RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 TMEM147Q9BVK8 224 aa10.44□□□□□ -0.74
LIG1-218ENST00000599322 BATF3Q9NR55 127 aa10.44□□□□□ -0.74
LIG1-218ENST00000599322 SLC45A2Q9UMX9 530 aa10.44□□□□□ -0.74
LIG1-218ENST00000599322 A6NHS1 94 aa10.43□□□□□ -0.74
LIG1-218ENST00000599322 IL5P05113 134 aa10.43□□□□□ -0.74
LIG1-218ENST00000599322 SPP1P10451 314 aa10.43□□□□□ -0.74
LIG1-218ENST00000599322 ORM2P19652 201 aa10.43□□□□□ -0.74
LIG1-218ENST00000599322 GALR1P47211 349 aa10.43□□□□□ -0.74
LIG1-218ENST00000599322 BCAP31P51572 246 aa10.43□□□□□ -0.74
LIG1-218ENST00000599322 RAP2BP61225 183 aa10.43□□□□□ -0.74
LIG1-218ENST00000599322 SELENOTP62341 195 aa10.43□□□□□ -0.74
LIG1-218ENST00000599322 GSG1LQ6UXU4 331 aa10.43□□□□□ -0.74
LIG1-218ENST00000599322 ACOT7LQ6ZUV0 252 aa10.43□□□□□ -0.74
LIG1-218ENST00000599322 TMEM144Q7Z5S9 345 aa10.43□□□□□ -0.74
LIG1-218ENST00000599322 DCANP1Q8TF63 244 aa10.43□□□□□ -0.74
LIG1-218ENST00000599322 NPVFQ9HCQ7 196 aa10.43□□□□□ -0.74
LIG1-218ENST00000599322 BIRC6Q9NR09 4857 aa10.42□□□□□ -0.74
LIG1-218ENST00000599322 IGKV1D-37A0A075B6S9 117 aa10.42□□□□□ -0.74
LIG1-218ENST00000599322 METTL15P1P0C7V9 234 aa10.42□□□□□ -0.74
LIG1-218ENST00000599322 MEOX2P50222 304 aa10.42□□□□□ -0.74
LIG1-218ENST00000599322 DEFA1P59665 94 aa10.42□□□□□ -0.74
LIG1-218ENST00000599322 DEFA3P59666 94 aa10.42□□□□□ -0.74
LIG1-218ENST00000599322 DLK1P80370 383 aa10.42□□□□□ -0.74
LIG1-218ENST00000599322 ASAH1Q13510 395 aa10.42□□□□□ -0.74
LIG1-218ENST00000599322 ACTL10Q5JWF8 245 aa10.42□□□□□ -0.74
LIG1-218ENST00000599322 GPR82Q96P67 336 aa10.42□□□□□ -0.74
LIG1-218ENST00000599322 LSM5Q9Y4Y9 91 aaKnown RBP10.42□□□□□ -0.74
LIG1-218ENST00000599322 HYDINQ4G0P3 5121 aa10.41□□□□□ -0.74
LIG1-218ENST00000599322 A0A0J9YWU9 116 aa10.41□□□□□ -0.74
LIG1-218ENST00000599322 CXorf65A6NEN9 183 aa10.41□□□□□ -0.74
LIG1-218ENST00000599322 FNDC10F2Z333 226 aa10.41□□□□□ -0.74
LIG1-218ENST00000599322 UPK1BO75841 260 aa10.41□□□□□ -0.74
LIG1-218ENST00000599322 JTBO76095 146 aa10.41□□□□□ -0.74
LIG1-218ENST00000599322 RRAS2P62070 204 aaPredicted RBP10.41□□□□□ -0.74
LIG1-218ENST00000599322 RAB31Q13636 194 aa10.41□□□□□ -0.74
LIG1-218ENST00000599322 CYP2G1PQ6ZSU1 146 aa10.41□□□□□ -0.74
LIG1-218ENST00000599322 FAM24BQ8N5W8 94 aa10.41□□□□□ -0.74
LIG1-218ENST00000599322 OR1B1Q8NGR6 318 aa10.41□□□□□ -0.74
LIG1-218ENST00000599322 C2orf50Q96LR7 162 aa10.41□□□□□ -0.74
LIG1-218ENST00000599322 SEC22CQ9BRL7 303 aa10.41□□□□□ -0.74
LIG1-218ENST00000599322 GGACTQ9BVM4 153 aa10.41□□□□□ -0.74
LIG1-218ENST00000599322 C1QTNF4Q9BXJ3 329 aa10.41□□□□□ -0.74
LIG1-218ENST00000599322 SLC25A22Q9H936 323 aa10.41□□□□□ -0.74
LIG1-218ENST00000599322 KNCNA6PVL3 124 aa10.4□□□□□ -0.74
LIG1-218ENST00000599322 PRSS46E5RG02 174 aa10.4□□□□□ -0.74
LIG1-218ENST00000599322 CCSO14618 274 aa10.4□□□□□ -0.74
LIG1-218ENST00000599322 MBPP02686 304 aaPredicted RBP10.4□□□□□ -0.74
LIG1-218ENST00000599322 CAV2P51636 162 aa10.4□□□□□ -0.74
LIG1-218ENST00000599322 TEPPQ6URK8 271 aa10.4□□□□□ -0.74
LIG1-218ENST00000599322 TMEM14EPQ6UXP3 125 aa10.4□□□□□ -0.74
LIG1-218ENST00000599322 OR11H2Q8NH07 326 aa10.4□□□□□ -0.74
LIG1-218ENST00000599322 LINC00052Q96N35 136 aa10.4□□□□□ -0.74
LIG1-218ENST00000599322 RCL1Q9Y2P8 373 aaKnown RBP10.4□□□□□ -0.74
LIG1-218ENST00000599322 LCE6AA0A183 80 aa10.39□□□□□ -0.75
LIG1-218ENST00000599322 GOSR2O14653 212 aa10.39□□□□□ -0.75
LIG1-218ENST00000599322 HYPMO75409 117 aa10.39□□□□□ -0.75
LIG1-218ENST00000599322 RLN2P04090 185 aa10.39□□□□□ -0.75
LIG1-218ENST00000599322 OR5G3P0C626 314 aa10.39□□□□□ -0.75
LIG1-218ENST00000599322 ATF4P18848 351 aaPredicted RBP10.39□□□□□ -0.75
LIG1-218ENST00000599322 PSMB3P49720 205 aa10.39□□□□□ -0.75
LIG1-218ENST00000599322 S100A10P60903 97 aa10.39□□□□□ -0.75
LIG1-218ENST00000599322 EBLN2Q6P2I7 272 aa10.39□□□□□ -0.75
LIG1-218ENST00000599322 TRPT1Q86TN4 253 aaKnown RBP10.39□□□□□ -0.75
LIG1-218ENST00000599322 C16orf92Q96LL3 132 aa10.39□□□□□ -0.75
LIG1-218ENST00000599322 HIGD1AQ9Y241 93 aa10.39□□□□□ -0.75
LIG1-218ENST00000599322 IGKV1OR2-108A0A075B7D4 117 aa10.38□□□□□ -0.75
LIG1-218ENST00000599322 C7orf66A4D0T2 115 aa10.38□□□□□ -0.75
LIG1-218ENST00000599322 ZNF98A6NK75 572 aa10.38□□□□□ -0.75
LIG1-218ENST00000599322 ISLRO14498 428 aa10.38□□□□□ -0.75
LIG1-218ENST00000599322 PRAF2O60831 178 aa10.38□□□□□ -0.75
LIG1-218ENST00000599322 PAX9P55771 341 aa10.38□□□□□ -0.75
LIG1-218ENST00000599322 PXDC1Q5TGL8 231 aa10.38□□□□□ -0.75
LIG1-218ENST00000599322 SPATA31B1PQ5VZV4 182 aa10.38□□□□□ -0.75
LIG1-218ENST00000599322 ZNF546Q86UE3 836 aa10.38□□□□□ -0.75
LIG1-218ENST00000599322 MFFQ9GZY8 342 aa10.38□□□□□ -0.75
LIG1-218ENST00000599322 TBC1D24Q9ULP9 559 aa10.38□□□□□ -0.75
LIG1-218ENST00000599322 KLK5Q9Y337 293 aaPredicted RBP10.38□□□□□ -0.75
LIG1-218ENST00000599322 NUPR2A6NF83 97 aa10.37□□□□□ -0.75
LIG1-218ENST00000599322 K7EPK0 472 aa10.37□□□□□ -0.75
LIG1-218ENST00000599322 DEDDO75618 318 aa10.37□□□□□ -0.75
LIG1-218ENST00000599322 LINC00869P0C866 280 aa10.37□□□□□ -0.75
LIG1-218ENST00000599322 RPL7P18124 248 aaKnown RBP10.37□□□□□ -0.75
LIG1-218ENST00000599322 GATA2P23769 480 aaPredicted RBP10.37□□□□□ -0.75
LIG1-218ENST00000599322 HBG1P69891 147 aa10.37□□□□□ -0.75
LIG1-218ENST00000599322 HBG2P69892 147 aa10.37□□□□□ -0.75
LIG1-218ENST00000599322 PMS2P11Q13670 270 aa10.37□□□□□ -0.75
LIG1-218ENST00000599322 STX12Q86Y82 276 aa10.37□□□□□ -0.75
LIG1-218ENST00000599322 LRRC20Q8TCA0 184 aa10.37□□□□□ -0.75
LIG1-218ENST00000599322 RSG1Q9BU20 258 aa10.37□□□□□ -0.75
LIG1-218ENST00000599322 RPRMQ9NS64 109 aa10.37□□□□□ -0.75
LIG1-218ENST00000599322 DOK5Q9P104 306 aa10.37□□□□□ -0.75
LIG1-218ENST00000599322 PLECQ15149 4684 aaKnown RBP10.37□□□□□ -0.75
LIG1-218ENST00000599322 PMS2P5A8MQ11 134 aa10.36□□□□□ -0.75
LIG1-218ENST00000599322 INMT-MINDY4F8WBC2 141 aa10.36□□□□□ -0.75
LIG1-218ENST00000599322 CYCSP99999 105 aaKnown RBP10.36□□□□□ -0.75
LIG1-218ENST00000599322 FGL1Q08830 312 aa10.36□□□□□ -0.75
LIG1-218ENST00000599322 SLC38A11Q08AI6 406 aa10.36□□□□□ -0.75
LIG1-218ENST00000599322 ARL6Q9H0F7 186 aa10.36□□□□□ -0.75
LIG1-218ENST00000599322 MIFP14174 115 aa10.35□□□□□ -0.75
LIG1-218ENST00000599322 S100A11P31949 105 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms