RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 FABP12A6NFH5 140 aa9.39□□□□□ -0.91
RPS28-204ENST00000602140 F6UB75 175 aa9.39□□□□□ -0.91
RPS28-204ENST00000602140 IAPPP10997 89 aa9.39□□□□□ -0.91
RPS28-204ENST00000602140 TNFSF8P32971 234 aa9.39□□□□□ -0.91
RPS28-204ENST00000602140 RAB11AP62491 216 aa9.39□□□□□ -0.91
RPS28-204ENST00000602140 ZNF79Q15937 498 aa9.39□□□□□ -0.91
RPS28-204ENST00000602140 FAM78BQ5VT40 261 aa9.39□□□□□ -0.91
RPS28-204ENST00000602140 OR8I2Q8N0Y5 310 aa9.39□□□□□ -0.91
RPS28-204ENST00000602140 TRGV9Q99603 122 aa9.39□□□□□ -0.91
RPS28-204ENST00000602140 SOSTQ9BQB4 213 aa9.39□□□□□ -0.91
RPS28-204ENST00000602140 PLA2G2EQ9NZK7 142 aa9.39□□□□□ -0.91
RPS28-204ENST00000602140 DKK2Q9UBU2 259 aa9.39□□□□□ -0.91
RPS28-204ENST00000602140 PAIP2BQ9ULR5 123 aaKnown RBP9.39□□□□□ -0.91
RPS28-204ENST00000602140 DNAH17Q9UFH2 4485 aa9.38□□□□□ -0.91
RPS28-204ENST00000602140 IGKV1OR2-108A0A075B7D4 117 aa9.38□□□□□ -0.91
RPS28-204ENST00000602140 PIGBOS1A0A0B4J2F0 54 aa9.38□□□□□ -0.91
RPS28-204ENST00000602140 PRSS29PA6NIE9 313 aa9.38□□□□□ -0.91
RPS28-204ENST00000602140 ISLRO14498 428 aa9.38□□□□□ -0.91
RPS28-204ENST00000602140 PITX3O75364 302 aa9.38□□□□□ -0.91
RPS28-204ENST00000602140 TMBIM6P55061 237 aa9.38□□□□□ -0.91
RPS28-204ENST00000602140 PAX9P55771 341 aa9.38□□□□□ -0.91
RPS28-204ENST00000602140 PSG9Q00887 426 aa9.38□□□□□ -0.91
RPS28-204ENST00000602140 FAM222AQ5U5X8 452 aa9.38□□□□□ -0.91
RPS28-204ENST00000602140 SPATA31B1PQ5VZV4 182 aa9.38□□□□□ -0.91
RPS28-204ENST00000602140 EBLN2Q6P2I7 272 aa9.38□□□□□ -0.91
RPS28-204ENST00000602140 TMED4Q7Z7H5 227 aa9.38□□□□□ -0.91
RPS28-204ENST00000602140 NIPSNAP3BQ9BS92 247 aa9.38□□□□□ -0.91
RPS28-204ENST00000602140 SLIRPQ9GZT3 109 aaKnown RBP9.38□□□□□ -0.91
RPS28-204ENST00000602140 GOLT1BQ9Y3E0 138 aa9.38□□□□□ -0.91
RPS28-204ENST00000602140 A0A0J9YX75 114 aa9.37□□□□□ -0.91
RPS28-204ENST00000602140 TEX48A0A1B0GUV7 120 aa9.37□□□□□ -0.91
RPS28-204ENST00000602140 DUXBA0A1W2PPF3 345 aa9.37□□□□□ -0.91
RPS28-204ENST00000602140 RTL8CO15255 209 aa9.37□□□□□ -0.91
RPS28-204ENST00000602140 IFNA21P01568 189 aa9.37□□□□□ -0.91
RPS28-204ENST00000602140 FAUP35544 74 aaKnown RBP9.37□□□□□ -0.91
RPS28-204ENST00000602140 TMEM128Q5BJH2 165 aa9.37□□□□□ -0.91
RPS28-204ENST00000602140 C1orf158Q8N1D5 194 aa9.37□□□□□ -0.91
RPS28-204ENST00000602140 THAP8Q8NA92 274 aa9.37□□□□□ -0.91
RPS28-204ENST00000602140 FAM210BQ96KR6 192 aa9.37□□□□□ -0.91
RPS28-204ENST00000602140 C16orf92Q96LL3 132 aa9.37□□□□□ -0.91
RPS28-204ENST00000602140 C20orf173Q96LM9 149 aa9.37□□□□□ -0.91
RPS28-204ENST00000602140 BCL7BQ9BQE9 202 aa9.37□□□□□ -0.91
RPS28-204ENST00000602140 C7orf50Q9BRJ6 194 aaKnown RBP9.37□□□□□ -0.91
RPS28-204ENST00000602140 SLC25A22Q9H936 323 aa9.37□□□□□ -0.91
RPS28-204ENST00000602140 RPRMQ9NS64 109 aa9.37□□□□□ -0.91
RPS28-204ENST00000602140 LOC102723971A0A1B0GUV8 181 aa9.36□□□□□ -0.91
RPS28-204ENST00000602140 HBE1P02100 147 aa9.36□□□□□ -0.91
RPS28-204ENST00000602140 SLC25A6P12236 298 aa9.36□□□□□ -0.91
RPS28-204ENST00000602140 HTN3P15516 51 aa9.36□□□□□ -0.91
RPS28-204ENST00000602140 VAMP1P23763 118 aa9.36□□□□□ -0.91
RPS28-204ENST00000602140 GALR1P47211 349 aa9.36□□□□□ -0.91
RPS28-204ENST00000602140 MEOX2P50222 304 aa9.36□□□□□ -0.91
RPS28-204ENST00000602140 LGALS9BQ3B8N2 356 aa9.36□□□□□ -0.91
RPS28-204ENST00000602140 SAMD13Q5VXD3 122 aa9.36□□□□□ -0.91
RPS28-204ENST00000602140 GGNBP1Q5YKI7 109 aa9.36□□□□□ -0.91
RPS28-204ENST00000602140 UBE2DNLQ8IWF7 75 aa9.36□□□□□ -0.91
RPS28-204ENST00000602140 SLC25A32Q9H2D1 315 aa9.36□□□□□ -0.91
RPS28-204ENST00000602140 YTHDF2Q9Y5A9 579 aaKnown RBP9.36□□□□□ -0.91
RPS28-204ENST00000602140 PKHD1P08F94 4074 aa9.36□□□□□ -0.91
RPS28-204ENST00000602140 IGLV2-18A0A075B6J9 118 aa9.35□□□□□ -0.91
RPS28-204ENST00000602140 ZNF98A6NK75 572 aa9.35□□□□□ -0.91
RPS28-204ENST00000602140 WRBO00258 174 aa9.35□□□□□ -0.91
RPS28-204ENST00000602140 MED6O75586 246 aa9.35□□□□□ -0.91
RPS28-204ENST00000602140 CFDP00746 253 aaPredicted RBP9.35□□□□□ -0.91
RPS28-204ENST00000602140 OXA1LQ15070 435 aa9.35□□□□□ -0.91
RPS28-204ENST00000602140 RRN3P1Q2M238 152 aa9.35□□□□□ -0.91
RPS28-204ENST00000602140 LRTM2Q8N967 370 aa9.35□□□□□ -0.91
RPS28-204ENST00000602140 MCFD2Q8NI22 146 aa9.35□□□□□ -0.91
RPS28-204ENST00000602140 C17orf77Q96MU5 243 aa9.35□□□□□ -0.91
RPS28-204ENST00000602140 CIB3Q96Q77 187 aaPredicted RBP9.35□□□□□ -0.91
RPS28-204ENST00000602140 RSG1Q9BU20 258 aa9.35□□□□□ -0.91
RPS28-204ENST00000602140 MAGT1Q9H0U3 335 aa9.35□□□□□ -0.91
RPS28-204ENST00000602140 DOK5Q9P104 306 aa9.35□□□□□ -0.91
RPS28-204ENST00000602140 PKD1P98161 4303 aa9.34□□□□□ -0.91
RPS28-204ENST00000602140 PRSS46E5RG02 174 aa9.34□□□□□ -0.91
RPS28-204ENST00000602140 H3BMQ9 156 aa9.34□□□□□ -0.91
RPS28-204ENST00000602140 SYNGR2O43760 224 aa9.34□□□□□ -0.91
RPS28-204ENST00000602140 NOL3O60936 208 aaKnown RBP9.34□□□□□ -0.91
RPS28-204ENST00000602140 ORM2P19652 201 aa9.34□□□□□ -0.91
RPS28-204ENST00000602140 GATA2P23769 480 aaPredicted RBP9.34□□□□□ -0.91
RPS28-204ENST00000602140 AP3S2P59780 193 aa9.34□□□□□ -0.91
RPS28-204ENST00000602140 RPP30P78346 268 aaKnown RBP9.34□□□□□ -0.91
RPS28-204ENST00000602140 PYDC2Q56P42 97 aa9.34□□□□□ -0.91
RPS28-204ENST00000602140 AMTNQ6UX39 209 aa9.34□□□□□ -0.91
RPS28-204ENST00000602140 TMEM182Q6ZP80 229 aaPredicted RBP9.34□□□□□ -0.91
RPS28-204ENST00000602140 TOMM5Q8N4H5 51 aa9.34□□□□□ -0.91
RPS28-204ENST00000602140 BPIFCQ8NFQ6 507 aa9.34□□□□□ -0.91
RPS28-204ENST00000602140 TRIM63Q969Q1 353 aa9.34□□□□□ -0.91
RPS28-204ENST00000602140 TMEM208Q9BTX3 173 aa9.34□□□□□ -0.91
RPS28-204ENST00000602140 SLC45A2Q9UMX9 530 aa9.34□□□□□ -0.91
RPS28-204ENST00000602140 TMED3Q9Y3Q3 217 aa9.34□□□□□ -0.91
RPS28-204ENST00000602140 A8MTW9 85 aa9.33□□□□□ -0.92
RPS28-204ENST00000602140 SFT2D2O95562 160 aa9.33□□□□□ -0.92
RPS28-204ENST00000602140 HOXB5P09067 269 aa9.33□□□□□ -0.92
RPS28-204ENST00000602140 MED14OSP0DP75 135 aa9.33□□□□□ -0.92
RPS28-204ENST00000602140 DAD1P61803 113 aa9.33□□□□□ -0.92
RPS28-204ENST00000602140 PPP1R1AQ13522 171 aa9.33□□□□□ -0.92
RPS28-204ENST00000602140 SPANXN5Q5MJ07 72 aa9.33□□□□□ -0.92
RPS28-204ENST00000602140 TMEM88Q6PEY1 159 aa9.33□□□□□ -0.92
RPS28-204ENST00000602140 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms