□□□ -0.72
TUBE1-208ENST00000604743 LINC00052Q96N35 136 aa10.58□□□□□ -0.72
TUBE1-208ENST00000604743 ZNF98A6NK75 572 aa10.57□□□□□ -0.72
TUBE1-208ENST00000604743 GOSR2O14653 212 aa10.57□□□□□ -0.72
TUBE1-208ENST00000604743 CST7O76096 145 aa10.57□□□□□ -0.72
TUBE1-208ENST00000604743 OR5G3P0C626 314 aa10.57□□□□□ -0.72
TUBE1-208ENST00000604743 LINC00869P0C866 280 aa10.57□□□□□ -0.72
TUBE1-208ENST00000604743 TEPPQ6URK8 271 aa10.57□□□□□ -0.72
TUBE1-208ENST00000604743 TRPT1Q86TN4 253 aaKnown RBP10.57□□□□□ -0.72
TUBE1-208ENST00000604743 TMEM217Q8N7C4 229 aa10.57□□□□□ -0.72
TUBE1-208ENST00000604743 SLC25A32Q9H2D1 315 aa10.57□□□□□ -0.72
TUBE1-208ENST00000604743 PRAF2O60831 178 aa10.56□□□□□ -0.72
TUBE1-208ENST00000604743 DEFB1P60022 68 aa10.56□□□□□ -0.72
TUBE1-208ENST00000604743 RAP2BP61225 183 aa10.56□□□□□ -0.72
TUBE1-208ENST00000604743 IL17DQ8TAD2 202 aa10.56□□□□□ -0.72
TUBE1-208ENST00000604743 RARRES2Q99969 163 aa10.56□□□□□ -0.72
TUBE1-208ENST00000604743 HIGD1AQ9Y241 93 aa10.56□□□□□ -0.72
TUBE1-208ENST00000604743 TENM2Q9NT68 2774 aa10.56□□□□□ -0.72
TUBE1-208ENST00000604743 FNDC10F2Z333 226 aa10.55□□□□□ -0.72
TUBE1-208ENST00000604743 HYPMO75409 117 aa10.55□□□□□ -0.72
TUBE1-208ENST00000604743 DEDDO75618 318 aa10.55□□□□□ -0.72
TUBE1-208ENST00000604743 S100A7P31151 101 aa10.55□□□□□ -0.72
TUBE1-208ENST00000604743 ID1P41134 155 aa10.55□□□□□ -0.72
TUBE1-208ENST00000604743 GALR1P47211 349 aa10.55□□□□□ -0.72
TUBE1-208ENST00000604743 SELENOTP62341 195 aa10.55□□□□□ -0.72
TUBE1-208ENST00000604743 IL15RAQ13261 267 aa10.55□□□□□ -0.72
TUBE1-208ENST00000604743 OR11H2Q8NH07 326 aa10.55□□□□□ -0.72
TUBE1-208ENST00000604743 GATAD1Q8WUU5 269 aa10.55□□□□□ -0.72
TUBE1-208ENST00000604743 RSG1Q9BU20 258 aa10.55□□□□□ -0.72
TUBE1-208ENST00000604743 SCRT1Q9BWW7 348 aa10.55□□□□□ -0.72
TUBE1-208ENST00000604743 SLC25A39Q9BZJ4 359 aaPredicted RBP10.55□□□□□ -0.72
TUBE1-208ENST00000604743 ARL6Q9H0F7 186 aa10.55□□□□□ -0.72
TUBE1-208ENST00000604743 C11orf1Q9H5F2 150 aa10.55□□□□□ -0.72
TUBE1-208ENST00000604743 SEPSECSQ9HD40 501 aaKnown RBP10.55□□□□□ -0.72
TUBE1-208ENST00000604743 SLC45A2Q9UMX9 530 aa10.55□□□□□ -0.72
TUBE1-208ENST00000604743 H3BRN7 92 aa10.54□□□□□ -0.72
TUBE1-208ENST00000604743 AGPAT2O15120 278 aa10.54□□□□□ -0.72
TUBE1-208ENST00000604743 EWSR1Q01844 656 aaKnown RBP eCLIP10.54□□□□□ -0.72
TUBE1-208ENST00000604743 FGL1Q08830 312 aa10.54□□□□□ -0.72
TUBE1-208ENST00000604743 PMS2P11Q13670 270 aa10.54□□□□□ -0.72
TUBE1-208ENST00000604743 LRRC37A5PQ49AS3 106 aa10.54□□□□□ -0.72
TUBE1-208ENST00000604743 MORN3Q6PF18 240 aaPredicted RBP10.54□□□□□ -0.72
TUBE1-208ENST00000604743 C16orf92Q96LL3 132 aa10.54□□□□□ -0.72
TUBE1-208ENST00000604743 UHRF2Q96PU4 802 aa10.54□□□□□ -0.72
TUBE1-208ENST00000604743 MARVELD1Q9BSK0 173 aa10.54□□□□□ -0.72
TUBE1-208ENST00000604743 GGACTQ9BVM4 153 aa10.54□□□□□ -0.72
TUBE1-208ENST00000604743 LYRM2Q9NU23 88 aaPredicted RBP10.54□□□□□ -0.72
TUBE1-208ENST00000604743 CLEC5AQ9NY25 188 aa10.54□□□□□ -0.72
TUBE1-208ENST00000604743 DYNC2H1Q8NCM8 4307 aaKnown RBP10.54□□□□□ -0.72
TUBE1-208ENST00000604743 IGSF23A1L1A6 192 aa10.53□□□□□ -0.72
TUBE1-208ENST00000604743 SSNA1O43805 119 aa10.53□□□□□ -0.72
TUBE1-208ENST00000604743 IGKV3-20P01619 116 aa10.53□□□□□ -0.72
TUBE1-208ENST00000604743 SPP1P10451 314 aa10.53□□□□□ -0.72
TUBE1-208ENST00000604743 C4BPBP20851 252 aa10.53□□□□□ -0.72
TUBE1-208ENST00000604743 PSMB3P49720 205 aa10.53□□□□□ -0.72
TUBE1-208ENST00000604743 SULT1A1P50225 295 aa10.53□□□□□ -0.72
TUBE1-208ENST00000604743 ZNF546Q86UE3 836 aa10.53□□□□□ -0.72
TUBE1-208ENST00000604743 STX12Q86Y82 276 aa10.53□□□□□ -0.72
TUBE1-208ENST00000604743 TMEM252Q8N6L7 170 aa10.53□□□□□ -0.72
TUBE1-208ENST00000604743 MGST2Q99735 147 aa10.53□□□□□ -0.72
TUBE1-208ENST00000604743 H3BMM0 161 aa10.52□□□□□ -0.73
TUBE1-208ENST00000604743 SOCS3O14543 225 aa10.52□□□□□ -0.73
TUBE1-208ENST00000604743 DEFB4AO15263 64 aa10.52□□□□□ -0.73
TUBE1-208ENST00000604743 RLN2P04090 185 aa10.52□□□□□ -0.73
TUBE1-208ENST00000604743 GIG44P09565 113 aaPredicted RBP10.52□□□□□ -0.73
TUBE1-208ENST00000604743 ATF4P18848 351 aaPredicted RBP10.52□□□□□ -0.73
TUBE1-208ENST00000604743 MEOX2P50222 304 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms