RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 PHYHIPLQ96FC7 376 aa11.4□□□□□ -0.58
TRIM28-207ENST00000597136 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
TRIM28-207ENST00000597136 IGHV3OR16-8A0A075B7F1 116 aa11.39□□□□□ -0.59
TRIM28-207ENST00000597136 ELLP55199 621 aaPredicted RBP11.39□□□□□ -0.59
TRIM28-207ENST00000597136 LYZP61626 148 aa11.39□□□□□ -0.59
TRIM28-207ENST00000597136 GCSAMLQ5JQS6 135 aa11.39□□□□□ -0.59
TRIM28-207ENST00000597136 KPRPQ5T749 579 aaPredicted RBP11.39□□□□□ -0.59
TRIM28-207ENST00000597136 UNQ9165/PRO28630Q6UXU0 137 aa11.39□□□□□ -0.59
TRIM28-207ENST00000597136 ADAMTSL5Q6ZMM2 481 aa11.39□□□□□ -0.59
TRIM28-207ENST00000597136 OR9G4Q8NGQ1 327 aa11.39□□□□□ -0.59
TRIM28-207ENST00000597136 MCRIP2Q9BUT9 160 aaKnown RBP11.39□□□□□ -0.59
TRIM28-207ENST00000597136 TGP01266 2768 aa11.39□□□□□ -0.59
TRIM28-207ENST00000597136 HYPMO75409 117 aa11.38□□□□□ -0.59
TRIM28-207ENST00000597136 SAP30O75446 220 aa11.38□□□□□ -0.59
TRIM28-207ENST00000597136 ORM2P19652 201 aa11.38□□□□□ -0.59
TRIM28-207ENST00000597136 DEFA6Q01524 100 aa11.38□□□□□ -0.59
TRIM28-207ENST00000597136 C9orf66Q5T8R8 295 aa11.38□□□□□ -0.59
TRIM28-207ENST00000597136 PXDC1Q5TGL8 231 aa11.38□□□□□ -0.59
TRIM28-207ENST00000597136 TEX261Q6UWH6 196 aa11.38□□□□□ -0.59
TRIM28-207ENST00000597136 ALKAL2Q6UX46 152 aa11.38□□□□□ -0.59
TRIM28-207ENST00000597136 PATE2Q6UY27 113 aa11.38□□□□□ -0.59
TRIM28-207ENST00000597136 OR1B1Q8NGR6 318 aa11.38□□□□□ -0.59
TRIM28-207ENST00000597136 PBDC1Q9BVG4 233 aa11.38□□□□□ -0.59
TRIM28-207ENST00000597136 VSIRQ9H7M9 311 aa11.38□□□□□ -0.59
TRIM28-207ENST00000597136 DNAJC4Q9NNZ3 241 aa11.38□□□□□ -0.59
TRIM28-207ENST00000597136 DOK5Q9P104 306 aa11.38□□□□□ -0.59
TRIM28-207ENST00000597136 SELENOKQ9Y6D0 94 aa11.38□□□□□ -0.59
TRIM28-207ENST00000597136 ZNF320A2RRD8 509 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 WIPF1O43516 503 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 MBP02144 154 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 CSN3P07498 182 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 M6PRP20645 277 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 USF2Q15853 346 aaPredicted RBP11.37□□□□□ -0.59
TRIM28-207ENST00000597136 ACOT6Q3I5F7 207 aaPredicted RBP11.37□□□□□ -0.59
TRIM28-207ENST00000597136 TMEM37Q8WXS4 190 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 TMEM190Q8WZ59 177 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 C20orf24Q9BUV8 137 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 MRPL27Q9P0M9 148 aaKnown RBP11.37□□□□□ -0.59
TRIM28-207ENST00000597136 ELOA3CA0A087WX78 387 aaPredicted RBP11.37□□□□□ -0.59
TRIM28-207ENST00000597136 UMAD1C9J7I0 102 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 LGALS9O00182 355 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 COX7A2P2O60397 106 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 OR5G3P0C626 314 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 RAB2AP61019 212 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 TM4SF20Q53R12 229 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 TMEM41BQ5BJD5 291 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 AKR1C8PQ5T2L2 129 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 REC114Q7Z4M0 266 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 ZNF680Q8NEM1 530 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 OR1L4Q8NGR5 311 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 GATAD1Q8WUU5 269 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 RPRMQ9NS64 109 aa11.37□□□□□ -0.59
TRIM28-207ENST00000597136 IFITM2Q01629 132 aa11.36□□□□□ -0.59
TRIM28-207ENST00000597136 EGFEM1PQ0D2K5 195 aa11.36□□□□□ -0.59
TRIM28-207ENST00000597136 FAM74A1Q5RGS3 127 aa11.36□□□□□ -0.59
TRIM28-207ENST00000597136 C10orf113Q5VZT2 155 aa11.36□□□□□ -0.59
TRIM28-207ENST00000597136 RPP25LQ8N5L8 163 aaKnown RBP11.36□□□□□ -0.59
TRIM28-207ENST00000597136 OR10G4Q8NGN3 311 aa11.36□□□□□ -0.59
TRIM28-207ENST00000597136 OR10G9Q8NGN4 311 aa11.36□□□□□ -0.59
TRIM28-207ENST00000597136 OR10G7Q8NGN6 311 aa11.36□□□□□ -0.59
TRIM28-207ENST00000597136 PFDN5Q99471 154 aa11.36□□□□□ -0.59
TRIM28-207ENST00000597136 ELOVL1Q9BW60 279 aa11.36□□□□□ -0.59
TRIM28-207ENST00000597136 HIGD1AQ9Y241 93 aa11.36□□□□□ -0.59
TRIM28-207ENST00000597136 C2orf70A6NJV1 201 aa11.35□□□□□ -0.59
TRIM28-207ENST00000597136 ZNF207O43670 478 aaKnown RBP11.35□□□□□ -0.59
TRIM28-207ENST00000597136 SULT1A2P50226 295 aa11.35□□□□□ -0.59
TRIM28-207ENST00000597136 UHRF2Q96PU4 802 aa11.35□□□□□ -0.59
TRIM28-207ENST00000597136 DAZ1Q9NQZ3 744 aaKnown RBP11.35□□□□□ -0.59
TRIM28-207ENST00000597136 RABAC1Q9UI14 185 aa11.35□□□□□ -0.59
TRIM28-207ENST00000597136 UFC1Q9Y3C8 167 aa11.35□□□□□ -0.59
TRIM28-207ENST00000597136 PRKDCP78527 4128 aaKnown RBP11.34□□□□□ -0.59
TRIM28-207ENST00000597136 TMEM213A2RRL7 107 aa11.34□□□□□ -0.59
TRIM28-207ENST00000597136 A8MWP6 167 aa11.34□□□□□ -0.59
TRIM28-207ENST00000597136 K7EMT4 169 aa11.34□□□□□ -0.59
TRIM28-207ENST00000597136 IFNA7P01567 189 aa11.34□□□□□ -0.59
TRIM28-207ENST00000597136 FOLR2P14207 255 aa11.34□□□□□ -0.59
TRIM28-207ENST00000597136 NPPCP23582 126 aa11.34□□□□□ -0.59
TRIM28-207ENST00000597136 CRYBB3P26998 211 aa11.34□□□□□ -0.59
TRIM28-207ENST00000597136 FHITP49789 147 aa11.34□□□□□ -0.59
TRIM28-207ENST00000597136 RAB5CP51148 216 aa11.34□□□□□ -0.59
TRIM28-207ENST00000597136 LINC00305Q7Z4B0 112 aa11.34□□□□□ -0.59
TRIM28-207ENST00000597136 METTL26Q96S19 204 aa11.34□□□□□ -0.59
TRIM28-207ENST00000597136 SLC25A39Q9BZJ4 359 aaPredicted RBP11.34□□□□□ -0.59
TRIM28-207ENST00000597136 SEPSECSQ9HD40 501 aaKnown RBP11.34□□□□□ -0.59
TRIM28-207ENST00000597136 IZUMO1RA6ND01 250 aa11.33□□□□□ -0.6
TRIM28-207ENST00000597136 IGLV1-51P01701 117 aa11.33□□□□□ -0.6
TRIM28-207ENST00000597136 INSL3P51460 131 aa11.33□□□□□ -0.6
TRIM28-207ENST00000597136 RHOBP62745 196 aa11.33□□□□□ -0.6
TRIM28-207ENST00000597136 FAM78BQ5VT40 261 aa11.33□□□□□ -0.6
TRIM28-207ENST00000597136 MORN5Q5VZ52 161 aa11.33□□□□□ -0.6
TRIM28-207ENST00000597136 FAM122CQ6P4D5 195 aa11.33□□□□□ -0.6
TRIM28-207ENST00000597136 RNF2Q99496 336 aa11.33□□□□□ -0.6
TRIM28-207ENST00000597136 GPR61Q9BZJ8 451 aa11.33□□□□□ -0.6
TRIM28-207ENST00000597136 PEMTQ9UBM1 199 aa11.33□□□□□ -0.6
TRIM28-207ENST00000597136 U3KQE9 123 aa11.33□□□□□ -0.6
TRIM28-207ENST00000597136 H3BRN7 92 aa11.33□□□□□ -0.6
TRIM28-207ENST00000597136 APOHP02749 345 aaPredicted RBP11.33□□□□□ -0.6
TRIM28-207ENST00000597136 CBLN1P23435 193 aa11.33□□□□□ -0.6
TRIM28-207ENST00000597136 SPATA31B1PQ5VZV4 182 aa11.33□□□□□ -0.6
TRIM28-207ENST00000597136 DPPA3Q6W0C5 159 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms