RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 MS4A6AQ9H2W1 248 aa9.76□□□□□ -0.85
SRRM1-223ENST00000600523 OR5AC2Q9NZP5 309 aa9.76□□□□□ -0.85
SRRM1-223ENST00000600523 U3KQE9 123 aa9.76□□□□□ -0.85
SRRM1-223ENST00000600523 UBE2L5PA0A1B0GUS4 154 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 AGPAT2O15120 278 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 BUB3O43684 328 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 MPDU1O75352 247 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 OR5G3P0C626 314 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 FRMD6-AS1P0C7T7 363 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 CAMLGP49069 296 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 EWSR1Q01844 656 aaKnown RBP eCLIP9.75□□□□□ -0.85
SRRM1-223ENST00000600523 ARL16Q0P5N6 197 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 FCN2Q15485 313 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 FAM90A2PQ658T7 463 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 SIGLEC15Q6ZMC9 328 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 WFDC3Q8IUB2 231 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 STPG3Q8N7X2 389 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 ZNF709Q8N972 641 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 OR5C1Q8NGR4 320 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 GPR82Q96P67 336 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 KCNIP2Q9NS61 270 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 HIGD1AQ9Y241 93 aa9.75□□□□□ -0.85
SRRM1-223ENST00000600523 GIPP09681 153 aaPredicted RBP9.74□□□□□ -0.85
SRRM1-223ENST00000600523 CXCL3P19876 107 aa9.74□□□□□ -0.85
SRRM1-223ENST00000600523 GALR1P47211 349 aa9.74□□□□□ -0.85
SRRM1-223ENST00000600523 SNRPD3P62318 126 aaKnown RBP9.74□□□□□ -0.85
SRRM1-223ENST00000600523 DEFB125Q8N687 156 aa9.74□□□□□ -0.85
SRRM1-223ENST00000600523 GLMPQ8WWB7 406 aa9.74□□□□□ -0.85
SRRM1-223ENST00000600523 ARL6Q9H0F7 186 aa9.74□□□□□ -0.85
SRRM1-223ENST00000600523 SRD5A3Q9H8P0 318 aa9.74□□□□□ -0.85
SRRM1-223ENST00000600523 MBD2Q9UBB5 411 aa9.74□□□□□ -0.85
SRRM1-223ENST00000600523 ELOA3CA0A087WX78 387 aaPredicted RBP9.73□□□□□ -0.85
SRRM1-223ENST00000600523 H0YIZ8 118 aa9.73□□□□□ -0.85
SRRM1-223ENST00000600523 COX7A2P2O60397 106 aa9.73□□□□□ -0.85
SRRM1-223ENST00000600523 IFNA5P01569 189 aa9.73□□□□□ -0.85
SRRM1-223ENST00000600523 FGF7P21781 194 aa9.73□□□□□ -0.85
SRRM1-223ENST00000600523 GATA2P23769 480 aaPredicted RBP9.73□□□□□ -0.85
SRRM1-223ENST00000600523 RPL12P30050 165 aaKnown RBP9.73□□□□□ -0.85
SRRM1-223ENST00000600523 NHLH2Q02577 135 aa9.73□□□□□ -0.85
SRRM1-223ENST00000600523 VWC2Q2TAL6 325 aa9.73□□□□□ -0.85
SRRM1-223ENST00000600523 OR11H7Q8NGC8 314 aa9.73□□□□□ -0.85
SRRM1-223ENST00000600523 OR1L4Q8NGR5 311 aa9.73□□□□□ -0.85
SRRM1-223ENST00000600523 ZMAT4Q9H898 229 aa9.73□□□□□ -0.85
SRRM1-223ENST00000600523 SLC25A22Q9H936 323 aa9.73□□□□□ -0.85
SRRM1-223ENST00000600523 NRN1Q9NPD7 142 aa9.73□□□□□ -0.85
SRRM1-223ENST00000600523 DOK5Q9P104 306 aa9.73□□□□□ -0.85
SRRM1-223ENST00000600523 UBQLN2Q9UHD9 624 aa9.73□□□□□ -0.85
SRRM1-223ENST00000600523 WDR83OSQ9Y284 106 aa9.73□□□□□ -0.85
SRRM1-223ENST00000600523 ZNF98A6NK75 572 aa9.72□□□□□ -0.85
SRRM1-223ENST00000600523 C17orf112F2Z3M2 114 aa9.72□□□□□ -0.85
SRRM1-223ENST00000600523 RPL7P18124 248 aaKnown RBP9.72□□□□□ -0.85
SRRM1-223ENST00000600523 ID1P41134 155 aa9.72□□□□□ -0.85
SRRM1-223ENST00000600523 MEOX2P50222 304 aa9.72□□□□□ -0.85
SRRM1-223ENST00000600523 PLP1P60201 277 aa9.72□□□□□ -0.85
SRRM1-223ENST00000600523 CLINT1Q14677 625 aa9.72□□□□□ -0.85
SRRM1-223ENST00000600523 INO80EQ8NBZ0 244 aaPredicted RBP9.72□□□□□ -0.85
SRRM1-223ENST00000600523 SCGB1C1Q8TD33 95 aa9.72□□□□□ -0.85
SRRM1-223ENST00000600523 PFDN5Q99471 154 aa9.72□□□□□ -0.85
SRRM1-223ENST00000600523 MGST2Q99735 147 aa9.72□□□□□ -0.85
SRRM1-223ENST00000600523 RNF126Q9BV68 326 aa9.72□□□□□ -0.85
SRRM1-223ENST00000600523 C19orf73Q9NVV2 129 aa9.72□□□□□ -0.85
SRRM1-223ENST00000600523 HSPB11Q9Y547 144 aa9.72□□□□□ -0.85
SRRM1-223ENST00000600523 LOC102724200A0A096LPH7 203 aaPredicted RBP9.71□□□□□ -0.86
SRRM1-223ENST00000600523 RPL29P47914 159 aaKnown RBP9.71□□□□□ -0.86
SRRM1-223ENST00000600523 APOC4P55056 127 aa9.71□□□□□ -0.86
SRRM1-223ENST00000600523 C10orf113Q5VZT2 155 aa9.71□□□□□ -0.86
SRRM1-223ENST00000600523 ATP5SQ99766 215 aa9.71□□□□□ -0.86
SRRM1-223ENST00000600523 ASCL2Q99929 193 aa9.71□□□□□ -0.86
SRRM1-223ENST00000600523 GGTLC1Q9BX51 225 aa9.71□□□□□ -0.86
SRRM1-223ENST00000600523 SLC25A39Q9BZJ4 359 aaPredicted RBP9.71□□□□□ -0.86
SRRM1-223ENST00000600523 ARV1Q9H2C2 271 aa9.71□□□□□ -0.86
SRRM1-223ENST00000600523 SEPSECSQ9HD40 501 aaKnown RBP9.71□□□□□ -0.86
SRRM1-223ENST00000600523 K7EQG2 157 aa9.7□□□□□ -0.86
SRRM1-223ENST00000600523 LYL1P12980 280 aa9.7□□□□□ -0.86
SRRM1-223ENST00000600523 ATF4P18848 351 aaPredicted RBP9.7□□□□□ -0.86
SRRM1-223ENST00000600523 B2MP61769 119 aa9.7□□□□□ -0.86
SRRM1-223ENST00000600523 ODF3L2Q3SX64 289 aa9.7□□□□□ -0.86
SRRM1-223ENST00000600523 TMEM182Q6ZP80 229 aaPredicted RBP9.7□□□□□ -0.86
SRRM1-223ENST00000600523 OR2T35Q8NGX2 323 aa9.7□□□□□ -0.86
SRRM1-223ENST00000600523 SHANK2-AS3Q9BTD1 123 aa9.7□□□□□ -0.86
SRRM1-223ENST00000600523 DNAJC4Q9NNZ3 241 aa9.7□□□□□ -0.86
SRRM1-223ENST00000600523 SLC39A9Q9NUM3 307 aa9.7□□□□□ -0.86
SRRM1-223ENST00000600523 DEFB131AP59861 70 aa9.69□□□□□ -0.86
SRRM1-223ENST00000600523 ZNF266Q14584 549 aa9.69□□□□□ -0.86
SRRM1-223ENST00000600523 OPCMLQ14982 345 aa9.69□□□□□ -0.86
SRRM1-223ENST00000600523 MIC13Q5XKP0 118 aa9.69□□□□□ -0.86
SRRM1-223ENST00000600523 LINC00305Q7Z4B0 112 aa9.69□□□□□ -0.86
SRRM1-223ENST00000600523 LRRC20Q8TCA0 184 aa9.69□□□□□ -0.86
SRRM1-223ENST00000600523 DCANP1Q8TF63 244 aa9.69□□□□□ -0.86
SRRM1-223ENST00000600523 CHAC2Q8WUX2 184 aa9.69□□□□□ -0.86
SRRM1-223ENST00000600523 SPATA25Q9BR10 227 aa9.69□□□□□ -0.86
SRRM1-223ENST00000600523 NPCDR1Q9BY65 106 aa9.69□□□□□ -0.86
SRRM1-223ENST00000600523 WFDC10AQ9H1F0 79 aa9.69□□□□□ -0.86
SRRM1-223ENST00000600523 MAP6D1Q9H9H5 199 aa9.69□□□□□ -0.86
SRRM1-223ENST00000600523 PXMP4Q9Y6I8 212 aa9.69□□□□□ -0.86
SRRM1-223ENST00000600523 H3BRN7 92 aa9.68□□□□□ -0.86
SRRM1-223ENST00000600523 ZNF688P0C7X2 276 aa9.68□□□□□ -0.86
SRRM1-223ENST00000600523 PSMB3P49720 205 aa9.68□□□□□ -0.86
SRRM1-223ENST00000600523 BPIFA4PQ86YQ2 179 aa9.68□□□□□ -0.86
SRRM1-223ENST00000600523 APRG1Q8IVJ8 170 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms