RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 C1orf159Q96HA4 380 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 SLC25A2Q9BXI2 301 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 PARD6GQ9BYG4 376 aaPredicted RBP10□□□□□ -0.81
USHBP1-207ENST00000597928 UBTD1Q9HAC8 227 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 RNF114Q9Y508 228 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 CSMD1Q96PZ7 3565 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 A0A1W2PS18 150 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 PPP1R27Q86WC6 154 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 PRSS33Q8NF86 280 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 ZNF503Q96F45 646 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 TIMD4Q96H15 378 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 TXNDC17Q9BRA2 123 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 PYGO2Q9BRQ0 406 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 TMEM133Q9H2Q1 129 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 EPDR1Q9UM22 224 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 GOLT1BQ9Y3E0 138 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 hDV102S1A0JD36 115 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 ZNF324O75467 553 aaPredicted RBP9.99□□□□□ -0.81
USHBP1-207ENST00000597928 FA2HQ7L5A8 372 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 OR8B3Q8NGG8 313 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 DDB2Q92466 427 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 C18orf15Q96N68 181 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 OR2T8A6NH00 312 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 NDUFS7O75251 213 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 GPX1P07203 203 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 OR5AL1P0C617 328 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 VWC2Q2TAL6 325 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 C2orf83Q53S99 150 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 UNQ5815/PRO19632Q6UWF5 114 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 NAA38Q9BRA0 125 aaKnown RBP9.99□□□□□ -0.81
USHBP1-207ENST00000597928 CLEC7AQ9BXN2 247 aa9.99□□□□□ -0.81
USHBP1-207ENST00000597928 IGLV3-9A0A075B6K5 115 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 ETFRF1Q6IPR1 90 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 PATE2Q6UY27 113 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 Q8TAT8 98 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 DIRC2Q96SL1 478 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 ZNF257Q9Y2Q1 563 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 ABCA2Q9BZC7 2435 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 IGHV2-26A0A0B4J1V2 119 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 A8MWL6 223 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 LHBP01229 141 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 CSN1S1P47710 185 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 CX3CL1P78423 397 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 TM4SF20Q53R12 229 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 C1orf194Q5T5A4 169 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 BET1LQ9NYM9 111 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 LEPROTL1O95214 131 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 NPSP0C0P6 89 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 CD99P14209 185 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 LOXP28300 417 aaPredicted RBP9.98□□□□□ -0.81
USHBP1-207ENST00000597928 MC5RP33032 325 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 NHLH1Q02575 133 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 Q71RC1 249 aaPredicted RBP9.98□□□□□ -0.81
USHBP1-207ENST00000597928 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.98□□□□□ -0.81
USHBP1-207ENST00000597928 NDUFA4L2Q9NRX3 87 aa9.98□□□□□ -0.81
USHBP1-207ENST00000597928 K7EQM0 130 aa9.97□□□□□ -0.81
USHBP1-207ENST00000597928 NUTF2P61970 127 aaKnown RBP9.97□□□□□ -0.81
USHBP1-207ENST00000597928 TMEM136Q6ZRR5 245 aa9.97□□□□□ -0.81
USHBP1-207ENST00000597928 NIT1Q86X76 327 aa9.97□□□□□ -0.81
USHBP1-207ENST00000597928 SPACA3Q8IXA5 215 aa9.97□□□□□ -0.81
USHBP1-207ENST00000597928 TSKUQ8WUA8 353 aa9.97□□□□□ -0.81
USHBP1-207ENST00000597928 A0A1W2PRE2 83 aa9.97□□□□□ -0.81
USHBP1-207ENST00000597928 IZUMO1RA6ND01 250 aa9.97□□□□□ -0.81
USHBP1-207ENST00000597928 C5orf17Q8NAS9 161 aa9.97□□□□□ -0.81
USHBP1-207ENST00000597928 AAMDCQ9H7C9 122 aa9.97□□□□□ -0.81
USHBP1-207ENST00000597928 DSCAML1Q8TD84 2053 aa9.97□□□□□ -0.81
USHBP1-207ENST00000597928 C20orf202A1L168 122 aa9.96□□□□□ -0.81
USHBP1-207ENST00000597928 SELENOTP62341 195 aa9.96□□□□□ -0.81
USHBP1-207ENST00000597928 LINC00173Q6ZV60 143 aa9.96□□□□□ -0.81
USHBP1-207ENST00000597928 ZNF329Q86UD4 541 aa9.96□□□□□ -0.81
USHBP1-207ENST00000597928 AP1S3Q96PC3 154 aa9.96□□□□□ -0.81
USHBP1-207ENST00000597928 OSTCQ9NRP0 149 aa9.96□□□□□ -0.81
USHBP1-207ENST00000597928 SVEP1Q4LDE5 3571 aa9.96□□□□□ -0.81
USHBP1-207ENST00000597928 THBDP07204 575 aa9.96□□□□□ -0.81
USHBP1-207ENST00000597928 KLHDC1Q8N7A1 406 aa9.96□□□□□ -0.81
USHBP1-207ENST00000597928 MIEN1Q9BRT3 115 aa9.96□□□□□ -0.81
USHBP1-207ENST00000597928 MT-ND6P03923 174 aa9.96□□□□□ -0.82
USHBP1-207ENST00000597928 FCER1GP30273 86 aa9.96□□□□□ -0.82
USHBP1-207ENST00000597928 LY6DQ14210 128 aa9.96□□□□□ -0.82
USHBP1-207ENST00000597928 GPR82Q96P67 336 aa9.96□□□□□ -0.82
USHBP1-207ENST00000597928 TP53TG3Q9ULZ0 132 aa9.96□□□□□ -0.82
USHBP1-207ENST00000597928 IGKV2-40A0A087WW87 121 aaPredicted RBP9.95□□□□□ -0.82
USHBP1-207ENST00000597928 IGHV1-3A0A0C4DH29 117 aa9.95□□□□□ -0.82
USHBP1-207ENST00000597928 C22orf46C9J442 243 aa9.95□□□□□ -0.82
USHBP1-207ENST00000597928 SMKR1H3BMG3 65 aa9.95□□□□□ -0.82
USHBP1-207ENST00000597928 IGKV2D-40P01614 121 aaPredicted RBP9.95□□□□□ -0.82
USHBP1-207ENST00000597928 TYMSP04818 313 aa9.95□□□□□ -0.82
USHBP1-207ENST00000597928 CLEC3BP05452 202 aa9.95□□□□□ -0.82
USHBP1-207ENST00000597928 APOBEC3AP31941 199 aaPredicted RBP9.95□□□□□ -0.82
USHBP1-207ENST00000597928 PIP4P1Q86T03 277 aa9.95□□□□□ -0.82
USHBP1-207ENST00000597928 RAXQ9Y2V3 346 aa9.95□□□□□ -0.82
USHBP1-207ENST00000597928 UFC1Q9Y3C8 167 aa9.95□□□□□ -0.82
USHBP1-207ENST00000597928 C1orf174Q8IYL3 243 aa9.95□□□□□ -0.82
USHBP1-207ENST00000597928 CACNG8Q8WXS5 425 aa9.95□□□□□ -0.82
USHBP1-207ENST00000597928 ZC2HC1AQ96GY0 325 aa9.95□□□□□ -0.82
USHBP1-207ENST00000597928 GNB1LQ9BYB4 327 aa9.95□□□□□ -0.82
USHBP1-207ENST00000597928 OR4C46A6NHA9 309 aa9.95□□□□□ -0.82
USHBP1-207ENST00000597928 NCR2O95944 276 aa9.95□□□□□ -0.82
USHBP1-207ENST00000597928 HBBP68871 147 aa9.95□□□□□ -0.82
USHBP1-207ENST00000597928 LRRK2Q5S007 2527 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms