RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 FGL1Q08830 312 aa10.74□□□□□ -0.69
LIG1-208ENST00000595758 ZNF546Q86UE3 836 aa10.74□□□□□ -0.69
LIG1-208ENST00000595758 OR1B1Q8NGR6 318 aa10.74□□□□□ -0.69
LIG1-208ENST00000595758 GLMPQ8WWB7 406 aa10.74□□□□□ -0.69
LIG1-208ENST00000595758 MGST2Q99735 147 aa10.74□□□□□ -0.69
LIG1-208ENST00000595758 MS4A6AQ9H2W1 248 aa10.74□□□□□ -0.69
LIG1-208ENST00000595758 SLC45A2Q9UMX9 530 aa10.74□□□□□ -0.69
LIG1-208ENST00000595758 OR11H12B2RN74 326 aa10.73□□□□□ -0.69
LIG1-208ENST00000595758 DNASE2O00115 360 aaPredicted RBP10.73□□□□□ -0.69
LIG1-208ENST00000595758 HYPMO75409 117 aa10.73□□□□□ -0.69
LIG1-208ENST00000595758 IGHV4-30-4P0DP06 118 aa10.73□□□□□ -0.69
LIG1-208ENST00000595758 S100A7P31151 101 aa10.73□□□□□ -0.69
LIG1-208ENST00000595758 AP2S1P53680 142 aaPredicted RBP10.73□□□□□ -0.69
LIG1-208ENST00000595758 CLINT1Q14677 625 aa10.73□□□□□ -0.69
LIG1-208ENST00000595758 C1orf194Q5T5A4 169 aa10.73□□□□□ -0.69
LIG1-208ENST00000595758 WFDC3Q8IUB2 231 aa10.73□□□□□ -0.69
LIG1-208ENST00000595758 STPG3Q8N7X2 389 aa10.73□□□□□ -0.69
LIG1-208ENST00000595758 TUBA4BQ9H853 241 aa10.73□□□□□ -0.69
LIG1-208ENST00000595758 DOK5Q9P104 306 aa10.73□□□□□ -0.69
LIG1-208ENST00000595758 HSPB11Q9Y547 144 aa10.73□□□□□ -0.69
LIG1-208ENST00000595758 A8MZ25 164 aa10.72□□□□□ -0.69
LIG1-208ENST00000595758 FRMD6-AS1P0C7T7 363 aa10.72□□□□□ -0.69
LIG1-208ENST00000595758 FGF7P21781 194 aa10.72□□□□□ -0.69
LIG1-208ENST00000595758 PLP1P60201 277 aa10.72□□□□□ -0.69
LIG1-208ENST00000595758 Q5BKY6 102 aa10.72□□□□□ -0.69
LIG1-208ENST00000595758 DEFB125Q8N687 156 aa10.72□□□□□ -0.69
LIG1-208ENST00000595758 STXBP6Q8NFX7 210 aa10.72□□□□□ -0.69
LIG1-208ENST00000595758 B9D2Q9BPU9 175 aa10.72□□□□□ -0.69
LIG1-208ENST00000595758 ARL6Q9H0F7 186 aa10.72□□□□□ -0.69
LIG1-208ENST00000595758 WFDC10AQ9H1F0 79 aa10.72□□□□□ -0.69
LIG1-208ENST00000595758 C19orf73Q9NVV2 129 aa10.72□□□□□ -0.69
LIG1-208ENST00000595758 HIGD1AQ9Y241 93 aa10.72□□□□□ -0.69
LIG1-208ENST00000595758 TRAV2A0A0B4J234 112 aa10.71□□□□□ -0.69
LIG1-208ENST00000595758 MPDU1O75352 247 aa10.71□□□□□ -0.69
LIG1-208ENST00000595758 OR5G3P0C626 314 aa10.71□□□□□ -0.69
LIG1-208ENST00000595758 CMC4P56277 68 aaPredicted RBP10.71□□□□□ -0.69
LIG1-208ENST00000595758 PXDC1Q5TGL8 231 aa10.71□□□□□ -0.69
LIG1-208ENST00000595758 SIGLEC15Q6ZMC9 328 aa10.71□□□□□ -0.69
LIG1-208ENST00000595758 S100A7AQ86SG5 101 aa10.71□□□□□ -0.69
LIG1-208ENST00000595758 OR8I2Q8N0Y5 310 aa10.71□□□□□ -0.69
LIG1-208ENST00000595758 OR2T35Q8NGX2 323 aa10.71□□□□□ -0.69
LIG1-208ENST00000595758 CHAC2Q8WUX2 184 aa10.71□□□□□ -0.69
LIG1-208ENST00000595758 GGTLC1Q9BX51 225 aa10.71□□□□□ -0.69
LIG1-208ENST00000595758 FBXL17Q9UF56 701 aa10.71□□□□□ -0.69
LIG1-208ENST00000595758 UBQLN2Q9UHD9 624 aa10.71□□□□□ -0.69
LIG1-208ENST00000595758 TGP01266 2768 aa10.7□□□□□ -0.7
LIG1-208ENST00000595758 ZNF98A6NK75 572 aa10.7□□□□□ -0.7
LIG1-208ENST00000595758 ODF3L2Q3SX64 289 aa10.7□□□□□ -0.7
LIG1-208ENST00000595758 MIC13Q5XKP0 118 aa10.7□□□□□ -0.7
LIG1-208ENST00000595758 ATP5SQ99766 215 aa10.7□□□□□ -0.7
LIG1-208ENST00000595758 FAM110AQ9BQ89 295 aa10.7□□□□□ -0.7
LIG1-208ENST00000595758 SHANK2-AS3Q9BTD1 123 aa10.7□□□□□ -0.7
LIG1-208ENST00000595758 SLC25A39Q9BZJ4 359 aaPredicted RBP10.7□□□□□ -0.7
LIG1-208ENST00000595758 SMIM3Q9BZL3 60 aa10.7□□□□□ -0.7
LIG1-208ENST00000595758 SRD5A3Q9H8P0 318 aa10.7□□□□□ -0.7
LIG1-208ENST00000595758 K7EQG2 157 aa10.69□□□□□ -0.7
LIG1-208ENST00000595758 COX7A2P2O60397 106 aa10.69□□□□□ -0.7
LIG1-208ENST00000595758 RPL29P47914 159 aaKnown RBP10.69□□□□□ -0.7
LIG1-208ENST00000595758 PRR20EP86478 221 aa10.69□□□□□ -0.7
LIG1-208ENST00000595758 PRR20CP86479 221 aa10.69□□□□□ -0.7
LIG1-208ENST00000595758 PRR20DP86480 221 aa10.69□□□□□ -0.7
LIG1-208ENST00000595758 PRR20BP86481 221 aa10.69□□□□□ -0.7
LIG1-208ENST00000595758 PRR20AP86496 221 aa10.69□□□□□ -0.7
LIG1-208ENST00000595758 OPCMLQ14982 345 aa10.69□□□□□ -0.7
LIG1-208ENST00000595758 PATE2Q6UY27 113 aa10.69□□□□□ -0.7
LIG1-208ENST00000595758 Q6ZRG5 221 aa10.69□□□□□ -0.7
LIG1-208ENST00000595758 ASCL2Q99929 193 aa10.69□□□□□ -0.7
LIG1-208ENST00000595758 SCRT1Q9BWW7 348 aa10.69□□□□□ -0.7
LIG1-208ENST00000595758 ARV1Q9H2C2 271 aa10.69□□□□□ -0.7
LIG1-208ENST00000595758 SLC25A22Q9H936 323 aa10.69□□□□□ -0.7
LIG1-208ENST00000595758 NRN1Q9NPD7 142 aa10.69□□□□□ -0.7
LIG1-208ENST00000595758 ELOA3CA0A087WX78 387 aaPredicted RBP10.68□□□□□ -0.7
LIG1-208ENST00000595758 H3BRN7 92 aa10.68□□□□□ -0.7
LIG1-208ENST00000595758 IFNA5P01569 189 aa10.68□□□□□ -0.7
LIG1-208ENST00000595758 B2MP61769 119 aa10.68□□□□□ -0.7
LIG1-208ENST00000595758 LEMD1Q68G75 181 aa10.68□□□□□ -0.7
LIG1-208ENST00000595758 ZNF709Q8N972 641 aa10.68□□□□□ -0.7
LIG1-208ENST00000595758 DCANP1Q8TF63 244 aa10.68□□□□□ -0.7
LIG1-208ENST00000595758 GPR82Q96P67 336 aa10.68□□□□□ -0.7
LIG1-208ENST00000595758 AQP10Q96PS8 301 aa10.68□□□□□ -0.7
LIG1-208ENST00000595758 UHRF2Q96PU4 802 aa10.68□□□□□ -0.7
LIG1-208ENST00000595758 NPCDR1Q9BY65 106 aa10.68□□□□□ -0.7
LIG1-208ENST00000595758 WDR61Q9GZS3 305 aaKnown RBP10.68□□□□□ -0.7
LIG1-208ENST00000595758 SLC25A32Q9H2D1 315 aa10.68□□□□□ -0.7
LIG1-208ENST00000595758 DNAJC4Q9NNZ3 241 aa10.68□□□□□ -0.7
LIG1-208ENST00000595758 SLC39A9Q9NUM3 307 aa10.68□□□□□ -0.7
LIG1-208ENST00000595758 PXMP4Q9Y6I8 212 aa10.68□□□□□ -0.7
LIG1-208ENST00000595758 FXYD6-FXYD2A0A087WZ82 144 aa10.67□□□□□ -0.7
LIG1-208ENST00000595758 GALR1P47211 349 aa10.67□□□□□ -0.7
LIG1-208ENST00000595758 C10orf113Q5VZT2 155 aa10.67□□□□□ -0.7
LIG1-208ENST00000595758 Q6ZNX1 250 aa10.67□□□□□ -0.7
LIG1-208ENST00000595758 APRG1Q8IVJ8 170 aa10.67□□□□□ -0.7
LIG1-208ENST00000595758 SBSPONQ8IVN8 264 aa10.67□□□□□ -0.7
LIG1-208ENST00000595758 FAM24BQ8N5W8 94 aa10.67□□□□□ -0.7
LIG1-208ENST00000595758 INO80EQ8NBZ0 244 aaPredicted RBP10.67□□□□□ -0.7
LIG1-208ENST00000595758 OR1L4Q8NGR5 311 aa10.67□□□□□ -0.7
LIG1-208ENST00000595758 SCGB1C1Q8TD33 95 aa10.67□□□□□ -0.7
LIG1-208ENST00000595758 TMEM37Q8WXS4 190 aa10.67□□□□□ -0.7
LIG1-208ENST00000595758 MAP6D1Q9H9H5 199 aa10.67□□□□□ -0.7
LIG1-208ENST00000595758 WFDC1Q9HC57 220 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms