RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 SPTAN1Q13813 2472 aaKnown RBP13.71□□□□□ -0.21
SHKBP1-205ENST00000594973 PPIAL4CA0A0B4J2A2 164 aa13.71□□□□□ -0.21
SHKBP1-205ENST00000594973 ENSAO43768 121 aaKnown RBP13.71□□□□□ -0.21
SHKBP1-205ENST00000594973 SPINK4O60575 86 aa13.71□□□□□ -0.21
SHKBP1-205ENST00000594973 PPIAL4GP0DN37 164 aa13.71□□□□□ -0.21
SHKBP1-205ENST00000594973 PAX2Q02962 417 aa13.71□□□□□ -0.21
SHKBP1-205ENST00000594973 TMEM177Q53S58 311 aa13.71□□□□□ -0.21
SHKBP1-205ENST00000594973 CENPWQ5EE01 88 aa13.71□□□□□ -0.21
SHKBP1-205ENST00000594973 MIC13Q5XKP0 118 aa13.71□□□□□ -0.21
SHKBP1-205ENST00000594973 RITA1Q96K30 269 aa13.71□□□□□ -0.21
SHKBP1-205ENST00000594973 TMEM70Q9BUB7 260 aa13.71□□□□□ -0.21
SHKBP1-205ENST00000594973 COMMD5Q9GZQ3 224 aa13.71□□□□□ -0.21
SHKBP1-205ENST00000594973 ZNF331Q9NQX6 463 aaPredicted RBP13.71□□□□□ -0.21
SHKBP1-205ENST00000594973 MUC21A0A0G2JKD1 596 aa13.7□□□□□ -0.22
SHKBP1-205ENST00000594973 MUC21A0A140T8X8 626 aa13.7□□□□□ -0.22
SHKBP1-205ENST00000594973 HELTA6NFD8 242 aa13.7□□□□□ -0.22
SHKBP1-205ENST00000594973 G3V4G9 280 aa13.7□□□□□ -0.22
SHKBP1-205ENST00000594973 COX7A1P24310 79 aa13.7□□□□□ -0.22
SHKBP1-205ENST00000594973 BMI1P35226 326 aa13.7□□□□□ -0.22
SHKBP1-205ENST00000594973 RPL8P62917 257 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-205ENST00000594973 MUC21Q5SSG8 566 aa13.7□□□□□ -0.22
SHKBP1-205ENST00000594973 FAM162BQ5T6X4 162 aa13.7□□□□□ -0.22
SHKBP1-205ENST00000594973 NPVFQ9HCQ7 196 aa13.7□□□□□ -0.22
SHKBP1-205ENST00000594973 USF1P22415 310 aaPredicted RBP13.7□□□□□ -0.22
SHKBP1-205ENST00000594973 CRYBB3P26998 211 aa13.7□□□□□ -0.22
SHKBP1-205ENST00000594973 TIGITQ495A1 244 aa13.7□□□□□ -0.22
SHKBP1-205ENST00000594973 PDPNQ86YL7 162 aa13.7□□□□□ -0.22
SHKBP1-205ENST00000594973 C1orf159Q96HA4 380 aa13.7□□□□□ -0.22
SHKBP1-205ENST00000594973 GGTLC1Q9BX51 225 aa13.7□□□□□ -0.22
SHKBP1-205ENST00000594973 E7EUB6 86 aa13.69□□□□□ -0.22
SHKBP1-205ENST00000594973 GNLYP22749 145 aa13.69□□□□□ -0.22
SHKBP1-205ENST00000594973 MRPL54Q6P161 138 aaKnown RBP13.69□□□□□ -0.22
SHKBP1-205ENST00000594973 FER1L6-AS1Q8NA97 138 aa13.69□□□□□ -0.22
SHKBP1-205ENST00000594973 ONECUT1Q9UBC0 465 aa13.69□□□□□ -0.22
SHKBP1-205ENST00000594973 A0A1W2PPR1 153 aa13.69□□□□□ -0.22
SHKBP1-205ENST00000594973 OR4C46A6NHA9 309 aa13.69□□□□□ -0.22
SHKBP1-205ENST00000594973 RIPPLY3P57055 190 aa13.69□□□□□ -0.22
SHKBP1-205ENST00000594973 C10orf55Q5SWW7 151 aa13.69□□□□□ -0.22
SHKBP1-205ENST00000594973 C11orf71Q6IPW1 123 aa13.69□□□□□ -0.22
SHKBP1-205ENST00000594973 MOB3BQ86TA1 216 aa13.69□□□□□ -0.22
SHKBP1-205ENST00000594973 SLC25A17O43808 307 aa13.68□□□□□ -0.22
SHKBP1-205ENST00000594973 ZNF137PP52743 207 aa13.68□□□□□ -0.22
SHKBP1-205ENST00000594973 SLAQ13239 276 aa13.68□□□□□ -0.22
SHKBP1-205ENST00000594973 TEPPQ6URK8 271 aa13.68□□□□□ -0.22
SHKBP1-205ENST00000594973 RNASE7Q9H1E1 156 aaKnown RBP13.68□□□□□ -0.22
SHKBP1-205ENST00000594973 TNFRSF19Q9NS68 423 aa13.68□□□□□ -0.22
SHKBP1-205ENST00000594973 LSM4Q9Y4Z0 139 aaKnown RBP13.68□□□□□ -0.22
SHKBP1-205ENST00000594973 AKAP6Q13023 2319 aa13.68□□□□□ -0.22
SHKBP1-205ENST00000594973 ACACBO00763 2458 aa13.68□□□□□ -0.22
SHKBP1-205ENST00000594973 TRAV8-6A0A0B4J262 113 aa13.68□□□□□ -0.22
SHKBP1-205ENST00000594973 OR7C2O60412 319 aa13.68□□□□□ -0.22
SHKBP1-205ENST00000594973 PQLC2Q6ZP29 291 aa13.68□□□□□ -0.22
SHKBP1-205ENST00000594973 TIMD4Q96H15 378 aa13.68□□□□□ -0.22
SHKBP1-205ENST00000594973 TPSG1Q9NRR2 321 aa13.68□□□□□ -0.22
SHKBP1-205ENST00000594973 TECRQ9NZ01 308 aaKnown RBP13.68□□□□□ -0.22
SHKBP1-205ENST00000594973 IGSF10Q6WRI0 2623 aa13.67□□□□□ -0.22
SHKBP1-205ENST00000594973 IGLV2-23P01705 113 aa13.67□□□□□ -0.22
SHKBP1-205ENST00000594973 SLC35B1P78383 322 aa13.67□□□□□ -0.22
SHKBP1-205ENST00000594973 HIST1H1AQ02539 215 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-205ENST00000594973 GTF2H5Q6ZYL4 71 aa13.67□□□□□ -0.22
SHKBP1-205ENST00000594973 NDUFA4L2Q9NRX3 87 aa13.67□□□□□ -0.22
SHKBP1-205ENST00000594973 C22orf46C9J442 243 aa13.67□□□□□ -0.22
SHKBP1-205ENST00000594973 SAP30O75446 220 aa13.67□□□□□ -0.22
SHKBP1-205ENST00000594973 OR2J3O76001 311 aa13.67□□□□□ -0.22
SHKBP1-205ENST00000594973 FSTL3O95633 263 aa13.67□□□□□ -0.22
SHKBP1-205ENST00000594973 IGLV1-47P01700 117 aa13.67□□□□□ -0.22
SHKBP1-205ENST00000594973 IGFBP2P18065 325 aa13.67□□□□□ -0.22
SHKBP1-205ENST00000594973 TCL1AP56279 114 aa13.67□□□□□ -0.22
SHKBP1-205ENST00000594973 MLANAQ16655 118 aa13.67□□□□□ -0.22
SHKBP1-205ENST00000594973 OR1L8Q8NGR8 309 aa13.67□□□□□ -0.22
SHKBP1-205ENST00000594973 VSTM2AQ8TAG5 236 aa13.67□□□□□ -0.22
SHKBP1-205ENST00000594973 LOC102724200A0A096LPH7 203 aaPredicted RBP13.66□□□□□ -0.22
SHKBP1-205ENST00000594973 GAGE10A6NGK3 116 aa13.66□□□□□ -0.22
SHKBP1-205ENST00000594973 MC5RP33032 325 aa13.66□□□□□ -0.22
SHKBP1-205ENST00000594973 IBA57Q5T440 356 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-205ENST00000594973 UFSP1Q6NVU6 142 aa13.66□□□□□ -0.22
SHKBP1-205ENST00000594973 SPATA12Q7Z6I5 190 aa13.66□□□□□ -0.22
SHKBP1-205ENST00000594973 TMEM167AQ8TBQ9 72 aa13.66□□□□□ -0.22
SHKBP1-205ENST00000594973 MS4A6AQ9H2W1 248 aa13.66□□□□□ -0.22
SHKBP1-205ENST00000594973 ARHGAP32A7KAX9 2087 aa13.66□□□□□ -0.22
SHKBP1-205ENST00000594973 BUB1B-PAK6H3BSN5 160 aa13.65□□□□□ -0.22
SHKBP1-205ENST00000594973 RNASE2P10153 161 aaKnown RBP13.65□□□□□ -0.22
SHKBP1-205ENST00000594973 FXYD3Q14802 87 aa13.65□□□□□ -0.22
SHKBP1-205ENST00000594973 STPG3Q8N7X2 389 aa13.65□□□□□ -0.22
SHKBP1-205ENST00000594973 ITLN2Q8WWU7 325 aaPredicted RBP13.65□□□□□ -0.22
SHKBP1-205ENST00000594973 INSIG2Q9Y5U4 225 aa13.65□□□□□ -0.22
SHKBP1-205ENST00000594973 PLXNB1O43157 2135 aa13.65□□□□□ -0.22
SHKBP1-205ENST00000594973 NAV3Q8IVL0 2385 aa13.65□□□□□ -0.22
SHKBP1-205ENST00000594973 VMA21Q3ZAQ7 101 aa13.65□□□□□ -0.22
SHKBP1-205ENST00000594973 RNASEKQ6P5S7 137 aaKnown RBP13.65□□□□□ -0.22
SHKBP1-205ENST00000594973 UBTD1Q9HAC8 227 aa13.65□□□□□ -0.22
SHKBP1-205ENST00000594973 SCRT2Q9NQ03 307 aa13.65□□□□□ -0.22
SHKBP1-205ENST00000594973 TMEM167BQ9NRX6 74 aa13.65□□□□□ -0.22
SHKBP1-205ENST00000594973 LIPFP07098 398 aa13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 SCGB1A1P11684 91 aa13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 CNTFRP26992 372 aa13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 SEC11AP67812 179 aa13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 ERHP84090 104 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 WT1-ASQ06250 92 aa13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 RAB31Q13636 194 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms