RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 SVEP1Q4LDE5 3571 aa9.82□□□□□ -0.84
HERPUD2-207ENST00000603731 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.82□□□□□ -0.84
HERPUD2-207ENST00000603731 WI2-2373I1.2A0A1W2PRP0 233 aa9.82□□□□□ -0.84
HERPUD2-207ENST00000603731 TCF21O43680 179 aa9.82□□□□□ -0.84
HERPUD2-207ENST00000603731 ARL3P36405 182 aa9.82□□□□□ -0.84
HERPUD2-207ENST00000603731 PSMB3P49720 205 aa9.82□□□□□ -0.84
HERPUD2-207ENST00000603731 PPT1P50897 306 aa9.82□□□□□ -0.84
HERPUD2-207ENST00000603731 HAGHQ16775 308 aa9.82□□□□□ -0.84
HERPUD2-207ENST00000603731 TOR2AQ5JU69 321 aa9.82□□□□□ -0.84
HERPUD2-207ENST00000603731 PATE2Q6UY27 113 aa9.82□□□□□ -0.84
HERPUD2-207ENST00000603731 PQLC2Q6ZP29 291 aa9.82□□□□□ -0.84
HERPUD2-207ENST00000603731 LCNL1Q6ZST4 164 aa9.82□□□□□ -0.84
HERPUD2-207ENST00000603731 LINC00305Q7Z4B0 112 aa9.82□□□□□ -0.84
HERPUD2-207ENST00000603731 EIF4E3Q8N5X7 224 aaKnown RBP9.82□□□□□ -0.84
HERPUD2-207ENST00000603731 OR4X2Q8NGF9 303 aa9.82□□□□□ -0.84
HERPUD2-207ENST00000603731 ANKRD34BA5PLL1 514 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 RBFOX3A6NFN3 312 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 I3L521 148 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 BMPR1BO00238 502 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 OR7C2O60412 319 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 OR2C1O95371 312 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 ARL14EPLP0DKL9 152 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 S100A1P23297 94 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 GCHFRP30047 84 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 ADMP35318 185 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 TAGLN2P37802 199 aaKnown RBP9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 ZNF343Q6P1L6 599 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 C10orf99Q6UWK7 81 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 KLHDC1Q8N7A1 406 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 ZNF491Q8N8L2 437 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 NARS2Q96I59 477 aaKnown RBP9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 UHRF2Q96PU4 802 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 TMPRSS5Q9H3S3 457 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 TMEM231Q9H6L2 316 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 MANBALQ9NQG1 85 aa9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 PUS1Q9Y606 427 aaKnown RBP eCLIP9.81□□□□□ -0.84
HERPUD2-207ENST00000603731 IGHV3-35A0A0C4DH35 117 aa9.8□□□□□ -0.84
HERPUD2-207ENST00000603731 PPP5D1E7EU14 171 aa9.8□□□□□ -0.84
HERPUD2-207ENST00000603731 RPLP1P05386 114 aaKnown RBP9.8□□□□□ -0.84
HERPUD2-207ENST00000603731 STXBP6Q8NFX7 210 aa9.8□□□□□ -0.84
HERPUD2-207ENST00000603731 OR5AU1Q8NGC0 362 aa9.8□□□□□ -0.84
HERPUD2-207ENST00000603731 C16orf95Q9H693 158 aa9.8□□□□□ -0.84
HERPUD2-207ENST00000603731 TMEM167BQ9NRX6 74 aa9.8□□□□□ -0.84
HERPUD2-207ENST00000603731 MRPL27Q9P0M9 148 aaKnown RBP9.8□□□□□ -0.84
HERPUD2-207ENST00000603731 PEF1Q9UBV8 284 aaKnown RBP9.8□□□□□ -0.84
HERPUD2-207ENST00000603731 RABAC1Q9UI14 185 aa9.8□□□□□ -0.84
HERPUD2-207ENST00000603731 RNF24Q9Y225 148 aa9.8□□□□□ -0.84
HERPUD2-207ENST00000603731 TRAV5A0A0B4J249 113 aa9.79□□□□□ -0.84
HERPUD2-207ENST00000603731 LOC102723971A0A1B0GUV8 181 aa9.79□□□□□ -0.84
HERPUD2-207ENST00000603731 BCL2P10415 239 aa9.79□□□□□ -0.84
HERPUD2-207ENST00000603731 PMS2P11Q13670 270 aa9.79□□□□□ -0.84
HERPUD2-207ENST00000603731 ZNF506Q5JVG8 444 aa9.79□□□□□ -0.84
HERPUD2-207ENST00000603731 TOMM20LQ6UXN7 152 aa9.79□□□□□ -0.84
HERPUD2-207ENST00000603731 RXFP4Q8TDU9 374 aa9.79□□□□□ -0.84
HERPUD2-207ENST00000603731 OR5B12Q96R08 314 aa9.79□□□□□ -0.84
HERPUD2-207ENST00000603731 PAXXQ9BUH6 204 aa9.79□□□□□ -0.84
HERPUD2-207ENST00000603731 SLC25A2Q9BXI2 301 aa9.79□□□□□ -0.84
HERPUD2-207ENST00000603731 SLC25A39Q9BZJ4 359 aaPredicted RBP9.79□□□□□ -0.84
HERPUD2-207ENST00000603731 OR51M1Q9H341 326 aa9.79□□□□□ -0.84
HERPUD2-207ENST00000603731 H3BRN7 92 aa9.78□□□□□ -0.84
HERPUD2-207ENST00000603731 GGCTO75223 188 aaKnown RBP9.78□□□□□ -0.84
HERPUD2-207ENST00000603731 NDUFA7O95182 113 aa9.78□□□□□ -0.84
HERPUD2-207ENST00000603731 TRBV12-3P01733 135 aa9.78□□□□□ -0.84
HERPUD2-207ENST00000603731 SRSF3P84103 164 aaKnown RBP9.78□□□□□ -0.84
HERPUD2-207ENST00000603731 USF2Q15853 346 aaPredicted RBP9.78□□□□□ -0.84
HERPUD2-207ENST00000603731 KHDC1LQ5JSQ8 128 aa9.78□□□□□ -0.84
HERPUD2-207ENST00000603731 MORN5Q5VZ52 161 aa9.78□□□□□ -0.84
HERPUD2-207ENST00000603731 RNF152Q8N8N0 203 aa9.78□□□□□ -0.84
HERPUD2-207ENST00000603731 OR4F5Q8NH21 305 aa9.78□□□□□ -0.84
HERPUD2-207ENST00000603731 UBE2E2Q96LR5 201 aa9.78□□□□□ -0.84
HERPUD2-207ENST00000603731 RARRES2Q99969 163 aa9.78□□□□□ -0.84
HERPUD2-207ENST00000603731 SHANK2-AS3Q9BTD1 123 aa9.78□□□□□ -0.84
HERPUD2-207ENST00000603731 SCRT1Q9BWW7 348 aa9.78□□□□□ -0.84
HERPUD2-207ENST00000603731 SMDT1Q9H4I9 107 aa9.78□□□□□ -0.84
HERPUD2-207ENST00000603731 VAX2Q9UIW0 290 aa9.78□□□□□ -0.84
HERPUD2-207ENST00000603731 NDUFA4O00483 81 aa9.77□□□□□ -0.85
HERPUD2-207ENST00000603731 PAGE4O60829 102 aa9.77□□□□□ -0.85
HERPUD2-207ENST00000603731 CD5P06127 495 aa9.77□□□□□ -0.85
HERPUD2-207ENST00000603731 LGALS1P09382 135 aaKnown RBP9.77□□□□□ -0.85
HERPUD2-207ENST00000603731 OR10J4P0C629 311 aa9.77□□□□□ -0.85
HERPUD2-207ENST00000603731 UBE2G2P60604 165 aa9.77□□□□□ -0.85
HERPUD2-207ENST00000603731 UBE2L3P68036 154 aaKnown RBP9.77□□□□□ -0.85
HERPUD2-207ENST00000603731 KIAA0141Q14154 515 aaPredicted RBP9.77□□□□□ -0.85
HERPUD2-207ENST00000603731 CST9LP1Q5W188 147 aa9.77□□□□□ -0.85
HERPUD2-207ENST00000603731 MYOZ3Q8TDC0 251 aa9.77□□□□□ -0.85
HERPUD2-207ENST00000603731 FAM167A-AS1Q96KT0 104 aa9.77□□□□□ -0.85
HERPUD2-207ENST00000603731 METTL26Q96S19 204 aa9.77□□□□□ -0.85
HERPUD2-207ENST00000603731 C20orf24Q9BUV8 137 aa9.77□□□□□ -0.85
HERPUD2-207ENST00000603731 ZFAND3Q9H8U3 227 aa9.77□□□□□ -0.85
HERPUD2-207ENST00000603731 MGAM2Q2M2H8 2515 aa9.77□□□□□ -0.85
HERPUD2-207ENST00000603731 NOTCH1P46531 2555 aa9.76□□□□□ -0.85
HERPUD2-207ENST00000603731 ZNF98A6NK75 572 aa9.76□□□□□ -0.85
HERPUD2-207ENST00000603731 KRBOX1C9JBD0 128 aa9.76□□□□□ -0.85
HERPUD2-207ENST00000603731 HSPB1P04792 205 aaKnown RBP9.76□□□□□ -0.85
HERPUD2-207ENST00000603731 NPPCP23582 126 aa9.76□□□□□ -0.85
HERPUD2-207ENST00000603731 ICAM4Q14773 271 aa9.76□□□□□ -0.85
HERPUD2-207ENST00000603731 FAM106AQ4KMX7 169 aa9.76□□□□□ -0.85
HERPUD2-207ENST00000603731 LEMD1Q68G75 181 aa9.76□□□□□ -0.85
HERPUD2-207ENST00000603731 BPIFA4PQ86YQ2 179 aa9.76□□□□□ -0.85
HERPUD2-207ENST00000603731 LINC01006Q8NI28 216 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms