RNA–Protein interactions for RNA: ENST00000602421.5

MACF1-233, Transcript of microtubule-actin crosslinking factor 1, human

TSL 2 BASIC

Gene MACF1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-233	ENST00000602421	RNF152	Q8N8N0	203 aa		13.87	□□□□□ -0.19
MACF1-233	ENST00000602421	TMEM231	Q9H6L2	316 aa		13.87	□□□□□ -0.19
MACF1-233	ENST00000602421	BMPR1B	O00238	502 aa		13.86	□□□□□ -0.19
MACF1-233	ENST00000602421	OR7C2	O60412	319 aa		13.86	□□□□□ -0.19
MACF1-233	ENST00000602421	SRSF3	P84103	164 aa	Known RBP	13.86	□□□□□ -0.19
MACF1-233	ENST00000602421	PMS2P11	Q13670	270 aa		13.86	□□□□□ -0.19
MACF1-233	ENST00000602421	USF2	Q15853	346 aa	Predicted RBP	13.86	□□□□□ -0.19
MACF1-233	ENST00000602421	MORN5	Q5VZ52	161 aa		13.86	□□□□□ -0.19
MACF1-233	ENST00000602421	TOMM20L	Q6UXN7	152 aa		13.86	□□□□□ -0.19
MACF1-233	ENST00000602421	OR5AU1	Q8NGC0	362 aa		13.86	□□□□□ -0.19
MACF1-233	ENST00000602421	SLC25A2	Q9BXI2	301 aa		13.86	□□□□□ -0.19
MACF1-233	ENST00000602421	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.86	□□□□□ -0.19
MACF1-233	ENST00000602421	PEF1	Q9UBV8	284 aa	Known RBP	13.86	□□□□□ -0.19
MACF1-233	ENST00000602421		I3L521	148 aa		13.85	□□□□□ -0.19
MACF1-233	ENST00000602421	NDUFA7	O95182	113 aa		13.85	□□□□□ -0.19
MACF1-233	ENST00000602421	TRBV12-3	P01733	135 aa		13.85	□□□□□ -0.19
MACF1-233	ENST00000602421	S100A7	P31151	101 aa		13.85	□□□□□ -0.19
MACF1-233	ENST00000602421	MYOZ3	Q8TDC0	251 aa		13.85	□□□□□ -0.19
MACF1-233	ENST00000602421	NARS2	Q96I59	477 aa	Known RBP	13.85	□□□□□ -0.19
MACF1-233	ENST00000602421	FAM167A-AS1	Q96KT0	104 aa		13.85	□□□□□ -0.19
MACF1-233	ENST00000602421	OR5B12	Q96R08	314 aa		13.85	□□□□□ -0.19
MACF1-233	ENST00000602421	RARRES2	Q99969	163 aa		13.85	□□□□□ -0.19
MACF1-233	ENST00000602421	MANBAL	Q9NQG1	85 aa		13.85	□□□□□ -0.19
MACF1-233	ENST00000602421	RABAC1	Q9UI14	185 aa		13.85	□□□□□ -0.19
MACF1-233	ENST00000602421	LOC102723971	A0A1B0GUV8	181 aa		13.84	□□□□□ -0.19
MACF1-233	ENST00000602421	CD5	P06127	495 aa		13.84	□□□□□ -0.19
MACF1-233	ENST00000602421	BCL2	P10415	239 aa		13.84	□□□□□ -0.19
MACF1-233	ENST00000602421	S100A1	P23297	94 aa		13.84	□□□□□ -0.19
MACF1-233	ENST00000602421	ZNF506	Q5JVG8	444 aa		13.84	□□□□□ -0.19
MACF1-233	ENST00000602421	STXBP6	Q8NFX7	210 aa		13.84	□□□□□ -0.19
MACF1-233	ENST00000602421	UBE2E2	Q96LR5	201 aa		13.84	□□□□□ -0.19
MACF1-233	ENST00000602421	SHANK2-AS3	Q9BTD1	123 aa		13.84	□□□□□ -0.19
MACF1-233	ENST00000602421	PAXX	Q9BUH6	204 aa		13.84	□□□□□ -0.19
MACF1-233	ENST00000602421	SCRT1	Q9BWW7	348 aa		13.84	□□□□□ -0.19
MACF1-233	ENST00000602421	TMEM167B	Q9NRX6	74 aa		13.84	□□□□□ -0.19
MACF1-233	ENST00000602421		H3BRN7	92 aa		13.83	□□□□□ -0.2
MACF1-233	ENST00000602421	GGCT	O75223	188 aa	Known RBP	13.83	□□□□□ -0.2
MACF1-233	ENST00000602421	TAGLN2	P37802	199 aa	Known RBP	13.83	□□□□□ -0.2
MACF1-233	ENST00000602421	LINC01006	Q8NI28	216 aa		13.83	□□□□□ -0.2
MACF1-233	ENST00000602421	RXFP4	Q8TDU9	374 aa		13.83	□□□□□ -0.2
MACF1-233	ENST00000602421	ZNF503	Q96F45	646 aa		13.83	□□□□□ -0.2
MACF1-233	ENST00000602421	ZNF414	Q96IQ9	312 aa		13.83	□□□□□ -0.2
MACF1-233	ENST00000602421	OR51M1	Q9H341	326 aa		13.83	□□□□□ -0.2
MACF1-233	ENST00000602421	SMDT1	Q9H4I9	107 aa		13.83	□□□□□ -0.2
MACF1-233	ENST00000602421	ZFAND3	Q9H8U3	227 aa		13.83	□□□□□ -0.2
MACF1-233	ENST00000602421	VAX2	Q9UIW0	290 aa		13.83	□□□□□ -0.2
MACF1-233	ENST00000602421	NDUFA4	O00483	81 aa		13.82	□□□□□ -0.2
MACF1-233	ENST00000602421	LGALS1	P09382	135 aa	Known RBP	13.82	□□□□□ -0.2
MACF1-233	ENST00000602421	ICAM4	Q14773	271 aa		13.82	□□□□□ -0.2
MACF1-233	ENST00000602421	LEMD1	Q68G75	181 aa		13.82	□□□□□ -0.2
MACF1-233	ENST00000602421	OR4F5	Q8NH21	305 aa		13.82	□□□□□ -0.2
MACF1-233	ENST00000602421	RNF24	Q9Y225	148 aa		13.82	□□□□□ -0.2
MACF1-233	ENST00000602421	IGHV3OR16-8	A0A075B7F1	116 aa		13.81	□□□□□ -0.2
MACF1-233	ENST00000602421	PAGE4	O60829	102 aa		13.81	□□□□□ -0.2
MACF1-233	ENST00000602421	UBE2G2	P60604	165 aa		13.81	□□□□□ -0.2
MACF1-233	ENST00000602421	UBE2L3	P68036	154 aa	Known RBP	13.81	□□□□□ -0.2
MACF1-233	ENST00000602421	C20orf24	Q9BUV8	137 aa		13.81	□□□□□ -0.2
MACF1-233	ENST00000602421	ZNF98	A6NK75	572 aa		13.81	□□□□□ -0.2
MACF1-233	ENST00000602421	OR10J4	P0C629	311 aa		13.81	□□□□□ -0.2
MACF1-233	ENST00000602421	PYY	P10082	97 aa		13.81	□□□□□ -0.2
MACF1-233	ENST00000602421	METTL26	Q96S19	204 aa		13.81	□□□□□ -0.2
MACF1-233	ENST00000602421	TMEM218	A2RU14	115 aa		13.8	□□□□□ -0.2
MACF1-233	ENST00000602421		C9JQL5	133 aa		13.8	□□□□□ -0.2
MACF1-233	ENST00000602421	HSPB1	P04792	205 aa	Known RBP	13.8	□□□□□ -0.2
MACF1-233	ENST00000602421	CDX1	P47902	265 aa	Predicted RBP	13.8	□□□□□ -0.2
MACF1-233	ENST00000602421	KHDC1L	Q5JSQ8	128 aa		13.8	□□□□□ -0.2
MACF1-233	ENST00000602421	CST9LP1	Q5W188	147 aa		13.8	□□□□□ -0.2
MACF1-233	ENST00000602421	FN1	P02751	2386 aa	Known RBP	13.8	□□□□□ -0.2
MACF1-233	ENST00000602421	KRBOX1	C9JBD0	128 aa		13.79	□□□□□ -0.2
MACF1-233	ENST00000602421	NPPC	P23582	126 aa		13.79	□□□□□ -0.2
MACF1-233	ENST00000602421	FAM106A	Q4KMX7	169 aa		13.79	□□□□□ -0.2
MACF1-233	ENST00000602421	TCTEX1D4	Q5JR98	221 aa		13.79	□□□□□ -0.2
MACF1-233	ENST00000602421	BPIFA4P	Q86YQ2	179 aa		13.79	□□□□□ -0.2
MACF1-233	ENST00000602421	SUN5	Q8TC36	379 aa		13.79	□□□□□ -0.2
MACF1-233	ENST00000602421	WIPF2	Q8TF74	440 aa	Predicted RBP	13.79	□□□□□ -0.2
MACF1-233	ENST00000602421	FXYD5	Q96DB9	178 aa		13.79	□□□□□ -0.2
MACF1-233	ENST00000602421	SLC35B3	Q9H1N7	401 aa		13.79	□□□□□ -0.2
MACF1-233	ENST00000602421	TMEM14C	Q9P0S9	112 aa		13.79	□□□□□ -0.2
MACF1-233	ENST00000602421	RNF114	Q9Y508	228 aa		13.79	□□□□□ -0.2
MACF1-233	ENST00000602421	F8	P00451	2351 aa		13.79	□□□□□ -0.2
MACF1-233	ENST00000602421	ZNF320	A2RRD8	509 aa		13.78	□□□□□ -0.2
MACF1-233	ENST00000602421	CLPSL1	A2RUU4	121 aa		13.78	□□□□□ -0.2
MACF1-233	ENST00000602421	HAX1	O00165	279 aa		13.78	□□□□□ -0.2
MACF1-233	ENST00000602421	ZNF207	O43670	478 aa	Known RBP	13.78	□□□□□ -0.2
MACF1-233	ENST00000602421	SFTA3	P0C7M3	94 aa		13.78	□□□□□ -0.2
MACF1-233	ENST00000602421	GP9	P14770	177 aa		13.78	□□□□□ -0.2
MACF1-233	ENST00000602421	MEF2B	Q02080	365 aa	Predicted RBP	13.78	□□□□□ -0.2
MACF1-233	ENST00000602421	RPEL1	Q2QD12	228 aa		13.78	□□□□□ -0.2
MACF1-233	ENST00000602421	LINC00052	Q96N35	136 aa		13.78	□□□□□ -0.2
MACF1-233	ENST00000602421	ARL2-SNX15	V9GYD0	113 aa		13.78	□□□□□ -0.2
MACF1-233	ENST00000602421	FAM74A7	A6NL05	159 aa		13.77	□□□□□ -0.21
MACF1-233	ENST00000602421	C11orf94	C9JXX5	98 aa		13.77	□□□□□ -0.21
MACF1-233	ENST00000602421	SRP19	P09132	144 aa	Known RBP	13.77	□□□□□ -0.21
MACF1-233	ENST00000602421	ZP3	P21754	424 aa		13.77	□□□□□ -0.21
MACF1-233	ENST00000602421	SRSF2	Q01130	221 aa	Known RBP	13.77	□□□□□ -0.21
MACF1-233	ENST00000602421	UNQ9165/PRO28630	Q6UXU0	137 aa		13.77	□□□□□ -0.21
MACF1-233	ENST00000602421	GPHB5	Q86YW7	130 aa		13.77	□□□□□ -0.21
MACF1-233	ENST00000602421	OR4F17	Q8NGA8	305 aa		13.77	□□□□□ -0.21
MACF1-233	ENST00000602421	TMEM190	Q8WZ59	177 aa		13.77	□□□□□ -0.21
MACF1-233	ENST00000602421	OR4F4	Q96R69	305 aa		13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms