RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 RPL27AP46776 148 aaKnown RBP13.19□□□□□ -0.3
LIG1-206ENST00000594067 FAM120AOSQ5T036 256 aa13.19□□□□□ -0.3
LIG1-206ENST00000594067 ETFRF1Q6IPR1 90 aa13.19□□□□□ -0.3
LIG1-206ENST00000594067 LINC00322Q6ZN03 302 aaPredicted RBP13.19□□□□□ -0.3
LIG1-206ENST00000594067 TMEM70Q9BUB7 260 aa13.19□□□□□ -0.3
LIG1-206ENST00000594067 LOC105371242A0A075B767 164 aa13.18□□□□□ -0.3
LIG1-206ENST00000594067 SH2D7A6NKC9 451 aaPredicted RBP13.18□□□□□ -0.3
LIG1-206ENST00000594067 KALRNO60229 2985 aa13.18□□□□□ -0.3
LIG1-206ENST00000594067 LGALS7P47929 136 aa13.18□□□□□ -0.3
LIG1-206ENST00000594067 ASCL5Q7RTU5 278 aa13.18□□□□□ -0.3
LIG1-206ENST00000594067 STXBP6Q8NFX7 210 aa13.18□□□□□ -0.3
LIG1-206ENST00000594067 OR2D3Q8NGH3 330 aa13.18□□□□□ -0.3
LIG1-206ENST00000594067 TMEM133Q9H2Q1 129 aa13.18□□□□□ -0.3
LIG1-206ENST00000594067 DMXL2Q8TDJ6 3036 aa13.18□□□□□ -0.3
LIG1-206ENST00000594067 ZGRF1Q86YA3 2104 aa13.18□□□□□ -0.3
LIG1-206ENST00000594067 PRSS33Q8NF86 280 aa13.18□□□□□ -0.3
LIG1-206ENST00000594067 TRGV9Q99603 122 aa13.18□□□□□ -0.3
LIG1-206ENST00000594067 TP73-AS1Q9UF72 201 aa13.18□□□□□ -0.3
LIG1-206ENST00000594067 ATMQ13315 3056 aa13.18□□□□□ -0.3
LIG1-206ENST00000594067 K7EP13 123 aa13.17□□□□□ -0.3
LIG1-206ENST00000594067 CRXO43186 299 aaPredicted RBP13.17□□□□□ -0.3
LIG1-206ENST00000594067 SSX8Q7RTT4 187 aa13.17□□□□□ -0.3
LIG1-206ENST00000594067 GPR82Q96P67 336 aa13.17□□□□□ -0.3
LIG1-206ENST00000594067 E7EQL1 145 aa13.17□□□□□ -0.3
LIG1-206ENST00000594067 CD24P25063 80 aa13.17□□□□□ -0.3
LIG1-206ENST00000594067 TEX45Q8NA69 505 aa13.17□□□□□ -0.3
LIG1-206ENST00000594067 C22orf15Q8WYQ4 148 aa13.17□□□□□ -0.3
LIG1-206ENST00000594067 ABHD17AQ96GS6 310 aa13.17□□□□□ -0.3
LIG1-206ENST00000594067 CUL9Q8IWT3 2517 aa13.17□□□□□ -0.3
LIG1-206ENST00000594067 IGHV2-70DA0A0C4DH43 119 aa13.16□□□□□ -0.3
LIG1-206ENST00000594067 M0QZ24 198 aa13.16□□□□□ -0.3
LIG1-206ENST00000594067 GFRALQ6UXV0 394 aa13.16□□□□□ -0.3
LIG1-206ENST00000594067 MLST8Q9BVC4 326 aa13.16□□□□□ -0.3
LIG1-206ENST00000594067 KAAG1Q9UBP8 84 aa13.16□□□□□ -0.3
LIG1-206ENST00000594067 KLF12Q9Y4X4 402 aa13.16□□□□□ -0.3
LIG1-206ENST00000594067 OR4C46A6NHA9 309 aa13.16□□□□□ -0.3
LIG1-206ENST00000594067 VSTM5A8MXK1 200 aa13.16□□□□□ -0.3
LIG1-206ENST00000594067 GP9P14770 177 aa13.16□□□□□ -0.3
LIG1-206ENST00000594067 FBLN7Q53RD9 439 aa13.16□□□□□ -0.3
LIG1-206ENST00000594067 FOXA3P55318 350 aaPredicted RBP13.16□□□□□ -0.3
LIG1-206ENST00000594067 HBBP68871 147 aa13.16□□□□□ -0.3
LIG1-206ENST00000594067 LINC00173Q6ZV60 143 aa13.16□□□□□ -0.3
LIG1-206ENST00000594067 TMEM116Q8NCL8 245 aa13.16□□□□□ -0.3
LIG1-206ENST00000594067 PRSS22Q9GZN4 317 aa13.16□□□□□ -0.3
LIG1-206ENST00000594067 Q9H3A6 140 aa13.16□□□□□ -0.3
LIG1-206ENST00000594067 RPP21Q9H633 154 aaKnown RBP13.16□□□□□ -0.3
LIG1-206ENST00000594067 ZNF835Q9Y2P0 537 aa13.16□□□□□ -0.3
LIG1-206ENST00000594067 SHISA9B4DS77 424 aa13.15□□□□□ -0.3
LIG1-206ENST00000594067 PVRIGQ6DKI7 326 aa13.15□□□□□ -0.3
LIG1-206ENST00000594067 GTSF1Q8WW33 167 aa13.15□□□□□ -0.3
LIG1-206ENST00000594067 C1RLQ9NZP8 487 aa13.15□□□□□ -0.3
LIG1-206ENST00000594067 SIGLEC9Q9Y336 463 aa13.15□□□□□ -0.3
LIG1-206ENST00000594067 GVINP1Q7Z2Y8 2422 aa13.15□□□□□ -0.3
LIG1-206ENST00000594067 LYNX1G3V0Z9 82 aa13.15□□□□□ -0.31
LIG1-206ENST00000594067 CRYGBP07316 175 aa13.15□□□□□ -0.31
LIG1-206ENST00000594067 LYNX1P0DP58 116 aa13.15□□□□□ -0.31
LIG1-206ENST00000594067 CA7P43166 264 aa13.15□□□□□ -0.31
LIG1-206ENST00000594067 JKAMPQ9P055 326 aa13.15□□□□□ -0.31
LIG1-206ENST00000594067 INSIG2Q9Y5U4 225 aa13.15□□□□□ -0.31
LIG1-206ENST00000594067 SYS1-DBNDD2H3BUS1 97 aa13.14□□□□□ -0.31
LIG1-206ENST00000594067 TOX4O94842 621 aa13.14□□□□□ -0.31
LIG1-206ENST00000594067 MPV17L2Q567V2 206 aa13.14□□□□□ -0.31
LIG1-206ENST00000594067 C5orf17Q8NAS9 161 aa13.14□□□□□ -0.31
LIG1-206ENST00000594067 SMIM12Q96EX1 92 aa13.14□□□□□ -0.31
LIG1-206ENST00000594067 PGLYRP4Q96LB8 373 aa13.14□□□□□ -0.31
LIG1-206ENST00000594067 IGHV1-24A0A0C4DH33 117 aa13.14□□□□□ -0.31
LIG1-206ENST00000594067 TCRAP04437 139 aa13.14□□□□□ -0.31
LIG1-206ENST00000594067 LYZP61626 148 aa13.14□□□□□ -0.31
LIG1-206ENST00000594067 FAM162BQ5T6X4 162 aa13.14□□□□□ -0.31
LIG1-206ENST00000594067 C8orf46Q8TAG6 207 aa13.14□□□□□ -0.31
LIG1-206ENST00000594067 ST20Q9HBF5 79 aa13.14□□□□□ -0.31
LIG1-206ENST00000594067 ANKRD11Q6UB99 2663 aaPredicted RBP13.14□□□□□ -0.31
LIG1-206ENST00000594067 IGHV1-3A0A0C4DH29 117 aa13.13□□□□□ -0.31
LIG1-206ENST00000594067 P01737 135 aa13.13□□□□□ -0.31
LIG1-206ENST00000594067 ANKRD39Q53RE8 183 aa13.13□□□□□ -0.31
LIG1-206ENST00000594067 Q8NA96 180 aa13.13□□□□□ -0.31
LIG1-206ENST00000594067 FBXL15Q9H469 300 aa13.13□□□□□ -0.31
LIG1-206ENST00000594067 TRAV8-1A0A0A6YYK1 113 aa13.13□□□□□ -0.31
LIG1-206ENST00000594067 hDV102S1A0JD36 115 aa13.13□□□□□ -0.31
LIG1-206ENST00000594067 A8MWL6 223 aa13.13□□□□□ -0.31
LIG1-206ENST00000594067 ABCA1O95477 2261 aa13.13□□□□□ -0.31
LIG1-206ENST00000594067 LTAP01374 205 aa13.13□□□□□ -0.31
LIG1-206ENST00000594067 COX7A1P24310 79 aa13.13□□□□□ -0.31
LIG1-206ENST00000594067 CHCHD1Q96BP2 118 aaKnown RBP13.13□□□□□ -0.31
LIG1-206ENST00000594067 FMC1Q96HJ9 113 aa13.13□□□□□ -0.31
LIG1-206ENST00000594067 HIGD1AQ9Y241 93 aa13.13□□□□□ -0.31
LIG1-206ENST00000594067 F11RQ9Y624 299 aaKnown RBP13.13□□□□□ -0.31
LIG1-206ENST00000594067 C19orf71A6NCJ1 209 aa13.12□□□□□ -0.31
LIG1-206ENST00000594067 TEX22C9J3V5 150 aa13.12□□□□□ -0.31
LIG1-206ENST00000594067 IGLV1-47P01700 117 aa13.12□□□□□ -0.31
LIG1-206ENST00000594067 PSG1P11464 419 aa13.12□□□□□ -0.31
LIG1-206ENST00000594067 Q71RC1 249 aaPredicted RBP13.12□□□□□ -0.31
LIG1-206ENST00000594067 PPP1R27Q86WC6 154 aa13.12□□□□□ -0.31
LIG1-206ENST00000594067 PIEZO2Q9H5I5 2752 aa13.12□□□□□ -0.31
LIG1-206ENST00000594067 LEPROTL1O95214 131 aa13.12□□□□□ -0.31
LIG1-206ENST00000594067 CDKN1BP46527 198 aa13.12□□□□□ -0.31
LIG1-206ENST00000594067 PRR30Q53SZ7 412 aaPredicted RBP13.12□□□□□ -0.31
LIG1-206ENST00000594067 OR4C5Q8NGB2 326 aa13.12□□□□□ -0.31
LIG1-206ENST00000594067 ACACAQ13085 2346 aa13.11□□□□□ -0.31
LIG1-206ENST00000594067 PRB4P10163 310 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms