RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 TEX48A0A1B0GUV7 120 aa17.07■□□□□ 0.32
LSM4-202ENST00000593564 SNRPGP15A8MWD9 76 aa17.07■□□□□ 0.32
LSM4-202ENST00000593564 ZNF79Q15937 498 aa17.07■□□□□ 0.32
LSM4-202ENST00000593564 OR4B1Q8NGF8 309 aa17.07■□□□□ 0.32
LSM4-202ENST00000593564 RAB2BQ8WUD1 216 aa17.07■□□□□ 0.32
LSM4-202ENST00000593564 DKK2Q9UBU2 259 aa17.07■□□□□ 0.32
LSM4-202ENST00000593564 ISLRO14498 428 aa17.06■□□□□ 0.32
LSM4-202ENST00000593564 PITX3O75364 302 aa17.06■□□□□ 0.32
LSM4-202ENST00000593564 PAX9P55771 341 aa17.06■□□□□ 0.32
LSM4-202ENST00000593564 SAMD13Q5VXD3 122 aa17.06■□□□□ 0.32
LSM4-202ENST00000593564 TRGV9Q99603 122 aa17.06■□□□□ 0.32
LSM4-202ENST00000593564 PKD1P98161 4303 aa17.05■□□□□ 0.32
LSM4-202ENST00000593564 DUXBA0A1W2PPF3 345 aa17.05■□□□□ 0.32
LSM4-202ENST00000593564 RTL8CO15255 209 aa17.05■□□□□ 0.32
LSM4-202ENST00000593564 RAB11AP62491 216 aa17.05■□□□□ 0.32
LSM4-202ENST00000593564 PSG9Q00887 426 aa17.05■□□□□ 0.32
LSM4-202ENST00000593564 OR2F1Q13607 317 aa17.05■□□□□ 0.32
LSM4-202ENST00000593564 LGALS9BQ3B8N2 356 aa17.05■□□□□ 0.32
LSM4-202ENST00000593564 OR8I2Q8N0Y5 310 aa17.05■□□□□ 0.32
LSM4-202ENST00000593564 PPP1R14BQ96C90 147 aa17.05■□□□□ 0.32
LSM4-202ENST00000593564 SOSTQ9BQB4 213 aa17.05■□□□□ 0.32
LSM4-202ENST00000593564 BCL7BQ9BQE9 202 aa17.05■□□□□ 0.32
LSM4-202ENST00000593564 NIPSNAP3BQ9BS92 247 aa17.05■□□□□ 0.32
LSM4-202ENST00000593564 SLC35B3Q9H1N7 401 aa17.05■□□□□ 0.32
LSM4-202ENST00000593564 GOLT1BQ9Y3E0 138 aa17.05■□□□□ 0.32
LSM4-202ENST00000593564 PRSS29PA6NIE9 313 aa17.04■□□□□ 0.32
LSM4-202ENST00000593564 M0R2N4 97 aa17.04■□□□□ 0.32
LSM4-202ENST00000593564 FAM222AQ5U5X8 452 aa17.04■□□□□ 0.32
LSM4-202ENST00000593564 EBLN2Q6P2I7 272 aa17.04■□□□□ 0.32
LSM4-202ENST00000593564 THAP8Q8NA92 274 aa17.04■□□□□ 0.32
LSM4-202ENST00000593564 IGKV1OR2-108A0A075B7D4 117 aa17.03■□□□□ 0.32
LSM4-202ENST00000593564 A0A0J9YX75 114 aa17.03■□□□□ 0.32
LSM4-202ENST00000593564 F6UB75 175 aa17.03■□□□□ 0.32
LSM4-202ENST00000593564 OXA1LQ15070 435 aa17.03■□□□□ 0.32
LSM4-202ENST00000593564 FAM78BQ5VT40 261 aa17.03■□□□□ 0.32
LSM4-202ENST00000593564 C1orf158Q8N1D5 194 aa17.03■□□□□ 0.32
LSM4-202ENST00000593564 IFNA21P01568 189 aa17.02■□□□□ 0.32
LSM4-202ENST00000593564 HBE1P02100 147 aa17.02■□□□□ 0.32
LSM4-202ENST00000593564 IAPPP10997 89 aa17.02■□□□□ 0.32
LSM4-202ENST00000593564 SLC25A6P12236 298 aa17.02■□□□□ 0.32
LSM4-202ENST00000593564 MEOX2P50222 304 aa17.02■□□□□ 0.32
LSM4-202ENST00000593564 TMBIM6P55061 237 aa17.02■□□□□ 0.32
LSM4-202ENST00000593564 GSG1LQ6UXU4 331 aa17.02■□□□□ 0.32
LSM4-202ENST00000593564 SLIRPQ9GZT3 109 aaKnown RBP17.02■□□□□ 0.32
LSM4-202ENST00000593564 RPRMQ9NS64 109 aa17.02■□□□□ 0.32
LSM4-202ENST00000593564 FABP12A6NFH5 140 aa17.01■□□□□ 0.31
LSM4-202ENST00000593564 CFDP00746 253 aaPredicted RBP17.01■□□□□ 0.31
LSM4-202ENST00000593564 TNFSF8P32971 234 aa17.01■□□□□ 0.31
LSM4-202ENST00000593564 FAUP35544 74 aaKnown RBP17.01■□□□□ 0.31
LSM4-202ENST00000593564 TMEM128Q5BJH2 165 aa17.01■□□□□ 0.31
LSM4-202ENST00000593564 UBE2DNLQ8IWF7 75 aa17.01■□□□□ 0.31
LSM4-202ENST00000593564 LRTM2Q8N967 370 aa17.01■□□□□ 0.31
LSM4-202ENST00000593564 C7orf50Q9BRJ6 194 aaKnown RBP17.01■□□□□ 0.31
LSM4-202ENST00000593564 SLC45A2Q9UMX9 530 aa17.01■□□□□ 0.31
LSM4-202ENST00000593564 LOC102723971A0A1B0GUV8 181 aa17■□□□□ 0.31
LSM4-202ENST00000593564 MED14OSP0DP75 135 aa17■□□□□ 0.31
LSM4-202ENST00000593564 GALR1P47211 349 aa17■□□□□ 0.31
LSM4-202ENST00000593564 GGNBP1Q5YKI7 109 aa17■□□□□ 0.31
LSM4-202ENST00000593564 TMED4Q7Z7H5 227 aa17■□□□□ 0.31
LSM4-202ENST00000593564 C16orf92Q96LL3 132 aa17■□□□□ 0.31
LSM4-202ENST00000593564 C20orf173Q96LM9 149 aa17■□□□□ 0.31
LSM4-202ENST00000593564 DOK5Q9P104 306 aa17■□□□□ 0.31
LSM4-202ENST00000593564 PAIP2BQ9ULR5 123 aaKnown RBP17■□□□□ 0.31
LSM4-202ENST00000593564 YTHDF2Q9Y5A9 579 aaKnown RBP17■□□□□ 0.31
LSM4-202ENST00000593564 A8MTW9 85 aa16.99■□□□□ 0.31
LSM4-202ENST00000593564 MED6O75586 246 aa16.99■□□□□ 0.31
LSM4-202ENST00000593564 RRN3P1Q2M238 152 aa16.99■□□□□ 0.31
LSM4-202ENST00000593564 Q6ZR54 194 aa16.99■□□□□ 0.31
LSM4-202ENST00000593564 CIB3Q96Q77 187 aaPredicted RBP16.99■□□□□ 0.31
LSM4-202ENST00000593564 SLC25A32Q9H2D1 315 aa16.99■□□□□ 0.31
LSM4-202ENST00000593564 PLA2G2EQ9NZK7 142 aa16.99■□□□□ 0.31
LSM4-202ENST00000593564 ZNF98A6NK75 572 aa16.98■□□□□ 0.31
LSM4-202ENST00000593564 PRSS46E5RG02 174 aa16.98■□□□□ 0.31
LSM4-202ENST00000593564 RPP30P78346 268 aaKnown RBP16.98■□□□□ 0.31
LSM4-202ENST00000593564 C17orf77Q96MU5 243 aa16.98■□□□□ 0.31
LSM4-202ENST00000593564 HTN3P15516 51 aa16.97■□□□□ 0.31
LSM4-202ENST00000593564 VAMP1P23763 118 aa16.97■□□□□ 0.31
LSM4-202ENST00000593564 RNF212Q495C1 297 aa16.97■□□□□ 0.31
LSM4-202ENST00000593564 AMTNQ6UX39 209 aa16.97■□□□□ 0.31
LSM4-202ENST00000593564 OR4D5Q8NGN0 318 aa16.97■□□□□ 0.31
LSM4-202ENST00000593564 TRIM63Q969Q1 353 aa16.97■□□□□ 0.31
LSM4-202ENST00000593564 IGF2BP2-AS1Q96M15 143 aa16.97■□□□□ 0.31
LSM4-202ENST00000593564 RSG1Q9BU20 258 aa16.97■□□□□ 0.31
LSM4-202ENST00000593564 MAGT1Q9H0U3 335 aa16.97■□□□□ 0.31
LSM4-202ENST00000593564 SLC25A22Q9H936 323 aa16.97■□□□□ 0.31
LSM4-202ENST00000593564 TMED3Q9Y3Q3 217 aa16.97■□□□□ 0.31
LSM4-202ENST00000593564 IGLV2-18A0A075B6J9 118 aa16.96■□□□□ 0.31
LSM4-202ENST00000593564 AP3S2P59780 193 aa16.96■□□□□ 0.31
LSM4-202ENST00000593564 SYNGR2O43760 224 aa16.95■□□□□ 0.3
LSM4-202ENST00000593564 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.95■□□□□ 0.3
LSM4-202ENST00000593564 TOMM5Q8N4H5 51 aa16.95■□□□□ 0.3
LSM4-202ENST00000593564 BPIFCQ8NFQ6 507 aa16.95■□□□□ 0.3
LSM4-202ENST00000593564 OR1B1Q8NGR6 318 aa16.95■□□□□ 0.3
LSM4-202ENST00000593564 MCFD2Q8NI22 146 aa16.95■□□□□ 0.3
LSM4-202ENST00000593564 GPR82Q96P67 336 aa16.95■□□□□ 0.3
LSM4-202ENST00000593564 H3BMQ9 156 aa16.94■□□□□ 0.3
LSM4-202ENST00000593564 NOL3O60936 208 aaKnown RBP16.94■□□□□ 0.3
LSM4-202ENST00000593564 SFT2D2O95562 160 aa16.94■□□□□ 0.3
LSM4-202ENST00000593564 S100A7P31151 101 aa16.94■□□□□ 0.3
LSM4-202ENST00000593564 DAD1P61803 113 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms