RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685		Q9H3A6	140 aa		13.3	□□□□□ -0.28
CAPN12-211	ENST00000601685	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.29	□□□□□ -0.28
CAPN12-211	ENST00000601685	CRYGC	P07315	174 aa		13.29	□□□□□ -0.28
CAPN12-211	ENST00000601685	RUSC1-AS1	Q66K80	236 aa		13.29	□□□□□ -0.28
CAPN12-211	ENST00000601685		H0Y8G0	127 aa		13.29	□□□□□ -0.28
CAPN12-211	ENST00000601685	IGLV2-23	P01705	113 aa		13.29	□□□□□ -0.28
CAPN12-211	ENST00000601685	NEU4	Q8WWR8	484 aa	Predicted RBP	13.29	□□□□□ -0.28
CAPN12-211	ENST00000601685	TRGV9	Q99603	122 aa		13.29	□□□□□ -0.28
CAPN12-211	ENST00000601685	PEF1	Q9UBV8	284 aa	Known RBP	13.29	□□□□□ -0.28
CAPN12-211	ENST00000601685	TRAV8-6	A0A0B4J262	113 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685		A0A1W2PPI3	338 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685	COX8A	P10176	69 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685	TEX36	Q5VZQ5	186 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685	FAM71F2	Q6NXP2	309 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685	IGFL2	Q6UWQ7	119 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685	SEM1	Q6ZVN7	128 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685	BDP1	A6H8Y1	2624 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685		H3BTX0	84 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685	OVOL3	O00110	214 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685	FAM87A	P0C7U9	286 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685	COL8A1	P27658	744 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685	ARF6	P62330	175 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685	TIMM23B	Q5SRD1	257 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685	C2orf91	Q6ZV80	131 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685		Q86TA4	180 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685	OR10X1	Q8NGY0	326 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685	PMCHL2	Q9BQD1	86 aa		13.28	□□□□□ -0.28
CAPN12-211	ENST00000601685	C16orf54	Q6UWD8	224 aa		13.27	□□□□□ -0.28
CAPN12-211	ENST00000601685	GAGE12B	A1L429	117 aa		13.27	□□□□□ -0.29
CAPN12-211	ENST00000601685	CCL3L1	P16619	93 aa		13.27	□□□□□ -0.29
CAPN12-211	ENST00000601685	HTR1D	P28221	377 aa		13.27	□□□□□ -0.29
CAPN12-211	ENST00000601685	CIART	Q8N365	385 aa	Predicted RBP	13.27	□□□□□ -0.29
CAPN12-211	ENST00000601685	CSN3	P07498	182 aa		13.27	□□□□□ -0.29
CAPN12-211	ENST00000601685	MEF2C	Q06413	473 aa	Predicted RBP	13.27	□□□□□ -0.29
CAPN12-211	ENST00000601685	DIAPH2-AS1	Q14236	149 aa		13.27	□□□□□ -0.29
CAPN12-211	ENST00000601685	PVRIG	Q6DKI7	326 aa		13.27	□□□□□ -0.29
CAPN12-211	ENST00000601685	DYSF	O75923	2080 aa		13.26	□□□□□ -0.29
CAPN12-211	ENST00000601685	FOXE3	Q13461	319 aa		13.26	□□□□□ -0.29
CAPN12-211	ENST00000601685	ZNF747	Q9BV97	191 aa		13.26	□□□□□ -0.29
CAPN12-211	ENST00000601685	TPSG1	Q9NRR2	321 aa		13.26	□□□□□ -0.29
CAPN12-211	ENST00000601685	TRAV8-1	A0A0A6YYK1	113 aa		13.26	□□□□□ -0.29
CAPN12-211	ENST00000601685	C3orf36	Q3SXR2	165 aa		13.26	□□□□□ -0.29
CAPN12-211	ENST00000601685	BPIFA4P	Q86YQ2	179 aa		13.26	□□□□□ -0.29
CAPN12-211	ENST00000601685	C8orf46	Q8TAG6	207 aa		13.26	□□□□□ -0.29
CAPN12-211	ENST00000601685	LAMA5	O15230	3695 aa		13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685	PLCE1	Q9P212	2302 aa		13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685	SLC25A17	O43808	307 aa		13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685	IGLC1	P0CG04	106 aa		13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685	PLP1	P60201	277 aa		13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685	MRGPRG-AS1	Q2M3A8	158 aa		13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685	VMA21	Q3ZAQ7	101 aa		13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685	HCP5	Q6MZN7	132 aa		13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685	OTOR	Q9NRC9	128 aa		13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685	AP5S1	Q9NUS5	200 aa		13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685	C7orf71	A4D174	169 aa		13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685		K7ERU9	68 aa		13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685	IGLV2-11	P01706	119 aa		13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685	GATD1	Q8NB37	220 aa		13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685	TMEM116	Q8NCL8	245 aa		13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685	TMEM186	Q96B77	213 aa		13.25	□□□□□ -0.29
CAPN12-211	ENST00000601685	SMG1	Q96Q15	3661 aa	Known RBP	13.24	□□□□□ -0.29
CAPN12-211	ENST00000601685		A0A1B0GUT8	65 aa		13.24	□□□□□ -0.29
CAPN12-211	ENST00000601685	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.24	□□□□□ -0.29
CAPN12-211	ENST00000601685	MBD3L3	A6NE82	208 aa	Predicted RBP	13.24	□□□□□ -0.29
CAPN12-211	ENST00000601685	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.24	□□□□□ -0.29
CAPN12-211	ENST00000601685	SEC11A	P67812	179 aa		13.24	□□□□□ -0.29
CAPN12-211	ENST00000601685	TMEM97	Q5BJF2	176 aa		13.24	□□□□□ -0.29
CAPN12-211	ENST00000601685	RPRML	Q8N4K4	120 aa		13.24	□□□□□ -0.29
CAPN12-211	ENST00000601685	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.24	□□□□□ -0.29
CAPN12-211	ENST00000601685	DEFB109B	Q30KR1	87 aa		13.24	□□□□□ -0.29
CAPN12-211	ENST00000601685	TMEM200B	Q69YZ2	307 aa		13.24	□□□□□ -0.29
CAPN12-211	ENST00000601685	PRNT	Q86SH4	94 aa		13.24	□□□□□ -0.29
CAPN12-211	ENST00000601685	NCR2	O95944	276 aa		13.23	□□□□□ -0.29
CAPN12-211	ENST00000601685	HOXB4	P17483	251 aa	Predicted RBP	13.23	□□□□□ -0.29
CAPN12-211	ENST00000601685	RIG	Q13278	110 aa		13.23	□□□□□ -0.29
CAPN12-211	ENST00000601685		Q71RC1	249 aa	Predicted RBP	13.23	□□□□□ -0.29
CAPN12-211	ENST00000601685	CSTL1	Q9H114	145 aa		13.23	□□□□□ -0.29
CAPN12-211	ENST00000601685	TTC28	Q96AY4	2481 aa		13.23	□□□□□ -0.29
CAPN12-211	ENST00000601685	TRBV6-1	A0A0K0K1D8	114 aa		13.23	□□□□□ -0.29
CAPN12-211	ENST00000601685	ZNF785	A8K8V0	405 aa		13.23	□□□□□ -0.29
CAPN12-211	ENST00000601685	SNAI2	O43623	268 aa		13.23	□□□□□ -0.29
CAPN12-211	ENST00000601685	ARMS2	P0C7Q2	107 aa		13.23	□□□□□ -0.29
CAPN12-211	ENST00000601685	CSN1S1	P47710	185 aa		13.23	□□□□□ -0.29
CAPN12-211	ENST00000601685	LINC00311	Q8N616	119 aa		13.23	□□□□□ -0.29
CAPN12-211	ENST00000601685	OR10AG1	Q8NH19	301 aa		13.23	□□□□□ -0.29
CAPN12-211	ENST00000601685	RITA1	Q96K30	269 aa		13.23	□□□□□ -0.29
CAPN12-211	ENST00000601685	GOLT1A	Q6ZVE7	132 aa		13.22	□□□□□ -0.29
CAPN12-211	ENST00000601685	TEX45	Q8NA69	505 aa		13.22	□□□□□ -0.29
CAPN12-211	ENST00000601685	DPF1	Q92782	380 aa		13.22	□□□□□ -0.29
CAPN12-211	ENST00000601685	HIGD1A	Q9Y241	93 aa		13.22	□□□□□ -0.29
CAPN12-211	ENST00000601685	FCN3	O75636	299 aa		13.22	□□□□□ -0.29
CAPN12-211	ENST00000601685	FGF6	P10767	208 aa		13.22	□□□□□ -0.29
CAPN12-211	ENST00000601685	FA2H	Q7L5A8	372 aa		13.22	□□□□□ -0.29
CAPN12-211	ENST00000601685	SRSF12	Q8WXF0	261 aa	Known RBP	13.22	□□□□□ -0.29
CAPN12-211	ENST00000601685	TMEM14C	Q9P0S9	112 aa		13.22	□□□□□ -0.29
CAPN12-211	ENST00000601685	IGHV3-21	A0A0B4J1V1	117 aa		13.21	□□□□□ -0.29
CAPN12-211	ENST00000601685	SPAAR	A0A1B0GVQ0	90 aa		13.21	□□□□□ -0.29
CAPN12-211	ENST00000601685	GAGE10	A6NGK3	116 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms