RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 NMSQ5H8A3 153 aa6.84□□□□□ -1.31
VRK3-224ENST00000601849 GPR141Q7Z602 305 aa6.84□□□□□ -1.31
VRK3-224ENST00000601849 OR4D10Q8NGI6 311 aa6.84□□□□□ -1.31
VRK3-224ENST00000601849 C16orf92Q96LL3 132 aa6.84□□□□□ -1.31
VRK3-224ENST00000601849 RTBDNQ9BSG5 229 aaPredicted RBP6.84□□□□□ -1.31
VRK3-224ENST00000601849 SCP2D1Q9UJQ7 156 aa6.84□□□□□ -1.31
VRK3-224ENST00000601849 TMEM56-RWDD3S4R434 201 aa6.84□□□□□ -1.31
VRK3-224ENST00000601849 AGRNO00468 2067 aa6.83□□□□□ -1.32
VRK3-224ENST00000601849 NXPH3O95157 252 aa6.83□□□□□ -1.32
VRK3-224ENST00000601849 GALR1P47211 349 aa6.83□□□□□ -1.32
VRK3-224ENST00000601849 LYZP61626 148 aa6.83□□□□□ -1.32
VRK3-224ENST00000601849 SRPXP78539 464 aa6.83□□□□□ -1.32
VRK3-224ENST00000601849 SMCO1Q147U7 214 aa6.83□□□□□ -1.32
VRK3-224ENST00000601849 FAM78BQ5VT40 261 aa6.83□□□□□ -1.32
VRK3-224ENST00000601849 GGNBP1Q5YKI7 109 aa6.83□□□□□ -1.32
VRK3-224ENST00000601849 GPR132Q9UNW8 380 aa6.83□□□□□ -1.32
VRK3-224ENST00000601849 YTHDF2Q9Y5A9 579 aaKnown RBP6.83□□□□□ -1.32
VRK3-224ENST00000601849 ABCA13Q86UQ4 5058 aa6.83□□□□□ -1.32
VRK3-224ENST00000601849 A0A0B4J2A0 478 aa6.82□□□□□ -1.32
VRK3-224ENST00000601849 DUSP14O95147 198 aaKnown RBP6.82□□□□□ -1.32
VRK3-224ENST00000601849 PAX9P55771 341 aa6.82□□□□□ -1.32
VRK3-224ENST00000601849 GAMTQ14353 236 aa6.82□□□□□ -1.32
VRK3-224ENST00000601849 GDF5OSQ5U4N7 250 aa6.82□□□□□ -1.32
VRK3-224ENST00000601849 Q6ZR54 194 aa6.82□□□□□ -1.32
VRK3-224ENST00000601849 S100A7AQ86SG5 101 aa6.82□□□□□ -1.32
VRK3-224ENST00000601849 OR1S1Q8NH92 325 aa6.82□□□□□ -1.32
VRK3-224ENST00000601849 LHFPL5Q8TAF8 219 aa6.82□□□□□ -1.32
VRK3-224ENST00000601849 SCRT1Q9BWW7 348 aa6.82□□□□□ -1.32
VRK3-224ENST00000601849 RBKSQ9H477 322 aa6.82□□□□□ -1.32
VRK3-224ENST00000601849 PPP1R14DQ9NXH3 145 aa6.82□□□□□ -1.32
VRK3-224ENST00000601849 DOK5Q9P104 306 aa6.82□□□□□ -1.32
VRK3-224ENST00000601849 HSPB7Q9UBY9 170 aa6.82□□□□□ -1.32
VRK3-224ENST00000601849 SHPKQ9UHJ6 478 aa6.82□□□□□ -1.32
VRK3-224ENST00000601849 LYRM9A8MSI8 78 aa6.81□□□□□ -1.32
VRK3-224ENST00000601849 MED6O75586 246 aa6.81□□□□□ -1.32
VRK3-224ENST00000601849 TMBIM6P55061 237 aa6.81□□□□□ -1.32
VRK3-224ENST00000601849 CCL18P55774 89 aa6.81□□□□□ -1.32
VRK3-224ENST00000601849 ZNF90Q03938 601 aa6.81□□□□□ -1.32
VRK3-224ENST00000601849 IL18Q14116 193 aa6.81□□□□□ -1.32
VRK3-224ENST00000601849 ZNF79Q15937 498 aa6.81□□□□□ -1.32
VRK3-224ENST00000601849 TMEM88Q6PEY1 159 aa6.81□□□□□ -1.32
VRK3-224ENST00000601849 CLVS1Q8IUQ0 354 aaPredicted RBP6.81□□□□□ -1.32
VRK3-224ENST00000601849 ZNF709Q8N972 641 aa6.81□□□□□ -1.32
VRK3-224ENST00000601849 OR51S1Q8NGJ8 323 aa6.81□□□□□ -1.32
VRK3-224ENST00000601849 IGF2BP2-AS1Q96M15 143 aa6.81□□□□□ -1.32
VRK3-224ENST00000601849 GPR82Q96P67 336 aa6.81□□□□□ -1.32
VRK3-224ENST00000601849 BCL7BQ9BQE9 202 aa6.81□□□□□ -1.32
VRK3-224ENST00000601849 WDR12Q9GZL7 423 aaKnown RBP6.81□□□□□ -1.32
VRK3-224ENST00000601849 SLC35B3Q9H1N7 401 aa6.81□□□□□ -1.32
VRK3-224ENST00000601849 PAIP2BQ9ULR5 123 aaKnown RBP6.81□□□□□ -1.32
VRK3-224ENST00000601849 A0A0J9YX75 114 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 CTDSPLO15194 276 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 INSP01308 110 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 OR2F1Q13607 317 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 SPCS2Q15005 226 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 LCE2DQ5TA82 110 aaPredicted RBP6.8□□□□□ -1.32
VRK3-224ENST00000601849 FAAP20Q6NZ36 180 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 LYZL2Q7Z4W2 148 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 BPIFCQ8NFQ6 507 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 OR4D5Q8NGN0 318 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 OR1B1Q8NGR6 318 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 RAB2BQ8WUD1 216 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 TMEM170AQ8WVE7 144 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 SMIM4Q8WVI0 70 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 DIRAS2Q96HU8 199 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 CIB3Q96Q77 187 aaPredicted RBP6.8□□□□□ -1.32
VRK3-224ENST00000601849 TRGV9Q99603 122 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 RSG1Q9BU20 258 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 SLC25A22Q9H936 323 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 MCUBQ9NWR8 336 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 PLA2G2EQ9NZK7 142 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 RSL24D1Q9UHA3 163 aaKnown RBP6.8□□□□□ -1.32
VRK3-224ENST00000601849 SLC45A2Q9UMX9 530 aa6.8□□□□□ -1.32
VRK3-224ENST00000601849 DUXBA0A1W2PPF3 345 aa6.79□□□□□ -1.32
VRK3-224ENST00000601849 C16orf90A8MZG2 172 aa6.79□□□□□ -1.32
VRK3-224ENST00000601849 F6UB75 175 aa6.79□□□□□ -1.32
VRK3-224ENST00000601849 NUDT3O95989 172 aa6.79□□□□□ -1.32
VRK3-224ENST00000601849 FAUP35544 74 aaKnown RBP6.79□□□□□ -1.32
VRK3-224ENST00000601849 DEFB1P60022 68 aa6.79□□□□□ -1.32
VRK3-224ENST00000601849 CLINT1Q14677 625 aa6.79□□□□□ -1.32
VRK3-224ENST00000601849 C1orf158Q8N1D5 194 aa6.79□□□□□ -1.32
VRK3-224ENST00000601849 OR4C16Q8NGL9 310 aa6.79□□□□□ -1.32
VRK3-224ENST00000601849 TMEM147Q9BVK8 224 aa6.79□□□□□ -1.32
VRK3-224ENST00000601849 RBM38Q9H0Z9 239 aaKnown RBP6.79□□□□□ -1.32
VRK3-224ENST00000601849 RNF24Q9Y225 148 aa6.79□□□□□ -1.32
VRK3-224ENST00000601849 ANKRD20A5PA0PJZ0 165 aa6.78□□□□□ -1.32
VRK3-224ENST00000601849 ZNF98A6NK75 572 aa6.78□□□□□ -1.32
VRK3-224ENST00000601849 F5H768 121 aa6.78□□□□□ -1.32
VRK3-224ENST00000601849 H3BMQ9 156 aa6.78□□□□□ -1.32
VRK3-224ENST00000601849 SOCS3O14543 225 aa6.78□□□□□ -1.32
VRK3-224ENST00000601849 ATP5G1P05496 136 aa6.78□□□□□ -1.32
VRK3-224ENST00000601849 DEFB130BP0DP73 79 aa6.78□□□□□ -1.32
VRK3-224ENST00000601849 DEFB130AP0DP74 79 aa6.78□□□□□ -1.32
VRK3-224ENST00000601849 ORM2P19652 201 aa6.78□□□□□ -1.32
VRK3-224ENST00000601849 ATP5G3P48201 142 aa6.78□□□□□ -1.32
VRK3-224ENST00000601849 RHOBP62745 196 aa6.78□□□□□ -1.32
VRK3-224ENST00000601849 FGL1Q08830 312 aa6.78□□□□□ -1.32
VRK3-224ENST00000601849 ZNF575Q86XF7 245 aa6.78□□□□□ -1.32
VRK3-224ENST00000601849 C6orf223Q8N319 242 aa6.78□□□□□ -1.32
VRK3-224ENST00000601849 LRRC20Q8TCA0 184 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms