RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 DEFB131AP59861 70 aa10.7□□□□□ -0.7
IRF3-223ENST00000599223 HSPE1P61604 102 aaKnown RBP10.7□□□□□ -0.7
IRF3-223ENST00000599223 C11orf45Q8TAV5 145 aa10.7□□□□□ -0.7
IRF3-223ENST00000599223 RAB40CQ96S21 281 aa10.7□□□□□ -0.7
IRF3-223ENST00000599223 RNF126Q9BV68 326 aa10.7□□□□□ -0.7
IRF3-223ENST00000599223 SLC25A31Q9H0C2 315 aa10.7□□□□□ -0.7
IRF3-223ENST00000599223 OR5AC2Q9NZP5 309 aa10.7□□□□□ -0.7
IRF3-223ENST00000599223 PAIP2BQ9ULR5 123 aaKnown RBP10.7□□□□□ -0.7
IRF3-223ENST00000599223 RCL1Q9Y2P8 373 aaKnown RBP10.7□□□□□ -0.7
IRF3-223ENST00000599223 PUS1Q9Y606 427 aaKnown RBP eCLIP10.7□□□□□ -0.7
IRF3-223ENST00000599223 TAAR5O14804 337 aa10.69□□□□□ -0.7
IRF3-223ENST00000599223 BCL2L11O43521 198 aa10.69□□□□□ -0.7
IRF3-223ENST00000599223 SSSCA1O60232 199 aa10.69□□□□□ -0.7
IRF3-223ENST00000599223 IFNA7P01567 189 aa10.69□□□□□ -0.7
IRF3-223ENST00000599223 RPL12P30050 165 aaKnown RBP10.69□□□□□ -0.7
IRF3-223ENST00000599223 EIF5AP63241 154 aaKnown RBP10.69□□□□□ -0.7
IRF3-223ENST00000599223 ID3Q02535 119 aa10.69□□□□□ -0.7
IRF3-223ENST00000599223 PVRIGQ6DKI7 326 aa10.69□□□□□ -0.7
IRF3-223ENST00000599223 Q8NAQ8 132 aa10.69□□□□□ -0.7
IRF3-223ENST00000599223 AQP10Q96PS8 301 aa10.69□□□□□ -0.7
IRF3-223ENST00000599223 ARPC5LQ9BPX5 153 aa10.69□□□□□ -0.7
IRF3-223ENST00000599223 GINS3Q9BRX5 216 aa10.69□□□□□ -0.7
IRF3-223ENST00000599223 H0YIZ8 118 aa10.68□□□□□ -0.7
IRF3-223ENST00000599223 PITX3O75364 302 aa10.68□□□□□ -0.7
IRF3-223ENST00000599223 RNASE2P10153 161 aaKnown RBP10.68□□□□□ -0.7
IRF3-223ENST00000599223 CAV2P51636 162 aa10.68□□□□□ -0.7
IRF3-223ENST00000599223 ZNF600Q6ZNG1 722 aa10.68□□□□□ -0.7
IRF3-223ENST00000599223 ZNF767PQ75MW2 155 aa10.68□□□□□ -0.7
IRF3-223ENST00000599223 SLC51BQ86UW2 128 aa10.68□□□□□ -0.7
IRF3-223ENST00000599223 CIB3Q96Q77 187 aaPredicted RBP10.68□□□□□ -0.7
IRF3-223ENST00000599223 FNDC4Q9H6D8 234 aaPredicted RBP10.68□□□□□ -0.7
IRF3-223ENST00000599223 A0A0G2JRQ6 117 aa10.67□□□□□ -0.7
IRF3-223ENST00000599223 SYNGR2O43760 224 aa10.67□□□□□ -0.7
IRF3-223ENST00000599223 CMC4P56277 68 aaPredicted RBP10.67□□□□□ -0.7
IRF3-223ENST00000599223 POLR2GP62487 172 aaKnown RBP eCLIP10.67□□□□□ -0.7
IRF3-223ENST00000599223 ERHP84090 104 aaKnown RBP10.67□□□□□ -0.7
IRF3-223ENST00000599223 STX12Q86Y82 276 aa10.67□□□□□ -0.7
IRF3-223ENST00000599223 MAGT1Q9H0U3 335 aa10.67□□□□□ -0.7
IRF3-223ENST00000599223 TRAV2A0A0B4J234 112 aa10.66□□□□□ -0.7
IRF3-223ENST00000599223 RNF222A6NCQ9 220 aa10.66□□□□□ -0.7
IRF3-223ENST00000599223 CEBPZOSA8MTT3 80 aa10.66□□□□□ -0.7
IRF3-223ENST00000599223 INS-IGF2F8WCM5 200 aa10.66□□□□□ -0.7
IRF3-223ENST00000599223 RGS13O14921 159 aa10.66□□□□□ -0.7
IRF3-223ENST00000599223 NXPH3O95157 252 aa10.66□□□□□ -0.7
IRF3-223ENST00000599223 TMEM50AO95807 157 aa10.66□□□□□ -0.7
IRF3-223ENST00000599223 IFNA17P01571 189 aa10.66□□□□□ -0.7
IRF3-223ENST00000599223 RBMY1A1P0DJD3 496 aaKnown RBP10.66□□□□□ -0.7
IRF3-223ENST00000599223 RBMY1CP0DJD4 496 aa10.66□□□□□ -0.7
IRF3-223ENST00000599223 TAS2R30P59541 319 aa10.66□□□□□ -0.7
IRF3-223ENST00000599223 PAFAH1B2P68402 229 aa10.66□□□□□ -0.7
IRF3-223ENST00000599223 RPP30P78346 268 aaKnown RBP10.66□□□□□ -0.7
IRF3-223ENST00000599223 RBMY1FQ15415 496 aaKnown RBP10.66□□□□□ -0.7
IRF3-223ENST00000599223 MLANAQ16655 118 aa10.66□□□□□ -0.7
IRF3-223ENST00000599223 TRPT1Q86TN4 253 aaKnown RBP10.66□□□□□ -0.7
IRF3-223ENST00000599223 ZNF471Q9BX82 626 aaPredicted RBP10.66□□□□□ -0.7
IRF3-223ENST00000599223 ENY2Q9NPA8 101 aa10.66□□□□□ -0.7
IRF3-223ENST00000599223 RABAC1Q9UI14 185 aa10.66□□□□□ -0.7
IRF3-223ENST00000599223 BORCS7-ASMTA0A0B4J1R7 106 aa10.65□□□□□ -0.7
IRF3-223ENST00000599223 IGHV4-28A0A0C4DH34 117 aa10.65□□□□□ -0.7
IRF3-223ENST00000599223 KNCNA6PVL3 124 aa10.65□□□□□ -0.7
IRF3-223ENST00000599223 K7EQG2 157 aa10.65□□□□□ -0.7
IRF3-223ENST00000599223 DNASE2O00115 360 aaPredicted RBP10.65□□□□□ -0.7
IRF3-223ENST00000599223 NPBWR1P48145 328 aa10.65□□□□□ -0.7
IRF3-223ENST00000599223 RAB14P61106 215 aa10.65□□□□□ -0.7
IRF3-223ENST00000599223 RPL11P62913 178 aaKnown RBP10.65□□□□□ -0.7
IRF3-223ENST00000599223 BAXQ07812 192 aa10.65□□□□□ -0.7
IRF3-223ENST00000599223 EIF5AL1Q6IS14 154 aaKnown RBP10.65□□□□□ -0.7
IRF3-223ENST00000599223 Q6ZRM9 215 aa10.65□□□□□ -0.7
IRF3-223ENST00000599223 STXBP6Q8NFX7 210 aa10.65□□□□□ -0.7
IRF3-223ENST00000599223 C2CD4CQ8TF44 421 aa10.65□□□□□ -0.7
IRF3-223ENST00000599223 LYRM2Q9NU23 88 aaPredicted RBP10.65□□□□□ -0.7
IRF3-223ENST00000599223 HSPB7Q9UBY9 170 aa10.65□□□□□ -0.7
IRF3-223ENST00000599223 APLNQ9ULZ1 77 aa10.65□□□□□ -0.7
IRF3-223ENST00000599223 IGKV1-17P01599 117 aa10.64□□□□□ -0.71
IRF3-223ENST00000599223 IFNA4P05014 189 aa10.64□□□□□ -0.71
IRF3-223ENST00000599223 CD5P06127 495 aa10.64□□□□□ -0.71
IRF3-223ENST00000599223 ZNF688P0C7X2 276 aa10.64□□□□□ -0.71
IRF3-223ENST00000599223 TPT1P13693 172 aaKnown RBP10.64□□□□□ -0.71
IRF3-223ENST00000599223 SNCAP37840 140 aa10.64□□□□□ -0.71
IRF3-223ENST00000599223 HOXA1P49639 335 aaPredicted RBP10.64□□□□□ -0.71
IRF3-223ENST00000599223 SPCS3P61009 180 aa10.64□□□□□ -0.71
IRF3-223ENST00000599223 BSXQ3C1V8 233 aa10.64□□□□□ -0.71
IRF3-223ENST00000599223 TEX261Q6UWH6 196 aa10.64□□□□□ -0.71
IRF3-223ENST00000599223 STHQ8IWL8 128 aa10.64□□□□□ -0.71
IRF3-223ENST00000599223 OR52E5Q8NH55 327 aa10.64□□□□□ -0.71
IRF3-223ENST00000599223 DCANP1Q8TF63 244 aa10.64□□□□□ -0.71
IRF3-223ENST00000599223 SMIM8Q96KF7 97 aa10.64□□□□□ -0.71
IRF3-223ENST00000599223 RBKSQ9H477 322 aa10.64□□□□□ -0.71
IRF3-223ENST00000599223 PSENENQ9NZ42 101 aa10.64□□□□□ -0.71
IRF3-223ENST00000599223 U3KQ87 197 aa10.64□□□□□ -0.71
IRF3-223ENST00000599223 X6R8D5 127 aa10.64□□□□□ -0.71
IRF3-223ENST00000599223 DNAH17Q9UFH2 4485 aa10.64□□□□□ -0.71
IRF3-223ENST00000599223 CLN5O75503 358 aa10.63□□□□□ -0.71
IRF3-223ENST00000599223 CRYBB3P26998 211 aa10.63□□□□□ -0.71
IRF3-223ENST00000599223 OPRK1P41145 380 aa10.63□□□□□ -0.71
IRF3-223ENST00000599223 HBG1P69891 147 aa10.63□□□□□ -0.71
IRF3-223ENST00000599223 HBG2P69892 147 aa10.63□□□□□ -0.71
IRF3-223ENST00000599223 IFITM2Q01629 132 aa10.63□□□□□ -0.71
IRF3-223ENST00000599223 TIGITQ495A1 244 aa10.63□□□□□ -0.71
IRF3-223ENST00000599223 DTD1Q8TEA8 209 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms