RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 C2orf70A6NJV1 201 aa10.92□□□□□ -0.66
UPF1-211ENST00000600868 ZNF207O43670 478 aaKnown RBP10.92□□□□□ -0.66
UPF1-211ENST00000600868 COX7A2P2O60397 106 aa10.92□□□□□ -0.66
UPF1-211ENST00000600868 SEC11BP0C7V7 166 aa10.92□□□□□ -0.66
UPF1-211ENST00000600868 C8orf88P0DMB2 117 aa10.92□□□□□ -0.66
UPF1-211ENST00000600868 S100A7P31151 101 aa10.92□□□□□ -0.66
UPF1-211ENST00000600868 PATE2Q6UY27 113 aa10.92□□□□□ -0.66
UPF1-211ENST00000600868 IL34Q6ZMJ4 242 aa10.92□□□□□ -0.66
UPF1-211ENST00000600868 S100A7AQ86SG5 101 aa10.92□□□□□ -0.66
UPF1-211ENST00000600868 WFDC9Q8NEX5 89 aa10.92□□□□□ -0.66
UPF1-211ENST00000600868 GATAD1Q8WUU5 269 aa10.92□□□□□ -0.66
UPF1-211ENST00000600868 TMEM37Q8WXS4 190 aa10.92□□□□□ -0.66
UPF1-211ENST00000600868 ST8SIA2Q92186 375 aa10.92□□□□□ -0.66
UPF1-211ENST00000600868 PFDN5Q99471 154 aa10.92□□□□□ -0.66
UPF1-211ENST00000600868 ELOVL1Q9BW60 279 aa10.92□□□□□ -0.66
UPF1-211ENST00000600868 SLC25A32Q9H2D1 315 aa10.92□□□□□ -0.66
UPF1-211ENST00000600868 DOK5Q9P104 306 aa10.92□□□□□ -0.66
UPF1-211ENST00000600868 HIGD1AQ9Y241 93 aa10.92□□□□□ -0.66
UPF1-211ENST00000600868 WNK1Q9H4A3 2382 aa10.91□□□□□ -0.66
UPF1-211ENST00000600868 IGHV7-4-1A0A0J9YVY3 117 aa10.91□□□□□ -0.66
UPF1-211ENST00000600868 MBP02144 154 aa10.91□□□□□ -0.66
UPF1-211ENST00000600868 CSN3P07498 182 aa10.91□□□□□ -0.66
UPF1-211ENST00000600868 OR5G3P0C626 314 aa10.91□□□□□ -0.66
UPF1-211ENST00000600868 CBLN1P23435 193 aa10.91□□□□□ -0.66
UPF1-211ENST00000600868 ACOT6Q3I5F7 207 aaPredicted RBP10.91□□□□□ -0.66
UPF1-211ENST00000600868 EIF5AL1Q6IS14 154 aaKnown RBP10.91□□□□□ -0.66
UPF1-211ENST00000600868 SIGLEC8Q9NYZ4 499 aa10.91□□□□□ -0.66
UPF1-211ENST00000600868 SMPXQ9UHP9 88 aa10.91□□□□□ -0.66
UPF1-211ENST00000600868 PFDN2Q9UHV9 154 aa10.91□□□□□ -0.66
UPF1-211ENST00000600868 ANK2Q01484 3957 aa10.91□□□□□ -0.66
UPF1-211ENST00000600868 VWFP04275 2813 aa10.9□□□□□ -0.66
UPF1-211ENST00000600868 A0A1W2PS18 150 aa10.9□□□□□ -0.66
UPF1-211ENST00000600868 FOLR2P14207 255 aa10.9□□□□□ -0.66
UPF1-211ENST00000600868 M6PRP20645 277 aa10.9□□□□□ -0.66
UPF1-211ENST00000600868 BMI1P35226 326 aa10.9□□□□□ -0.66
UPF1-211ENST00000600868 GCSAMLQ5JQS6 135 aa10.9□□□□□ -0.66
UPF1-211ENST00000600868 C10orf113Q5VZT2 155 aa10.9□□□□□ -0.66
UPF1-211ENST00000600868 ADAMTSL5Q6ZMM2 481 aa10.9□□□□□ -0.66
UPF1-211ENST00000600868 NARS2Q96I59 477 aaKnown RBP10.9□□□□□ -0.66
UPF1-211ENST00000600868 SLC25A39Q9BZJ4 359 aaPredicted RBP10.9□□□□□ -0.66
UPF1-211ENST00000600868 VSIRQ9H7M9 311 aa10.9□□□□□ -0.66
UPF1-211ENST00000600868 H3BRN7 92 aa10.89□□□□□ -0.67
UPF1-211ENST00000600868 BUB3O43684 328 aa10.89□□□□□ -0.67
UPF1-211ENST00000600868 APOHP02749 345 aaPredicted RBP10.89□□□□□ -0.67
UPF1-211ENST00000600868 CD33P20138 364 aa10.89□□□□□ -0.67
UPF1-211ENST00000600868 TMEM41BQ5BJD5 291 aa10.89□□□□□ -0.67
UPF1-211ENST00000600868 C1orf194Q5T5A4 169 aa10.89□□□□□ -0.67
UPF1-211ENST00000600868 LINC00305Q7Z4B0 112 aa10.89□□□□□ -0.67
UPF1-211ENST00000600868 TMED6Q8WW62 240 aa10.89□□□□□ -0.67
UPF1-211ENST00000600868 RNF2Q99496 336 aa10.89□□□□□ -0.67
UPF1-211ENST00000600868 SHANK2-AS3Q9BTD1 123 aa10.89□□□□□ -0.67
UPF1-211ENST00000600868 MCRIP2Q9BUT9 160 aaKnown RBP10.89□□□□□ -0.67
UPF1-211ENST00000600868 RHPN1-AS1Q9BWJ2 59 aa10.89□□□□□ -0.67
UPF1-211ENST00000600868 TMEM231Q9H6L2 316 aa10.89□□□□□ -0.67
UPF1-211ENST00000600868 RNF24Q9Y225 148 aa10.89□□□□□ -0.67
UPF1-211ENST00000600868 IGHV3-49A0A0A0MS15 119 aa10.88□□□□□ -0.67
UPF1-211ENST00000600868 ZNF98A6NK75 572 aa10.88□□□□□ -0.67
UPF1-211ENST00000600868 UMAD1C9J7I0 102 aa10.88□□□□□ -0.67
UPF1-211ENST00000600868 CHEK1O14757 476 aa10.88□□□□□ -0.67
UPF1-211ENST00000600868 EDN2P20800 178 aa10.88□□□□□ -0.67
UPF1-211ENST00000600868 RAB2AP61019 212 aa10.88□□□□□ -0.67
UPF1-211ENST00000600868 AKR1C8PQ5T2L2 129 aa10.88□□□□□ -0.67
UPF1-211ENST00000600868 FAM78BQ5VT40 261 aa10.88□□□□□ -0.67
UPF1-211ENST00000600868 OR10G4Q8NGN3 311 aa10.88□□□□□ -0.67
UPF1-211ENST00000600868 OR10G9Q8NGN4 311 aa10.88□□□□□ -0.67
UPF1-211ENST00000600868 OR10G7Q8NGN6 311 aa10.88□□□□□ -0.67
UPF1-211ENST00000600868 PHYHIPLQ96FC7 376 aa10.88□□□□□ -0.67
UPF1-211ENST00000600868 GRAMD2BQ96HH9 432 aa10.88□□□□□ -0.67
UPF1-211ENST00000600868 UHRF2Q96PU4 802 aa10.88□□□□□ -0.67
UPF1-211ENST00000600868 MRPL32Q9BYC8 188 aaKnown RBP10.88□□□□□ -0.67
UPF1-211ENST00000600868 RPRMQ9NS64 109 aa10.88□□□□□ -0.67
UPF1-211ENST00000600868 SEC14L6B5MCN3 397 aa10.87□□□□□ -0.67
UPF1-211ENST00000600868 RHOBP62745 196 aa10.87□□□□□ -0.67
UPF1-211ENST00000600868 PRR31Q5SQ13 230 aa10.87□□□□□ -0.67
UPF1-211ENST00000600868 C16orf54Q6UWD8 224 aa10.87□□□□□ -0.67
UPF1-211ENST00000600868 RPP25LQ8N5L8 163 aaKnown RBP10.87□□□□□ -0.67
UPF1-211ENST00000600868 SCRT1Q9BWW7 348 aa10.87□□□□□ -0.67
UPF1-211ENST00000600868 SEPSECSQ9HD40 501 aaKnown RBP10.87□□□□□ -0.67
UPF1-211ENST00000600868 TECRQ9NZ01 308 aaKnown RBP10.87□□□□□ -0.67
UPF1-211ENST00000600868 PLA2G2EQ9NZK7 142 aa10.87□□□□□ -0.67
UPF1-211ENST00000600868 FUT9Q9Y231 359 aa10.87□□□□□ -0.67
UPF1-211ENST00000600868 IGHV3OR16-13A0A075B7E8 117 aa10.86□□□□□ -0.67
UPF1-211ENST00000600868 IGHV3-74A0A0B4J1X5 117 aa10.86□□□□□ -0.67
UPF1-211ENST00000600868 IGHV3-66A0A0C4DH42 116 aa10.86□□□□□ -0.67
UPF1-211ENST00000600868 SAP30O75446 220 aa10.86□□□□□ -0.67
UPF1-211ENST00000600868 CD5P06127 495 aa10.86□□□□□ -0.67
UPF1-211ENST00000600868 INSL3P51460 131 aa10.86□□□□□ -0.67
UPF1-211ENST00000600868 C9orf66Q5T8R8 295 aa10.86□□□□□ -0.67
UPF1-211ENST00000600868 MORN5Q5VZ52 161 aa10.86□□□□□ -0.67
UPF1-211ENST00000600868 DYNLRB2Q8TF09 96 aa10.86□□□□□ -0.67
UPF1-211ENST00000600868 GLMPQ8WWB7 406 aa10.86□□□□□ -0.67
UPF1-211ENST00000600868 MLXQ9UH92 298 aa10.86□□□□□ -0.67
UPF1-211ENST00000600868 A0A1W2PPV4 95 aa10.85□□□□□ -0.67
UPF1-211ENST00000600868 SULT1A2P50226 295 aa10.85□□□□□ -0.67
UPF1-211ENST00000600868 RAB5CP51148 216 aa10.85□□□□□ -0.67
UPF1-211ENST00000600868 DEFB114Q30KQ6 69 aa10.85□□□□□ -0.67
UPF1-211ENST00000600868 SPATA31B1PQ5VZV4 182 aa10.85□□□□□ -0.67
UPF1-211ENST00000600868 FAM122CQ6P4D5 195 aa10.85□□□□□ -0.67
UPF1-211ENST00000600868 DPPA3Q6W0C5 159 aa10.85□□□□□ -0.67
UPF1-211ENST00000600868 MIR17HGQ75NE6 70 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms