RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 KNCNA6PVL3 124 aa11.06□□□□□ -0.64
TRIM28-205ENST00000595028 TSC22D2O75157 780 aa11.06□□□□□ -0.64
TRIM28-205ENST00000595028 CCNKO75909 580 aa11.06□□□□□ -0.64
TRIM28-205ENST00000595028 MBPP02686 304 aaPredicted RBP11.06□□□□□ -0.64
TRIM28-205ENST00000595028 TAS2R30P59541 319 aa11.06□□□□□ -0.64
TRIM28-205ENST00000595028 SNRPD3P62318 126 aaKnown RBP11.06□□□□□ -0.64
TRIM28-205ENST00000595028 ZNF846Q147U1 533 aa11.06□□□□□ -0.64
TRIM28-205ENST00000595028 C1orf194Q5T5A4 169 aa11.06□□□□□ -0.64
TRIM28-205ENST00000595028 TMEM144Q7Z5S9 345 aa11.06□□□□□ -0.64
TRIM28-205ENST00000595028 BPIFCQ8NFQ6 507 aa11.06□□□□□ -0.64
TRIM28-205ENST00000595028 PPP1R14BQ96C90 147 aa11.06□□□□□ -0.64
TRIM28-205ENST00000595028 FBXL17Q9UF56 701 aa11.06□□□□□ -0.64
TRIM28-205ENST00000595028 SLC45A2Q9UMX9 530 aa11.06□□□□□ -0.64
TRIM28-205ENST00000595028 FAM25EA8MYX2 175 aa11.05□□□□□ -0.64
TRIM28-205ENST00000595028 UPK1BO75841 260 aa11.05□□□□□ -0.64
TRIM28-205ENST00000595028 METTL15P1P0C7V9 234 aa11.05□□□□□ -0.64
TRIM28-205ENST00000595028 GATA2P23769 480 aaPredicted RBP11.05□□□□□ -0.64
TRIM28-205ENST00000595028 DLK1P80370 383 aa11.05□□□□□ -0.64
TRIM28-205ENST00000595028 EWSR1Q01844 656 aaKnown RBP eCLIP11.05□□□□□ -0.64
TRIM28-205ENST00000595028 ACTL10Q5JWF8 245 aa11.05□□□□□ -0.64
TRIM28-205ENST00000595028 C12orf45Q8N5I9 185 aaPredicted RBP11.05□□□□□ -0.64
TRIM28-205ENST00000595028 C7orf66A4D0T2 115 aa11.04□□□□□ -0.64
TRIM28-205ENST00000595028 FNDC10F2Z333 226 aa11.04□□□□□ -0.64
TRIM28-205ENST00000595028 SPP1P10451 314 aa11.04□□□□□ -0.64
TRIM28-205ENST00000595028 ATF4P18848 351 aaPredicted RBP11.04□□□□□ -0.64
TRIM28-205ENST00000595028 C4BPBP20851 252 aa11.04□□□□□ -0.64
TRIM28-205ENST00000595028 RRAS2P62070 204 aaPredicted RBP11.04□□□□□ -0.64
TRIM28-205ENST00000595028 MORN3Q6PF18 240 aaPredicted RBP11.04□□□□□ -0.64
TRIM28-205ENST00000595028 TMEM182Q6ZP80 229 aaPredicted RBP11.04□□□□□ -0.64
TRIM28-205ENST00000595028 ENKURQ8TC29 256 aa11.04□□□□□ -0.64
TRIM28-205ENST00000595028 C5orf51A6NDU8 294 aa11.03□□□□□ -0.64
TRIM28-205ENST00000595028 SOCS3O14543 225 aa11.03□□□□□ -0.64
TRIM28-205ENST00000595028 GIG44P09565 113 aaPredicted RBP11.03□□□□□ -0.64
TRIM28-205ENST00000595028 TMEM41BQ5BJD5 291 aa11.03□□□□□ -0.64
TRIM28-205ENST00000595028 CYP2G1PQ6ZSU1 146 aa11.03□□□□□ -0.64
TRIM28-205ENST00000595028 OR8I2Q8N0Y5 310 aa11.03□□□□□ -0.64
TRIM28-205ENST00000595028 TMEM217Q8N7C4 229 aa11.03□□□□□ -0.64
TRIM28-205ENST00000595028 OR10P1Q8NGE3 313 aa11.03□□□□□ -0.64
TRIM28-205ENST00000595028 OR11H2Q8NH07 326 aa11.03□□□□□ -0.64
TRIM28-205ENST00000595028 RARRES2Q99969 163 aa11.03□□□□□ -0.64
TRIM28-205ENST00000595028 SLC25A32Q9H2D1 315 aa11.03□□□□□ -0.64
TRIM28-205ENST00000595028 C11orf68Q9H3H3 251 aaKnown RBP11.03□□□□□ -0.64
TRIM28-205ENST00000595028 MGAT4CQ9UBM8 478 aa11.03□□□□□ -0.64
TRIM28-205ENST00000595028 K7EPK0 472 aa11.02□□□□□ -0.65
TRIM28-205ENST00000595028 L7N2F9 121 aa11.02□□□□□ -0.65
TRIM28-205ENST00000595028 JTBO76095 146 aa11.02□□□□□ -0.65
TRIM28-205ENST00000595028 IL5P05113 134 aa11.02□□□□□ -0.65
TRIM28-205ENST00000595028 ORM2P19652 201 aa11.02□□□□□ -0.65
TRIM28-205ENST00000595028 PSMB3P49720 205 aa11.02□□□□□ -0.65
TRIM28-205ENST00000595028 VAMP2P63027 116 aa11.02□□□□□ -0.65
TRIM28-205ENST00000595028 IFITM3Q01628 133 aa11.02□□□□□ -0.65
TRIM28-205ENST00000595028 OR1B1Q8NGR6 318 aa11.02□□□□□ -0.65
TRIM28-205ENST00000595028 C2orf50Q96LR7 162 aa11.02□□□□□ -0.65
TRIM28-205ENST00000595028 TMEM147Q9BVK8 224 aa11.02□□□□□ -0.65
TRIM28-205ENST00000595028 LSM5Q9Y4Y9 91 aaKnown RBP11.02□□□□□ -0.65
TRIM28-205ENST00000595028 ZNF98A6NK75 572 aa11.01□□□□□ -0.65
TRIM28-205ENST00000595028 H3BRN7 92 aa11.01□□□□□ -0.65
TRIM28-205ENST00000595028 LINC00869P0C866 280 aa11.01□□□□□ -0.65
TRIM28-205ENST00000595028 HLA-DRB4P13762 266 aa11.01□□□□□ -0.65
TRIM28-205ENST00000595028 S100A7P31151 101 aa11.01□□□□□ -0.65
TRIM28-205ENST00000595028 ID1P41134 155 aa11.01□□□□□ -0.65
TRIM28-205ENST00000595028 GALR1P47211 349 aa11.01□□□□□ -0.65
TRIM28-205ENST00000595028 SELENOTP62341 195 aa11.01□□□□□ -0.65
TRIM28-205ENST00000595028 ARL16Q0P5N6 197 aa11.01□□□□□ -0.65
TRIM28-205ENST00000595028 PMS2P11Q13670 270 aa11.01□□□□□ -0.65
TRIM28-205ENST00000595028 SAMD13Q5VXD3 122 aa11.01□□□□□ -0.65
TRIM28-205ENST00000595028 GSG1LQ6UXU4 331 aa11.01□□□□□ -0.65
TRIM28-205ENST00000595028 C11orf1Q9H5F2 150 aa11.01□□□□□ -0.65
TRIM28-205ENST00000595028 SLC25A22Q9H936 323 aa11.01□□□□□ -0.65
TRIM28-205ENST00000595028 NPVFQ9HCQ7 196 aa11.01□□□□□ -0.65
TRIM28-205ENST00000595028 DOK5Q9P104 306 aa11.01□□□□□ -0.65
TRIM28-205ENST00000595028 HLA-DRB4X5D2U9 266 aa11.01□□□□□ -0.65
TRIM28-205ENST00000595028 KIAA1109Q2LD37 5005 aa11□□□□□ -0.65
TRIM28-205ENST00000595028 CXorf65A6NEN9 183 aa11□□□□□ -0.65
TRIM28-205ENST00000595028 ISLRO14498 428 aa11□□□□□ -0.65
TRIM28-205ENST00000595028 MEOX2P50222 304 aa11□□□□□ -0.65
TRIM28-205ENST00000595028 PLP1P60201 277 aa11□□□□□ -0.65
TRIM28-205ENST00000595028 SLC38A11Q08AI6 406 aa11□□□□□ -0.65
TRIM28-205ENST00000595028 TEPPQ6URK8 271 aa11□□□□□ -0.65
TRIM28-205ENST00000595028 GPR82Q96P67 336 aa11□□□□□ -0.65
TRIM28-205ENST00000595028 GGACTQ9BVM4 153 aa11□□□□□ -0.65
TRIM28-205ENST00000595028 SCRT1Q9BWW7 348 aa11□□□□□ -0.65
TRIM28-205ENST00000595028 HECTD4Q9Y4D8 3996 aa10.99□□□□□ -0.65
TRIM28-205ENST00000595028 NUPR2A6NF83 97 aa10.99□□□□□ -0.65
TRIM28-205ENST00000595028 H3BMM0 161 aa10.99□□□□□ -0.65
TRIM28-205ENST00000595028 DEDDO75618 318 aa10.99□□□□□ -0.65
TRIM28-205ENST00000595028 BCAP31P51572 246 aa10.99□□□□□ -0.65
TRIM28-205ENST00000595028 CAV2P51636 162 aa10.99□□□□□ -0.65
TRIM28-205ENST00000595028 DEFB1P60022 68 aa10.99□□□□□ -0.65
TRIM28-205ENST00000595028 S100A10P60903 97 aa10.99□□□□□ -0.65
TRIM28-205ENST00000595028 RAP2BP61225 183 aa10.99□□□□□ -0.65
TRIM28-205ENST00000595028 IL15RAQ13261 267 aa10.99□□□□□ -0.65
TRIM28-205ENST00000595028 FOXI2Q6ZQN5 318 aa10.99□□□□□ -0.65
TRIM28-205ENST00000595028 NRARPQ7Z6K4 114 aa10.99□□□□□ -0.65
TRIM28-205ENST00000595028 ZNF546Q86UE3 836 aa10.99□□□□□ -0.65
TRIM28-205ENST00000595028 C17orf77Q96MU5 243 aa10.99□□□□□ -0.65
TRIM28-205ENST00000595028 LINC00052Q96N35 136 aa10.99□□□□□ -0.65
TRIM28-205ENST00000595028 SHANK2-AS3Q9BTD1 123 aa10.99□□□□□ -0.65
TRIM28-205ENST00000595028 SLC25A39Q9BZJ4 359 aaPredicted RBP10.99□□□□□ -0.65
TRIM28-205ENST00000595028 GPN1Q9HCN4 374 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms